Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch8g2603 | ATGAGTCTATTCAAGGGCTCTCCGTACGGAAGACGGAGTGATGTGGAGTCCGGTAGCAGCAATTCCGGCGAGCCGGAGGAGGAGGACTCCTCTAATCCTTTCGATATTTCCAGGACTAAGAATGCCTCTGTCGACAGACTTCGCCGCTGGAGACAAGCTGCGCTAGTGTTAAATGCTTCTCGTCGATTTCGGTATACCTTAGACTTGAAAAAGGAAGAAGAGAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATATCTCTTCAAAGAGGCTGGGGATCGTCTAATTGTTCCAGGACCTACAACAGCAGGACCTCTGAATGGTGATTTTTCTGTTGCGCCAGAACAACTGGCTGTGTTGGTAAAAGATCGTAATGTTGAAGCTCTGGAACAATATGGAGGGGTTAAAGGGGTAGCAGATATGTTACAATCGAATGTAGAGAAGGGGATAAGTGGTGATGATTCTGATTTACTGAATCGGAGAAATGCATATGGTTCAAACACATATCCTCAGAAACCAGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACATTGATTATATTGATGATAGCTGCTGTTGCTTCTTTGGTACTAGGCATAAAGACTGAGGGTATCAAGGAAGGCTGGTACGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTTGTAACAGCTATTAGTGACTACCGACAATCTCTTCAATTTCAGAACTTGAATAAGGAGAAGAGGAACATACAAGTGGAGGTAGTTAGAGGTGGTCGACGAATTGAGGTCTCAATTTATGACATTGTTGTTGGTGATGTTATACCCCTCAATATTGGTGATCAGGTCCCTGCTGATGGCATCTTAATTTCTGGACACTCACTTGCTATTGATGAATCGAGCATGACTGGAGAGAGCAAGATTGTTCAAAAGCATGCTAAGGAACCTTTCCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGCACCATGCTGGTTACGAGTGTTGGAGTTAATACTGAATGGGGGTTGCTTATGGCAAGTATCTCTGAAGACAATGGCGAGGAAACTCCTTTGCAGGTTCGTTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTCACAGTAGCGCTTGCTGTCTTGGTTGTGCTTGTCGCAAGGTATTTCACTGGTCACACCAAAAATCCAGATGGAAGTCCTCAGTTTGTTGCAGGTCAGACAAAAGTTGGTCGTGCTGTGGATGGGGCCATCAAAATTATTACCATCGCAGTTACCATTGTTGTGGTTGCTGTGCCTGAAGGGCTTCCACTAGCTGTAACCTTAACTCTTGCATACTCAATGAGAAAGATGATGGCAGACAAAGCATTGGTGCGGAGGCTATCTGCATGCGAGACGATGGGGTCTGCTACAACTATTTGTAGTGACAAGACTGGAACCTTAACTTTAAATAAAATGACCATTGTTGAGGCATATGTTGGTGGGAAGAAGATTGATCCGCCAGAGAATAAGTCAGAGTTGTCTCCCATATTATACTCCTTACTTGTCGAAGGCATTACTCTGAACTCAAATGGCAGTGTATATGTGCCTGAGAGTGGCGGAGAGGAAGAAGTTACTGGATCACCTACAGAAAAGGCTATTCTTAATTGGGGTATCAAGCTGGGAATGAACTTTGAAGCAATTAGATCAGAATCTGCAATTCTCCATGTTTTCCCCTTCAGCTCGGAGAAAAAACGTGGTGGTGTCGCAGGTCAACGGCCTGATGATCAAGTCCATATACATTGGAAAGGTGCTGCTGAAATAGTATTAGCATCATGCACACAGTACATGGATGAACATGATCACTCTGTCAAATTGGATGAAGATAAGACTAAGTTTTTCAAGAGAGCCATTGAGGATATGGCGTCTCGTAGTTTACGTTGTGTTGCAATTGCATATAGATCTTTTGAACCTGATAAAGTTCCTGATGGTGAAGAACAGTTGAGTAAGTGGGCTCTACCAGAAGACGACCTTGTTTTGTTGGCTATTGTTGGTATAAAGGATCCCTGTCGACCAGGAGTAAAAGATGCAGTGCGACTTTGCCAAAATGCTGGTGTTAAGGTACGCATGGTCACTGGTGATAATGTTCAAACTGCTAGAGCTATTGCCTTGGAATGTGGAATACTTGCTTCAGATTCAGATGCTACTGAACCAAATCTGATTGAAGGAAGAGCGTTCCGAGTCTTAACTGATGCACAAAGAGAAGAAGTTGCTGAGAAAATATCGGTGATGGGCCGGTCGTCTCCCAATGATAAGCTTCTCCTTGTGCAAGCATTGAGAAAGAGAGGACATGTAGTTGCTGTAACTGGAGATGGTACAAATGATGCTCCTGCATTACATGAGGCAGATATTGGACTTGCAATGGGTATTCAGGGGACAGAAGTTGCAAAAGAAAGCTCAGATATTATTATTTTGGATGACAACTTTGCTTCCGTTGTCAAGGTTGTAAGGTGGGGCAGATCAGTTTATGCAAATATTCAGAAATTCATCCAGTTTCAGCTCACTGTTAATGTTGCAGCACTCGTTATCAATGTTGTGGCAGCAATATCCTCTGGTGATGTCCCACTAAATGCAGTGCAGCTTTTGTGGGTTAATCTTATTATGGACACTCTCGGGGCATTAGCGTTGGCTACTGAACCACCAACCAATCATCTCATGCAGAGGTCACCAGTTGGTAGAAGAGAACCTCTTATCACAAATATCATGTGGAGAAACTTGCTGATACAGGCATTTTATCAAGTTGCTGTGTTGCTTGTCCTCAATTTTCGTGGTCGAAGTTTGCTACATTTGAACCACTCTGCTGCAGAAGCTAATAAAGTGAAGAATACACTGATCTTCAATGCATTTGTGCTTTGCCAAATTTTCAATGAATTTAATGCTCGAAAACCCGATGAGAAGAATATATTCAAAGGAGTCACGAAAAACTTTCTCTTTATTGGAATAGTTGGAATTACTCTTGTGCTTCAGGTGGTAATAATCGAGTTTCTTGGAAAATTCACTTCTACGGTCAGGCTTAATTGGAAATATTGGATCATTTCTGTAATCATTGGTTTCATCAGTTGGCCTCTAGCTCTCGTTGGGAAATTCATACCTGTTCCTGAAACTCCCTTGCATGAGTTGATTATCAGAATTTTCTGTAAACGACGTCGTTCCCAACACGGGGGAGCTTAA | 3234 | 42.83 | MSLFKGSPYGRRSDVESGSSNSGEPEEEDSSNPFDISRTKNASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALRKIRAHAQAIRAAYLFKEAGDRLIVPGPTTAGPLNGDFSVAPEQLAVLVKDRNVEALEQYGGVKGVADMLQSNVEKGISGDDSDLLNRRNAYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNKEKRNIQVEVVRGGRRIEVSIYDIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKHAKEPFLMSGCKVADGSGTMLVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLTVALAVLVVLVARYFTGHTKNPDGSPQFVAGQTKVGRAVDGAIKIITIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNKMTIVEAYVGGKKIDPPENKSELSPILYSLLVEGITLNSNGSVYVPESGGEEEVTGSPTEKAILNWGIKLGMNFEAIRSESAILHVFPFSSEKKRGGVAGQRPDDQVHIHWKGAAEIVLASCTQYMDEHDHSVKLDEDKTKFFKRAIEDMASRSLRCVAIAYRSFEPDKVPDGEEQLSKWALPEDDLVLLAIVGIKDPCRPGVKDAVRLCQNAGVKVRMVTGDNVQTARAIALECGILASDSDATEPNLIEGRAFRVLTDAQREEVAEKISVMGRSSPNDKLLLVQALRKRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMQRSPVGRREPLITNIMWRNLLIQAFYQVAVLLVLNFRGRSLLHLNHSAAEANKVKNTLIFNAFVLCQIFNEFNARKPDEKNIFKGVTKNFLFIGIVGITLVLQVVIIEFLGKFTSTVRLNWKYWIISVIIGFISWPLALVGKFIPVPETPLHELIIRIFCKRRRSQHGGA | 1077 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 29182114 | 29214668 | - | MC08g2059 | Mch8g2603 | 696224 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch8g2603 | 1077 | Gene3D | - | 492 | 690 | IPR023299 | GO:0000166(InterPro) | |
| Mch8g2603 | 1077 | FunFam | Calcium-transporting ATPase | 190 | 247 | - | - | |
| Mch8g2603 | 1077 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 484 | 490 | IPR018303 | - | |
| Mch8g2603 | 1077 | Gene3D | - | 42 | 98 | - | - | |
| Mch8g2603 | 1077 | Gene3D | - | 190 | 1042 | - | - | |
| Mch8g2603 | 1077 | PRINTS | Sodium/potassium-transporting ATPase signature | 601 | 619 | - | - | |
| Mch8g2603 | 1077 | PRINTS | Sodium/potassium-transporting ATPase signature | 475 | 496 | - | - | |
| Mch8g2603 | 1077 | PRINTS | Sodium/potassium-transporting ATPase signature | 225 | 245 | - | - | |
| Mch8g2603 | 1077 | Gene3D | - | 479 | 835 | IPR023214 | - | |
| Mch8g2603 | 1077 | FunFam | Calcium-transporting ATPase | 237 | 358 | - | - | |
| Mch8g2603 | 1077 | SUPERFAMILY | Calcium ATPase, transduction domain A | 259 | 355 | IPR008250 | - | |
| Mch8g2603 | 1077 | CDD | P-type_ATPase_Ca_PMCA-like | 164 | 923 | - | - | |
| Mch8g2603 | 1077 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 132 | 1053 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Mch8g2603 | 1077 | PANTHER | CATION TRANSPORTING ATPASE | 90 | 1053 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Mch8g2603 | 1077 | PRINTS | P-type cation-transporting ATPase superfamily signature | 790 | 809 | - | - | |
| Mch8g2603 | 1077 | PRINTS | P-type cation-transporting ATPase superfamily signature | 705 | 715 | - | - | |
