Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2582 ATGTTGGAGGGTGGTCAAAAATTCACTGGAATGATCGATTTAAACGAGCATGCATATGATCTATCGCAAGGGTTTTACCATAAACTTGGTGAGGGAACCAACATGTCTATTGACAGCTTTGCAAGCTTGCAAACAAGCAATGATGGAGGGTCGGTTGCCATGTCTTTAGATAACAGCAGTGTAGGATCAAATGAATCCCATACTCGCATCCTAAATCACCAAGGCTTGCGACGGCGTGCAAACGACAATTATACTGTTCAGCAGAGCATTAACCGTCGTGGAAGAGTTACACATCACCTGAGTGATGATGCACTAGCCCGAGCCCTATTTGATAGTAATACACCCACCCAGGGTCTTGAAAATTTCGAGAAGTGGACTCTTGATTTAAGGAAACTTAATATGGGAGAGGCTTTTGCTCAAGGTGCTTTTGGAAAACTCTACAGAGGTACTTATGATGGCGAAGATGTTGCTATCAAGATCTTGGAGAGGCCAGAGAATGACCTGGAAAAGGCTCAGTTAATGGAGCAACAATATCAGCAGGAGGTGATGATGCTTGCTACTTTGAAGCATCCAAATATTGTCCGGTTTATTGGCTCATGTCATAAGCCGATGGTTTGGTGCATTGTTACCGAATATGCAAAGGGTGGTTCGGTCAGGCAGTTCTTAATGAAGCGACAAAGTCGCTCTGTCCCTCTGAAATTAGCTGTCAAGCAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCACGGCCTTGGGTTGATCCACAGGGACCTGAAATCGGACAACCTTTTGATTTTTGGAGATAAGTCTATCAAGGTTGCTGACTTTGGGGTGGCCCGAATTGAGGTGCAGACAGAGGGAATGACACCCGAGACGGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACCCAGAAGGTGGACTTGTACAGCTTTGGCATTGTTCTCTGGGAGCTCATCACTGGAATGCTTCCATTCCAGAACATGACAGCCGTGCAAGCCGCTTTTGCGGTCGTCAACAAGGGAGTCCGTCCTATAATACCTAATGACTGCTTACCTGTTTTGAGCGACATCATGACCCGGTGCTGGGATGCCAACCCTGATGTTAGGCCATCGTTTACCGAGGTCGTCCGGATGCTCGAGAATGCACAGACTGAGATCATGACAACCGTCCGTAAGGCCCGCTTCAGGTGTTGCATCACGCAGCCAATGACAACAGACTGA 1242 47.58 MLEGGQKFTGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNYTVQQSINRRGRVTHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDLEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFGDKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFTEVVRMLENAQTEIMTTVRKARFRCCITQPMTTD 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28960626 28971459 + MC08g_new0542 Mch8g2582 696203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2582 413 Gene3D Transferase(Phosphotransferase) domain 1 215 408 - -
Mch8g2582 413 PANTHER SERINE-THREONINE PROTEIN KINASE 75 388 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch8g2582 413 FunFam Serine/threonine-protein kinase isoform 1 122 214 - -
Mch8g2582 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2582 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2582 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2582 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2582 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2582 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2582 413 ProSiteProfiles Protein kinase domain profile. 132 393 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2582 413 SMART serkin_6 132 394 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2582 413 FunFam serine/threonine-protein kinase HT1 215 408 - -
Mch8g2582 413 CDD STKc_MAP3K-like 139 386 - -
Mch8g2582 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2582 413 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
Mch8g2582 413 SUPERFAMILY Protein kinase-like (PK-like) 117 386 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1800 Mch-Chr10:17693023 Mch8g2582 Mch-Chr8:28960626 1.34E-81 dispersed
Mch3g1453 Mch-Chr3:16850732 Mch8g2582 Mch-Chr8:28960626 8.48E-98 dispersed
Mch4g1871 Mch-Chr4:21411785 Mch8g2582 Mch-Chr8:28960626 6.72E-78 dispersed
Mch5g0551 Mch-Chr5:3708855 Mch8g2582 Mch-Chr8:28960626 8.28E-20 dispersed
Mch6g0114 Mch-Chr6:665767 Mch8g2582 Mch-Chr8:28960626 1.29E-56 dispersed
Mch8g1464 Mch-Chr8:10974363 Mch8g2582 Mch-Chr8:28960626 3.17E-71 dispersed
Mch8g2582 Mch-Chr8:28960626 Mch9g0894 Mch-Chr9:6914541 1.27E-69 dispersed
Mch8g2582 Mch-Chr8:28960626 Mch1g1718 Mch-Chr1:17777500 1.09E-94 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77631 PF07714 PK_Tyr_Ser-Thr 5.50E-65 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2582 - - - 0.0