Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2395 ATGTCGCCGGTTGATTCTTCGAGGGAGGAAAACGTTTACATGGCCAAGTTGGCCGAACAGGCTGAACGATATGAGGAAATGGTGGAGTTCATGGAGAAAGTTGCCAAGACTGTGGATGTCGAGGAGCTGACTGTTGAGGAGAGGAATCTCCTATCTGTTGCTTACAAGAATGTTATCGGGGCTCGGAGGGCCTCGTGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGGGGAAATGAGGACCATGTTTCAGTTATCAAGGAGTACCGTGGCAAGATCGAAAATGAGTTGAGCAAGATCTGTGATGGGATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCAAAGGTGTTTTATCTCAAAATGAAGGGTGATTACCACAGGTACCTGGCCGAGTTTAAGACTGGATCTGAGAGGAAGGAAGCAGCTGAGAGCACGTTATTAGCCTACAAGTCTGCTCAGGATATTGCACTTGCTGAATTGGCTCCTACTCATCCAATTAGGCTCGGTCTCGCTCTTAACTTCTCAGTATTTTATTATGAGATCCTTAACTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGATGAAGCAATTTCTGAACTTGACACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATATAACGGATGATGCTGGAGATGAGATTAAGGAAGCATCAAAACGCGAATCAGGGGAGGGACAGTAG 786 46.31 MSPVDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRGKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGSERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKEASKRESGEGQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27032396 27035745 + MC08g1879 Mch8g2395 696016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2395 261 SMART 1433_4 8 251 IPR023410 -
Mch8g2395 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Mch8g2395 261 PIRSF 14-3-3 3 250 IPR000308 -
Mch8g2395 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Mch8g2395 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Mch8g2395 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Mch8g2395 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Mch8g2395 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Mch8g2395 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Mch8g2395 261 Coils Coil 14 34 - -
Mch8g2395 261 FunFam 14-3-3 protein epsilon 4 251 - -
Mch8g2395 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Mch8g2395 261 PANTHER 14-3-3 PROTEIN 7 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Mch8g2395 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Mch8g2395 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Mch8g2395 261 Gene3D - 2 251 IPR036815 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0676 Mch-Chr11:4418215 Mch8g2395 Mch-Chr8:27032396 1.29E-150 dispersed
Mch8g0290 Mch-Chr8:2009044 Mch8g2395 Mch-Chr8:27032396 4.60E-124 dispersed
Mch8g2395 Mch-Chr8:27032396 Mch9g2079 Mch-Chr9:21845413 1.20E-117 dispersed
Mch8g2395 Mch-Chr8:27032396 Mch8g0225 Mch-Chr8:1504843 6.92E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2395 K06630 - rcu:8261199 494.197