Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2590 ATGGCGAGAGGAGGAGGTCAGAAGAAGGAGGAATCGGTGGCGGTGGCGGTCGACAAAGACAAAGGAAGCCAATACGCTTTGAAATGGGCCATGGATCGGCTTCTCACCAAAGGCCAGGCTCTCACTCTGCTTCACGTCAAACAGAGACCCTCCTCCGCCGCGAATTCCATGCCGAATCTCAGCGCAAATTCCGACTCCGATGAGGCTTCCACGTACAAACAGCAGCAGACCGATAATCAAGCCAGAGAATTCTTCCTCCCCTTTCGTTGCTTGTGCACCAGAAGAAATATACAATGCAATGAGGTGATATTGGAGGATGCAGATATTGCAAAAACATTAATCAACTATGTCTCAAAAAACCGTATAGACATTTTAGTTCTTGGTGTCCCCTCAAGGAGTGGACTTTACAGGAGATTCAAATATTCCCCCGATGTTCCTAGCAGTGTGTCAAAAGGAGCACCTGAATTCTGCACAATTTACGTTATTAACAAAGGCAACAAGGTTTCTTCGATGCGGCAGTCCACCGCCCCAGCGCCAGCAAAGACCATTCCTCAGCGCAGCCAATCGCAACTTCAGCCCGTCTCCTCCGCTGGCCCCCCACCCCGCCCTCAGCTGCAGTATCAGCTCACCACCGCCTCTGACGTTGCGGCCGAGCCCAACCATCTTCGCTCCCAACAATCTAAATACATGGAGCCTCCGGAGAGCATAACACCAACTCCTCGGTCCATGTACTCCGATGATTTTGAAATCAAATCACCATTTATGAGACCCGGTTCAAAGGCCACAATGAGCAAAGGACTAGATCCATTGGTACTAGATTCTGACATATCGTACGTGAGTAATGGGAGGCGGAGTGTGGACCGAGCATTTCCACCAGCCTGGAGCTCTGGTGGCAGCGACATGTCCCGGTTTTCGAATGGGTCGGATTTAGAGATTTACAGCCCCGGTTCGAGTTCGCCTTTCTACGGCGGCCGGAAGTCCATTGACAATAATGCCTCCCACTCCCCTCTGGCTCAGGATCTGTCCTCCAGCTCCCAAGAAAGCGAAACCTTCTCTTGGCCTTCCTCTTCTCAGCCCCAGGATGATGTGGAAGCTGAGATGAGGAGGCTGAAATTGGAGCTCAAACAAACAATGGACATGTACAGTACGGCCTGCAAAGAAGCCCTAAACGCCAAGCAAAAGGCGAACGAGCTCCACCGCTGGAAGCTTGAAGAAGAGCACAGATTAGAAGAGGCGAGAATGGCGGAGGGAGCCGCGTTGGCGATCGCAGAGAAGGAGAAGGTCAAATGCAGAGCGGCAATGGAGGCAGCCGAAGCCGCGCAGAGGATCGCGGCGCTCGAGTCCAGGAAAAGAGCGACCGCAGAGAAGATGGCGGACATGGAAGCAGAGGAGACGAAGAAGGCGCTTGCAGGATTCGGCCATGGCGAACTTGGATACAGAAGGTACACAATCGAGGAAATCGAAACGGCCACCAACGGCTTCTCTGATGCTCTCAAGATCGGCGAGGGAGGCTACGGTCCGGTGTACAGAGGAGAGCTCGACCACACGCCGGTGGCGATTAAGGTTCTCCGGCCGGATGCGGCGCAAGGCCGGTCGCAGTTTCAGCAAGAGGTTGAGGTTTTGAGCTGTATTAGACATCCGAATATGGTGCTTCTTCTCGGAGCCTGTCCGGAGAATGGTTGCTTAGTTTACGAATTCATGGCGAACGGAAGCTTAGAGGACTGTCTGTTCCGTAAAGGCGACGACCCGGTTCTTCCATGGCAATTAAGGTTCCGAATCGCGGCGGAGATCGCCACCGGACTTCTCTTCCTCCACCAAACCAGACCAGAGCCGATAGTGCATCGCGATCTGAAACCGGGGAACATTCTGCTGGATCGGAATTACGTGAGCAAAATCAGCGACGTCGGACTAGCGAGGCTTGTTCCTCCGTCGGTCGCCGATTCAGTGACTCAGTACCGGATGACGGCGACGGCGGGGACTTTCTTCTACATCGATCCGGAGTACCAGCAAACAGGATTGCTCGGAATCAAATCGGACATTTACTCGCTCGGAGTGATGCTCCTGCAAATAATCACATCTCGGCCGCCGATCGGACTGGCGCACGTCGTGGAGAGGGCGATCGAGAAGGGGAAATTTGAGGAGATGCTGGATCCGGATGTGAAGGACTGGCCGGTTGAGGAAGCTCTAAAATTCGCGAAACTGTCGATTCAGTGCGCGGAGATGAGGAAGAGGGATCGGCCGGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGATTGAGAACGATCGCGGAAGAGAGCATGGGAATCCGGCCGTTCAACTGTAGTGCGTCGGATTCGTCATCGCCATCTACAAGCCAGGCTTCATCTTCTCAAGAAGCCATAAGTTTACATCAAGTGCATTGTGGATCATGGGTTGACAGCCCAAACAGCCAATCAGGAAGCAGCACGTCATCGCTTTCAGGCAGACGGCCTTACTGGCTGGATTAA 2490 53.45 