| Mch8g2603 | 1077 | PRINTS | P-type cation-transporting ATPase superfamily signature | 814 | 826 | - | - | |
| Mch8g2603 | 1077 | PRINTS | P-type cation-transporting ATPase superfamily signature | 482 | 496 | - | - | |
| Mch8g2603 | 1077 | PRINTS | P-type cation-transporting ATPase superfamily signature | 683 | 694 | - | - | |
| Mch8g2603 | 1077 | PRINTS | P-type cation-transporting ATPase superfamily signature | 306 | 320 | - | - | |
| Mch8g2603 | 1077 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 31 | 74 | IPR024750 | GO:0005516(InterPro) | |
| Mch8g2603 | 1077 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 139 | 1053 | IPR023298 | - | |
| Mch8g2603 | 1077 | FunFam | Calcium-transporting ATPase | 683 | 835 | - | - | |
| Mch8g2603 | 1077 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 489 | 687 | IPR023299 | GO:0000166(InterPro) | |
| Mch8g2603 | 1077 | SFLD | Haloacid Dehalogenase | 464 | 842 | - | - | |
| Mch8g2603 | 1077 | Pfam | haloacid dehalogenase-like hydrolase | 480 | 804 | - | - | |
| Mch8g2603 | 1077 | Gene3D | - | 164 | 358 | - | - | |
| Mch8g2603 | 1077 | FunFam | Calcium-transporting ATPase | 492 | 690 | - | - | |
| Mch8g2603 | 1077 | Pfam | E1-E2 ATPase | 259 | 460 | - | - | |
| Mch8g2603 | 1077 | FunFam | Calcium-transporting ATPase | 42 | 98 | - | - | |
| Mch8g2603 | 1077 | FunFam | Calcium-transporting ATPase | 807 | 1055 | - | - | |
| Mch8g2603 | 1077 | NCBIfam | HAD-IC family P-type ATPase | 422 | 505 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Mch8g2603 | 1077 | NCBIfam | HAD-IC family P-type ATPase | 227 | 399 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Mch8g2603 | 1077 | NCBIfam | HAD-IC family P-type ATPase | 757 | 870 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Mch8g2603 | 1077 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Mch8g2603 | 1077 | MobiDBLite | consensus disorder prediction | 13 | 27 | - | - | |
| Mch8g2603 | 1077 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 336 | 506 | - | - | |
| Mch8g2603 | 1077 | SMART | Cation_ATPase_N_a_2 | 138 | 212 | IPR004014 | - | |
| Mch8g2603 | 1077 | Coils | Coil | 69 | 89 | - | - | |
| Mch8g2603 | 1077 | Pfam | Cation transporter/ATPase, N-terminus | 139 | 207 | IPR004014 | - | |
| Mch8g2603 | 1077 | Pfam | Cation transporting ATPase, C-terminus | 875 | 1051 | IPR006068 | - | |
| Mch8g2603 | 1077 | SFLD | p-type atpase | 464 | 842 | IPR044492 | - | |
| Mch8g2603 | 1077 | SUPERFAMILY | HAD-like | 480 | 895 | IPR036412 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch11g0362 | Mch-Chr11:2235763 | Mch8g2603 | Mch-Chr8:29182114 | 1.55e-310 | dispersed | |
| Mch4g1640 | Mch-Chr4:19612194 | Mch8g2603 | Mch-Chr8:29182114 | 8.91E-306 | dispersed | |
| Mch8g0622 | Mch-Chr8:4460229 | Mch8g2603 | Mch-Chr8:29182114 | 8.34E-88 | dispersed | |
| Mch8g2603 | Mch-Chr8:29182114 | Mch9g0154 | Mch-Chr9:1193848 | 0 | dispersed | |
| Mch8g2603 | Mch-Chr8:29182114 | Mch9g0907 | Mch-Chr9:7172631 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch8g2603 | K01537 | - | csv:101211703 | 1860.11 |