Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2603 ATGAGTCTATTCAAGGGCTCTCCGTACGGAAGACGGAGTGATGTGGAGTCCGGTAGCAGCAATTCCGGCGAGCCGGAGGAGGAGGACTCCTCTAATCCTTTCGATATTTCCAGGACTAAGAATGCCTCTGTCGACAGACTTCGCCGCTGGAGACAAGCTGCGCTAGTGTTAAATGCTTCTCGTCGATTTCGGTATACCTTAGACTTGAAAAAGGAAGAAGAGAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATATCTCTTCAAAGAGGCTGGGGATCGTCTAATTGTTCCAGGACCTACAACAGCAGGACCTCTGAATGGTGATTTTTCTGTTGCGCCAGAACAACTGGCTGTGTTGGTAAAAGATCGTAATGTTGAAGCTCTGGAACAATATGGAGGGGTTAAAGGGGTAGCAGATATGTTACAATCGAATGTAGAGAAGGGGATAAGTGGTGATGATTCTGATTTACTGAATCGGAGAAATGCATATGGTTCAAACACATATCCTCAGAAACCAGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACATTGATTATATTGATGATAGCTGCTGTTGCTTCTTTGGTACTAGGCATAAAGACTGAGGGTATCAAGGAAGGCTGGTACGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTTGTAACAGCTATTAGTGACTACCGACAATCTCTTCAATTTCAGAACTTGAATAAGGAGAAGAGGAACATACAAGTGGAGGTAGTTAGAGGTGGTCGACGAATTGAGGTCTCAATTTATGACATTGTTGTTGGTGATGTTATACCCCTCAATATTGGTGATCAGGTCCCTGCTGATGGCATCTTAATTTCTGGACACTCACTTGCTATTGATGAATCGAGCATGACTGGAGAGAGCAAGATTGTTCAAAAGCATGCTAAGGAACCTTTCCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGCACCATGCTGGTTACGAGTGTTGGAGTTAATACTGAATGGGGGTTGCTTATGGCAAGTATCTCTGAAGACAATGGCGAGGAAACTCCTTTGCAGGTTCGTTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTCACAGTAGCGCTTGCTGTCTTGGTTGTGCTTGTCGCAAGGTATTTCACTGGTCACACCAAAAATCCAGATGGAAGTCCTCAGTTTGTTGCAGGTCAGACAAAAGTTGGTCGTGCTGTGGATGGGGCCATCAAAATTATTACCATCGCAGTTACCATTGTTGTGGTTGCTGTGCCTGAAGGGCTTCCACTAGCTGTAACCTTAACTCTTGCATACTCAATGAGAAAGATGATGGCAGACAAAGCATTGGTGCGGAGGCTATCTGCATGCGAGACGATGGGGTCTGCTACAACTATTTGTAGTGACAAGACTGGAACCTTAACTTTAAATAAAATGACCATTGTTGAGGCATATGTTGGTGGGAAGAAGATTGATCCGCCAGAGAATAAGTCAGAGTTGTCTCCCATATTATACTCCTTACTTGTCGAAGGCATTACTCTGAACTCAAATGGCAGTGTATATGTGCCTGAGAGTGGCGGAGAGGAAGAAGTTACTGGATCACCTACAGAAAAGGCTATTCTTAATTGGGGTATCAAGCTGGGAATGAACTTTGAAGCAATTAGATCAGAATCTGCAATTCTCCATGTTTTCCCCTTCAGCTCGGAGAAAAAACGTGGTGGTGTCGCAGGTCAACGGCCTGATGATCAAGTCCATATACATTGGAAAGGTGCTGCTGAAATAGTATTAGCATCATGCACACAGTACATGGATGAACATGATCACTCTGTCAAATTGGATGAAGATAAGACTAAGTTTTTCAAGAGAGCCATTGAGGATATGGCGTCTCGTAGTTTACGTTGTGTTGCAATTGCATATAGATCTTTTGAACCTGATAAAGTTCCTGATGGTGAAGAACAGTTGAGTAAGTGGGCTCTACCAGAAGACGACCTTGTTTTGTTGGCTATTGTTGGTATAAAGGATCCCTGTCGACCAGGAGTAAAAGATGCAGTGCGACTTTGCCAAAATGCTGGTGTTAAGGTACGCATGGTCACTGGTGATAATGTTCAAACTGCTAGAGCTATTGCCTTGGAATGTGGAATACTTGCTTCAGATTCAGATGCTACTGAACCAAATCTGATTGAAGGAAGAGCGTTCCGAGTCTTAACTGATGCACAAAGAGAAGAAGTTGCTGAGAAAATATCGGTGATGGGCCGGTCGTCTCCCAATGATAAGCTTCTCCTTGTGCAAGCATTGAGAAAGAGAGGACATGTAGTTGCTGTAACTGGAGATGGTACAAATGATGCTCCTGCATTACATGAGGCAGATATTGGACTTGCAATGGGTATTCAGGGGACAGAAGTTGCAAAAGAAAGCTCAGATATTATTATTTTGGATGACAACTTTGCTTCCGTTGTCAAGGTTGTAAGGTGGGGCAGATCAGTTTATGCAAATATTCAGAAATTCATCCAGTTTCAGCTCACTGTTAATGTTGCAGCACTCGTTATCAATGTTGTGGCAGCAATATCCTCTGGTGATGTCCCACTAAATGCAGTGCAGCTTTTGTGGGTTAATCTTATTATGGACACTCTCGGGGCATTAGCGTTGGCTACTGAACCACCAACCAATCATCTCATGCAGAGGTCACCAGTTGGTAGAAGAGAACCTCTTATCACAAATATCATGTGGAGAAACTTGCTGATACAGGCATTTTATCAAGTTGCTGTGTTGCTTGTCCTCAATTTTCGTGGTCGAAGTTTGCTACATTTGAACCACTCTGCTGCAGAAGCTAATAAAGTGAAGAATACACTGATCTTCAATGCATTTGTGCTTTGCCAAATTTTCAATGAATTTAATGCTCGAAAACCCGATGAGAAGAATATATTCAAAGGAGTCACGAAAAACTTTCTCTTTATTGGAATAGTTGGAATTACTCTTGTGCTTCAGGTGGTAATAATCGAGTTTCTTGGAAAATTCACTTCTACGGTCAGGCTTAATTGGAAATATTGGATCATTTCTGTAATCATTGGTTTCATCAGTTGGCCTCTAGCTCTCGTTGGGAAATTCATACCTGTTCCTGAAACTCCCTTGCATGAGTTGATTATCAGAATTTTCTGTAAACGACGTCGTTCCCAACACGGGGGAGCTTAA 3234 42.83 MSLFKGSPYGRRSDVESGSSNSGEPEEEDSSNPFDISRTKNASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALRKIRAHAQAIRAAYLFKEAGDRLIVPGPTTAGPLNGDFSVAPEQLAVLVKDRNVEALEQYGGVKGVADMLQSNVEKGISGDDSDLLNRRNAYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNKEKRNIQVEVVRGGRRIEVSIYDIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKHAKEPFLMSGCKVADGSGTMLVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLTVALAVLVVLVARYFTGHTKNPDGSPQFVAGQTKVGRAVDGAIKIITIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNKMTIVEAYVGGKKIDPPENKSELSPILYSLLVEGITLNSNGSVYVPESGGEEEVTGSPTEKAILNWGIKLGMNFEAIRSESAILHVFPFSSEKKRGGVAGQRPDDQVHIHWKGAAEIVLASCTQYMDEHDHSVKLDEDKTKFFKRAIEDMASRSLRCVAIAYRSFEPDKVPDGEEQLSKWALPEDDLVLLAIVGIKDPCRPGVKDAVRLCQNAGVKVRMVTGDNVQTARAIALECGILASDSDATEPNLIEGRAFRVLTDAQREEVAEKISVMGRSSPNDKLLLVQALRKRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMQRSPVGRREPLITNIMWRNLLIQAFYQVAVLLVLNFRGRSLLHLNHSAAEANKVKNTLIFNAFVLCQIFNEFNARKPDEKNIFKGVTKNFLFIGIVGITLVLQVVIIEFLGKFTSTVRLNWKYWIISVIIGFISWPLALVGKFIPVPETPLHELIIRIFCKRRRSQHGGA 1077
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 29182114 29214668 - MC08g2059 Mch8g2603 696224
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2603 1077 Gene3D - 492 690 IPR023299 GO:0000166(InterPro)
Mch8g2603 1077 FunFam Calcium-transporting ATPase 190 247 - -
Mch8g2603 1077 ProSitePatterns E1-E2 ATPases phosphorylation site. 484 490 IPR018303 -
Mch8g2603 1077 Gene3D - 42 98 - -
