Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2403 ATGGGGGAGTGTGGGTGTTTGGTTTCAGAGCTTGGAGGAGAGAAACAGCTCATTGCTGCTGCTAATTTCATTATTAAGGCTTTAGGTTCTGACATAACCATTTCAGATGATGCAAAGAAGGTTTTGGCCGATCTTTGCACAGAGTTATCTTTAGTTGTTTCACGGAATCAGCGAGCCGATGTTGTCGAAATCGAAGTCGAGGGGACGGAGATTGGGGAAGTTGAAGAGATTGAGAGTAGGCTTAAAGTAGTGCAGGAGAAAATCATGGTTTGGGAAGCAGATCAGTCCATGATATGGGACTCTGCTGCTCCGGATGATGCTTCGGAGTATCTGAACGCTGCAGATGAAGCCCGGGAATTGGTTAGCAAGTTGGAGGGTTTGTGTTTGAGTAAAGATGAAGGAGATTTTGAACTGTCGAGGAAGGCGCACGATGTTCTTCAAACGGCTATGGCAAGGCTTGAGGAAGAGTTTAGGCACTTGCTTGCTAGAAGTAGCCTTGAATTTCAGCTTGAGAGTGTGTCTGTGCACTCCACGGAAGATGCTGTGGATGATGGATCGACACACTTATATCGAGATGAATCGTTTGAGGCTTCGGTTCGGAGTAGTAGTGTTGGCAGAAACTTGGAGAATTCTATCATCGATTTGGTCAACCCAGATGCGGTTTGTGAGCTCATGGGCATAGCAAATGTCATGTTCAAGTCTGGTTATGATCAGGAGTGCATCCAGGCTTACAATCATCTTCGTCGGGACGCTTTAAATGAGTGCCTCTTGACTCTTGAAATGGAGAAAATGAGCATTGAGGATGTGCTGAAAATGGATTGGGTTACCTTGAACTCGAAGATCAGGAAATGGAACCGAGCAATGAAGCGATTCGTGCGGGTCTATCTACCTAGCGAAAAATGCCTTTGTGATCAAATTTTTGGGGAGGAAGGATCGGTTAGTTTGACTTGTTTTGTTGAATCATCAAAGGCATCAATGCTGCAATTTCTGAACTTTGGCGAGGCCATGGCCATAGGCCCTCATACACCAGAAAAATTGAATCGCATTCTCGAAATGTATGAGGTCGTTGAAGAGCTTCTCTCGGATATCGATGCGTTATACTGTGATGAAGTTGGTTATCATGTTAGGATTGAGTATCATGATGTTCAAAAGAGTCTAGGACATTCTGTGAGAGCTACATTTCTCGAGTTCGGGAAAGCTATTGCGGCAAACACGTCACCGCACCCGTTTGCAGGCGGTGGAATCCATCATCTAACCAAATACGTGATGAATTACCTTATGATTCTTACTGATTATAGCGAATCCCTGAATTTTCTCCTCAAGGATGGAGAAGATATGTATCCCATTTCACCATCATGCTCTATGAATTCAAGTAGAGAAAGAGAAGAAGAAAGCGAAAGCAGAGGTTCGTGTTCAGGCGAGTTCTCCCCGATGGCTCGCCATTTTCGTTCGGTTGCTACAATTCTAGAGAATAACCTCGAGGAGAAGTCGAAGCAGTACAAAGATGCTGCTCTACAGCAATTCTTCTTGATGAACAACATACATTACATGGCTCAAAAGGTGAGGGGTTCGGAGCTTAGCCAGATATTCGGGGAGGATTGGATTCGTAAACACTACGGGAAGTTCCAGCAGCAGGCGATGAACTACGAGAGGGCTAGTTGGAATTCAATACTCTCATACCTTCGGGAGGATCCCGGTTCTAATTCGGAGTCGAAAAACGTGCTGAAAGAGAGGTTGCGCAGCTTCAATGTTGCTTTCGAGGAGATTTACAAAACCCAAACCTCGTGGATCATTCACGACTCTCGGCTTCGTGAAGATCTGCGGATCTCGACGTCGCTGAGGGTGATCCATGCATATAGAGCATTCTTTGGAAGGTGTAATAACCATGTAAGTGACAAGCTTATCAAGTACAGTCCAGATGATTTGGAGGGTTACCTTCTTGATCTCTTTGAGGGATCTCCAAAATCATTGCCCAACACCAATAGGAGGTGA 1992 45.08 MGECGCLVSELGGEKQLIAAANFIIKALGSDITISDDAKKVLADLCTELSLVVSRNQRADVVEIEVEGTEIGEVEEIESRLKVVQEKIMVWEADQSMIWDSAAPDDASEYLNAADEARELVSKLEGLCLSKDEGDFELSRKAHDVLQTAMARLEEEFRHLLARSSLEFQLESVSVHSTEDAVDDGSTHLYRDESFEASVRSSSVGRNLENSIIDLVNPDAVCELMGIANVMFKSGYDQECIQAYNHLRRDALNECLLTLEMEKMSIEDVLKMDWVTLNSKIRKWNRAMKRFVRVYLPSEKCLCDQIFGEEGSVSLTCFVESSKASMLQFLNFGEAMAIGPHTPEKLNRILEMYEVVEELLSDIDALYCDEVGYHVRIEYHDVQKSLGHSVRATFLEFGKAIAANTSPHPFAGGGIHHLTKYVMNYLMILTDYSESLNFLLKDGEDMYPISPSCSMNSSREREEESESRGSCSGEFSPMARHFRSVATILENNLEEKSKQYKDAALQQFFLMNNIHYMAQKVRGSELSQIFGEDWIRKHYGKFQQQAMNYERASWNSILSYLREDPGSNSESKNVLKERLRSFNVAFEEIYKTQTSWIIHDSRLREDLRISTSLRVIHAYRAFFGRCNNHVSDKLIKYSPDDLEGYLLDLFEGSPKSLPNTNRR 663
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 27097657 27100161 + MC08g1886 Mch8g2403 696024
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2403 663 Coils Coil 74 94 - -
Mch8g2403 663 Gene3D Exocyst complex component Exo70 86 660 - -
Mch8g2403 663 Pfam Exo70 exocyst complex subunit C-terminal 283 648 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Mch8g2403 663 Coils Coil 143 163 - -
Mch8g2403 663 Pfam Exocyst complex component Exo70 N-terminal 81 162 - -
Mch8g2403 663 Coils Coil 486 506 - -
Mch8g2403 663 MobiDBLite consensus disorder prediction 451 473 - -
Mch8g2403 663 PANTHER EXOCYST COMPLEX PROTEIN EXO70 70 653 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Mch8g2403 663 SUPERFAMILY Cullin repeat-like 90 651 IPR016159 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1694 Mch-Chr3:18525102 Mch8g2403 Mch-Chr8:27097657 2.38E-161 dispersed
Mch8g0626 Mch-Chr8:4514228 Mch8g2403 Mch-Chr8:27097657 5.67E-37 dispersed
Mch8g2403 Mch-Chr8:27097657 Mch9g1872 Mch-Chr9:20415757 7.52E-78 dispersed
Mch8g2403 Mch-Chr8:27097657 Mch3g1347 Mch-Chr3:16160475 1.62E-137 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2403 K07195 - csv:101204348 1045.42