Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2467 ATGGGGTCCTGCTTGTCTGCGGAGAGCAGGAGCCCCCTTCCTGGATCCCCAACCTCTCCGGCCTTGGGTTCCGGGAAGAACCGCAAGAACTCCAGGCGACGAAACTCTTCCCGGAATTCGTCGTTCGGCGATCTCCCGCTGCATCAGCTTCCGGGGCGCCTCTGCCTCAATGGCTTCAGTGATGTCGCCTCTCTGTTCACGCAGCAGGGCAAGAAGGGGACCAATCAAGATGCCATGATTGTTTGGGAGAATTTTGGCTCTCGAACTGACACAATATTCTGTGGGGTTTTCGATGGCCACGGCCCCTACGGTCATATGGTTGCAAAGAAAGTTCGGGATTCTCTTCCTCTCAGGCTGAGTGCACATTGGGAGGTCAACTTGACCACGGATGATGTTCTTAAAGAGATCAGCCTTAACACTGGAAGCATTAACTCGGACGAAGCTACCTCCTTTTTATCTGCTGATGAAGAGTTTAGGGCCTCCACTGATGTTGATGGAACAGAAAAGCAACCTGAAATTTTCCATACTTTGAGGGATTCATTTTTCAAGGCTTTTAAAGTTATGGACAGGGAACTAAGAATGCACCAGACTATAGATTGCTTCTGTAGTGGGACTACAGCAGTGACTATGGTGAAGCAGGGCCAGGATCTTGTCATCGGAAATGTTGGGGACTCGCGAGCTGTTTTGGGTACGAGAGATACAGACGGCTCTCTTGTTGCAATTCAATTGACGGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAAGTGTAAAGGTCGTGTCTTTGCTCTCCAAGATGAACCTGATGTTCCTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTCGCCATGGCACGAGCATTTGGAGATTTCTGTCTCAAAGACTTTGGTCTTATCTCCGTACCTGAAATATCATATAGACGGCTCACTGAAAAAGACAAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTGCTGTCGAACAAAGAGGTTGTAGATATTGTTGCATCAGCTCCAAAACGCACCACCGCAGCTCGAACCCTGGTCGAGACAGCCGTTAAAGCATGGAAATATAAATACCCAACTTCCAAGATCGACGACTGTGCGGTGGTTTGCCTCTTCCTCGACTCAAACTCCAGCACTTTATCATCTGCTTCCAATGCCAAGTCAGAAGAGCAACATACTACATCAGCAGATCAAGTGATCAGCAGTGCAGTTGAGAACGAAGATCTTTCTGGCCTCAATGGTCTGATTCGGTCGGGAACTGTCCGAACGAGCAAGGAAATTCTGCAGGATGGGAGCGAAGAAGAAGATGAATTTAAGGAGGAAGAACATTATGAGGTGGGAATAGAATGGTCCGCCCTTGAAGGAGTCTCACGCGTGAACACTTTGGTGAACCTGCCGAGATTCGATCCTGGAAAAGAAGAGAAGAAAGGGCGGAAGTAA 1464 48.57 MGSCLSAESRSPLPGSPTSPALGSGKNRKNSRRRNSSRNSSFGDLPLHQLPGRLCLNGFSDVASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVLKEISLNTGSINSDEATSFLSADEEFRASTDVDGTEKQPEIFHTLRDSFFKAFKVMDRELRMHQTIDCFCSGTTAVTMVKQGQDLVIGNVGDSRAVLGTRDTDGSLVAIQLTVDLKPNLPAEAERIRKCKGRVFALQDEPDVPRVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDKFIVLATDGIWDVLSNKEVVDIVASAPKRTTAARTLVETAVKAWKYKYPTSKIDDCAVVCLFLDSNSSTLSSASNAKSEEQHTTSADQVISSAVENEDLSGLNGLIRSGTVRTSKEILQDGSEEEDEFKEEEHYEVGIEWSALEGVSRVNTLVNLPRFDPGKEEKKGRK 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27594408 27598526 - MC08g1943 Mch8g2467 696088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2467 487 Gene3D - 61 384 IPR036457 -
Mch8g2467 487 MobiDBLite consensus disorder prediction 1 26 - -
Mch8g2467 487 SMART PP2C_4 51 379 IPR001932 -
Mch8g2467 487 PANTHER PROTEIN PHOSPHATASE 39 380 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch8g2467 487 FunFam probable protein phosphatase 2C 33 57 384 - -
Mch8g2467 487 ProSiteProfiles PPM-type phosphatase domain profile. 62 381 IPR001932 -
Mch8g2467 487 MobiDBLite consensus disorder prediction 1 45 - -
Mch8g2467 487 SUPERFAMILY PP2C-like 61 382 IPR036457 -
Mch8g2467 487 CDD PP2Cc 62 381 IPR001932 -
Mch8g2467 487 Pfam Protein phosphatase 2C 177 360 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1456 Mch-Chr10:14397752 Mch8g2467 Mch-Chr8:27594408 1.15E-161 dispersed
Mch2g0574 Mch-Chr2:4009574 Mch8g2467 Mch-Chr8:27594408 7.21E-137 dispersed
Mch6g1401 Mch-Chr6:12315767 Mch8g2467 Mch-Chr8:27594408 5.18E-185 dispersed
Mch7g0184 Mch-Chr7:2298077 Mch8g2467 Mch-Chr8:27594408 2.74E-162 dispersed
Mch7g1205 Mch-Chr7:15686081 Mch8g2467 Mch-Chr8:27594408 4.29E-106 dispersed
Mch8g2467 Mch-Chr8:27594408 Mch8g2798 Mch-Chr8:30983631 1.09E-112 dispersed
Mch8g2467 Mch-Chr8:27594408 Mch4g0169 Mch-Chr4:1134981 4.85E-144 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2467 - - - 0.0