Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch8g2593 | TCCATTCATCACCAAGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAGATATGGCTTTCTTTGCAACAAAAAATAGTGTCTTTTTCTCTCTCTCTACAATGCTTCTTGTTTGTCTCACTAAGTTGACTTTGCCCATTTCTCCGATTAGCTTTGGAGGGGCAATTTTGGTTGTTCCTCTCCTTACTTACATCATCTCTTCCATGGCATCCTCCTCCAAGCTCCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCGACGTTGTGCAAACGATTCGGCTCCGTCTTCCTCTTGAAGCTTGGCTCCAAGAACCTCGTTGTCGTCTCCGATGCCGAGCTTGCTAGCCAGGTTCTCCATGCTCAGGGTGTTGAGTTTGGCTCCCGACCGCGGAATGTCGTGTTTGATATTTTCACTGGGAATGGCCAGGATATGGTGTTTACGATTTATGGAGATCATTGGCGTAAGATGCGTAGAATCATGACGTTGCCGTTTTTCACGAACAAGGTGGTGCACAACTACAGTGGCATGTGGGAGGACGAGATGGACTTGGTGGTTCGGGACCTTACGAGTAATGAGAAGGTCCAATCTGAAGGGATTGTCATAAGAAAGCGCTTGCAACTTATGTTGTACAATATCATGTACCGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGATGATCCTTTGTTCATTGAAGCAACTCGATTCAACTCGGAGAGGAGTCGGTTGGCGCAGAGCTTCGAATACAACTATGGAGATTTCATTCCTTTGCTCAGACCATTCTTGAGGGGTTACTTGAACAAGTGCAAGGATTTGCAGAGCAGGAGGTTGGAGTTTTTTGACAAAAATTACGTCCAGAAAAGAAGAGCGATAATGACGGCCAATGGAGACAAGCACACGATAAATTGCGCCATGGATCACATCATAGATGCTCAACTGAAGGGTGAGATCAGCGAAGCAAACGTAATTTACATCGTGGAGAATATCAACGTTGCAGCAATAGAGACAACATTGTGGTCGATGGAGTGGGCAATAGCGGAGCTGGTAAATCACCCGAACATCCAACGCAAGATCCGGGACGAGATCACGAGCGTCCTAAAAGGAAAGCAAGTAAGTGAATCCAACCTCCATGAACTGCCATACTTGCAAGCAACAGTGAAAGAGACATTGAGGCTGCACACTCCAATACCATTGTTGGTGCCACACATGAACTTGGAAGAGGCTCAGCTGGGAGGCTACACCATTCCTAAGGAATCCAAGGTTGTGGTGAATGCATGGTGGCTGGCAAACAACCCCGCCTGGTGGAGCGATCCGGAGGAGTTCAGGCCGGAGAGGTTCTTCGAGGAAGAACGTGGCACCGAGGCGGTTGCGGCCGGGAAAGTCGATTATCGATTCTTACCGTTCGGGGTCGGGAGGAGGAGCTGCCCTGGAATTGTTTTGGCAATGCCAATCTTAGGGCTCATTGTTGCCAAGTTAGTTTCAAAGTTTGAAATGAAGCCTCCAAATGGGATGGAGAAGATTGATGTGAGTGAGAAAGGAGGC | 1587 | 47.89 | SIHHQASLSLSLSLSLLDMAFFATKNSVFFSLSTMLLVCLTKLTLPISPISFGGAILVVPLLTYIISSMASSSKLPPGPLSIPIFGNWLQVGNDLNHRLLATLCKRFGSVFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTIYGDHWRKMRRIMTLPFFTNKVVHNYSGMWEDEMDLVVRDLTSNEKVQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLEFFDKNYVQKRRAIMTANGDKHTINCAMDHIIDAQLKGEISEANVIYIVENINVAAIETTLWSMEWAIAELVNHPNIQRKIRDEITSVLKGKQVSESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAQLGGYTIPKESKVVVNAWWLANNPAWWSDPEEFRPERFFEEERGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPNGMEKIDVSEKGG | 529 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 29080565 | 29082240 | + | MC08g2051 | Mch8g2593 | 696214 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch8g2593 | 529 | SUPERFAMILY | Cytochrome P450 | 76 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | Gene3D | Cytochrome P450 | 67 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | Pfam | Cytochrome P450 | 76 | 526 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | FunFam | Trans-cinnamate 4-monooxygenase | 65 | 529 | - | - | |
| Mch8g2593 | 529 | PRINTS | E-class P450 group I signature | 223 | 241 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | E-class P450 group I signature | 356 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | E-class P450 group I signature | 398 | 416 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | E-class P450 group I signature | 104 | 123 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | E-class P450 group I signature | 128 | 149 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | E-class P450 group I signature | 336 | 353 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | E-class P450 group I signature | 439 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | E-class P450 group I signature | 490 | 513 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | E-class P450 group I signature | 480 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | P450 superfamily signature | 399 | 410 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | P450 superfamily signature | 347 | 364 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | PRINTS | P450 superfamily signature | 481 | 490 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch8g2593 | 529 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 483 | 492 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch8g2593 | 529 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 57 | 529 | - | GO:0004497(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch8g2593 | Mch-Chr8:29080565 | Mch1g1458 | Mch-Chr1:16205164 | 1.01E-75 | dispersed | |
| Mch8g2593 | Mch-Chr8:29080565 | Mch8g2594 | Mch-Chr8:29084628 | 3.49e-310 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch8g2593 | K00487 | - | csv:101204747 | 899.812 |