Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2593 TCCATTCATCACCAAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAGATATGGCTTTCTTTGCAACAAAAAATAGTGTCTTTTTCTCTCTCTCTACAATGCTTCTTGTTTGTCTCACTAAGTTGACTTTGCCCATTTCTCCGATTAGCTTTGGAGGGGCAATTTTGGTTGTTCCTCTCCTTACTTACATCATCTCTTCCATGGCATCCTCCTCCAAGCTCCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCGACGTTGTGCAAACGATTCGGCTCCGTCTTCCTCTTGAAGCTTGGCTCCAAGAACCTCGTTGTCGTCTCCGATGCCGAGCTTGCTAGCCAGGTTCTCCATGCTCAGGGTGTTGAGTTTGGCTCCCGACCGCGGAATGTCGTGTTTGATATTTTCACTGGGAATGGCCAGGATATGGTGTTTACGATTTATGGAGATCATTGGCGTAAGATGCGTAGAATCATGACGTTGCCGTTTTTCACGAACAAGGTGGTGCACAACTACAGTGGCATGTGGGAGGACGAGATGGACTTGGTGGTTCGGGACCTTACGAGTAATGAGAAGGTCCAATCTGAAGGGATTGTCATAAGAAAGCGCTTGCAACTTATGTTGTACAATATCATGTACCGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGATGATCCTTTGTTCATTGAAGCAACTCGATTCAACTCGGAGAGGAGTCGGTTGGCGCAGAGCTTCGAATACAACTATGGAGATTTCATTCCTTTGCTCAGACCATTCTTGAGGGGTTACTTGAACAAGTGCAAGGATTTGCAGAGCAGGAGGTTGGAGTTTTTTGACAAAAATTACGTCCAGAAAAGAAGAGCGATAATGACGGCCAATGGAGACAAGCACACGATAAATTGCGCCATGGATCACATCATAGATGCTCAACTGAAGGGTGAGATCAGCGAAGCAAACGTAATTTACATCGTGGAGAATATCAACGTTGCAGCAATAGAGACAACATTGTGGTCGATGGAGTGGGCAATAGCGGAGCTGGTAAATCACCCGAACATCCAACGCAAGATCCGGGACGAGATCACGAGCGTCCTAAAAGGAAAGCAAGTAAGTGAATCCAACCTCCATGAACTGCCATACTTGCAAGCAACAGTGAAAGAGACATTGAGGCTGCACACTCCAATACCATTGTTGGTGCCACACATGAACTTGGAAGAGGCTCAGCTGGGAGGCTACACCATTCCTAAGGAATCCAAGGTTGTGGTGAATGCATGGTGGCTGGCAAACAACCCCGCCTGGTGGAGCGATCCGGAGGAGTTCAGGCCGGAGAGGTTCTTCGAGGAAGAACGTGGCACCGAGGCGGTTGCGGCCGGGAAAGTCGATTATCGATTCTTACCGTTCGGGGTCGGGAGGAGGAGCTGCCCTGGAATTGTTTTGGCAATGCCAATCTTAGGGCTCATTGTTGCCAAGTTAGTTTCAAAGTTTGAAATGAAGCCTCCAAATGGGATGGAGAAGATTGATGTGAGTGAGAAAGGAGGC 1587 47.89 SIHHQASLSLSLSLSLLDMAFFATKNSVFFSLSTMLLVCLTKLTLPISPISFGGAILVVPLLTYIISSMASSSKLPPGPLSIPIFGNWLQVGNDLNHRLLATLCKRFGSVFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTIYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDLVVRDLTSNEKVQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLEFFDKNYVQKRRAIMTANGDKHTINCAMDHIIDAQLKGEISEANVIYIVENINVAAIETTLWSMEWAIAELVNHPNIQRKIRDEITSVLKGKQVSESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAQLGGYTIPKESKVVVNAWWLANNPAWWSDPEEFRPERFFEEERGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPNGMEKIDVSEKGG 529
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 29080565 29082240 + MC08g2051 Mch8g2593 696214
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2593 529 SUPERFAMILY Cytochrome P450 76 522 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 Gene3D Cytochrome P450 67 529 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 Pfam Cytochrome P450 76 526 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 FunFam Trans-cinnamate 4-monooxygenase 65 529 - -
Mch8g2593 529 PRINTS E-class P450 group I signature 223 241 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS E-class P450 group I signature 356 382 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS E-class P450 group I signature 104 123 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS E-class P450 group I signature 128 149 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS E-class P450 group I signature 336 353 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS E-class P450 group I signature 439 463 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS E-class P450 group I signature 490 513 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS E-class P450 group I signature 480 490 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS P450 superfamily signature 347 364 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 PRINTS P450 superfamily signature 481 490 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch8g2593 529 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 483 492 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch8g2593 529 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 57 529 - GO:0004497(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2593 Mch-Chr8:29080565 Mch1g1458 Mch-Chr1:16205164 1.01E-75 dispersed
Mch8g2593 Mch-Chr8:29080565 Mch8g2594 Mch-Chr8:29084628 3.49e-310 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2593 K00487 - csv:101204747 899.812