MARGGGQKKEESVAVAVDKDKGSQYALKWAMDRLLTKGQALTLLHVKQRPSSAANSMPNLSANSDSDEASTYKQQQTDNQAREFFLPFRCLCTRRNIQCNEVILEDADIAKTLINYVSKNRIDILVLGVPSRSGLYRRFKYSPDVPSSVSKGAPEFCTIYVINKGNKVSSMRQSTAPAPAKTIPQRSQSQLQPVSSAGPPPRPQLQYQLTTASDVAAEPNHLRSQQSKYMEPPESITPTPRSMYSDDFEIKSPFMRPGSKATMSKGLDPLVLDSDISYVSNGRRSVDRAFPPAWSSGGSDMSRFSNGSDLEIYSPGSSSPFYGGRKSIDNNASHSPLAQDLSSSSQESETFSWPSSSQPQDDVEAEMRRLKLELKQTMDMYSTACKEALNAKQKANELHRWKLEEEHRLEEARMAEGAALAIAEKEKVKCRAAMEAAEAAQRIAALESRKRATAEKMADMEAEETKKALAGFGHGELGYRRYTIEEIETATNGFSDALKIGEGGYGPVYRGELDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPENGCLVYEFMANGSLEDCLFRKGDDPVLPWQLRFRIAAEIATGLLFLHQTRPEPIVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFFYIDPEYQQTGLLGIKSDIYSLGVMLLQIITSRPPIGLAHVVERAIEKGKFEEMLDPDVKDWPVEEALKFAKLSIQCAEMRKRDRPDLGKVVLPELNRLRTIAEESMGIRPFNCSASDSSSPSTSQASSSQEAISLHQVHCGSWVDSPNSQSGSSTSSLSGRRPYWLD 829
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29058551 29065299 - MC08g2048 Mch8g2590 696211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2590 829 CDD STKc_IRAK 500 760 - -
Mch8g2590 829 MobiDBLite consensus disorder prediction 774 829 - -
Mch8g2590 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2590 829 ProSiteProfiles Protein kinase domain profile. 494 757 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2590 829 MobiDBLite consensus disorder prediction 324 363 - -
Mch8g2590 829 Gene3D HUPs 11 152 IPR014729 -
Mch8g2590 829 MobiDBLite consensus disorder prediction 49 74 - -
Mch8g2590 829 Pfam Universal stress protein family 13 139 IPR006016 -
Mch8g2590 829 SMART serkin_6 494 757 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2590 829 MobiDBLite consensus disorder prediction 171 205 - -
Mch8g2590 829 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 468 566 - -
Mch8g2590 829 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 12 139 - -
Mch8g2590 829 MobiDBLite consensus disorder prediction 324 361 - -
Mch8g2590 829 FunFam Os07g0541700 protein 567 657 - -
Mch8g2590 829 Pfam Protein kinase domain 498 747 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2590 829 PANTHER OS02G0152300 PROTEIN 13 792 IPR051348 -
Mch8g2590 829 Gene3D Phosphorylase Kinase; domain 1 476 566 - -
Mch8g2590 829 Coils Coil 360 380 - -
Mch8g2590 829 Gene3D Transferase(Phosphotransferase) domain 1 567 771 - -
Mch8g2590 829 MobiDBLite consensus disorder prediction 774 823 - -
Mch8g2590 829 MobiDBLite consensus disorder prediction 220 242 - -
Mch8g2590 829 SUPERFAMILY Protein kinase-like (PK-like) 477 753 IPR011009 -
Mch8g2590 829 Coils Coil 420 463 - -
Mch8g2590 829 CDD STK_N 12 165 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g0531 Mch-Chr4:3353644 Mch8g2590 Mch-Chr8:29058551 9.29E-256 dispersed
Mch6g2652 Mch-Chr6:28210210 Mch8g2590 Mch-Chr8:29058551 1.71E-118 dispersed
Mch8g0371 Mch-Chr8:2645048 Mch8g2590 Mch-Chr8:29058551 6.98E-161 dispersed
Mch8g0558 Mch-Chr8:4007667 Mch8g2590 Mch-Chr8:29058551 3.23E-227 dispersed
Mch8g2590 Mch-Chr8:29058551 Mch9g0239 Mch-Chr9:1808550 2.60E-187 dispersed
Mch8g2590 Mch-Chr8:29058551 Mch11g0638 Mch-Chr11:4126323 5.92E-280 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77633 PF07714 PK_Tyr_Ser-Thr 3.80E-37 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2590 - - - 0.0