Mch8g2603 1077 Gene3D - 190 1042 - -
Mch8g2603 1077 PRINTS Sodium/potassium-transporting ATPase signature 601 619 - -
Mch8g2603 1077 PRINTS Sodium/potassium-transporting ATPase signature 475 496 - -
Mch8g2603 1077 PRINTS Sodium/potassium-transporting ATPase signature 225 245 - -
Mch8g2603 1077 Gene3D - 479 835 IPR023214 -
Mch8g2603 1077 FunFam Calcium-transporting ATPase 237 358 - -
Mch8g2603 1077 SUPERFAMILY Calcium ATPase, transduction domain A 259 355 IPR008250 -
Mch8g2603 1077 CDD P-type_ATPase_Ca_PMCA-like 164 923 - -
Mch8g2603 1077 NCBIfam calcium-translocating P-type ATPase, PMCA-type 132 1053 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Mch8g2603 1077 PANTHER CATION TRANSPORTING ATPASE 90 1053 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Mch8g2603 1077 PRINTS P-type cation-transporting ATPase superfamily signature 790 809 - -
Mch8g2603 1077 PRINTS P-type cation-transporting ATPase superfamily signature 705 715 - -
Mch8g2603 1077 PRINTS P-type cation-transporting ATPase superfamily signature 814 826 - -
Mch8g2603 1077 PRINTS P-type cation-transporting ATPase superfamily signature 482 496 - -
Mch8g2603 1077 PRINTS P-type cation-transporting ATPase superfamily signature 683 694 - -
Mch8g2603 1077 PRINTS P-type cation-transporting ATPase superfamily signature 306 320 - -
Mch8g2603 1077 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 74 IPR024750 GO:0005516(InterPro)
Mch8g2603 1077 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 1053 IPR023298 -
Mch8g2603 1077 FunFam Calcium-transporting ATPase 683 835 - -
Mch8g2603 1077 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 489 687 IPR023299 GO:0000166(InterPro)
Mch8g2603 1077 SFLD Haloacid Dehalogenase 464 842 - -
Mch8g2603 1077 Pfam haloacid dehalogenase-like hydrolase 480 804 - -
Mch8g2603 1077 Gene3D - 164 358 - -
Mch8g2603 1077 FunFam Calcium-transporting ATPase 492 690 - -
Mch8g2603 1077 Pfam E1-E2 ATPase 259 460 - -
Mch8g2603 1077 FunFam Calcium-transporting ATPase 42 98 - -
Mch8g2603 1077 FunFam Calcium-transporting ATPase 807 1055 - -
Mch8g2603 1077 NCBIfam HAD-IC family P-type ATPase 422 505 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch8g2603 1077 NCBIfam HAD-IC family P-type ATPase 227 399 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch8g2603 1077 NCBIfam HAD-IC family P-type ATPase 757 870 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch8g2603 1077 MobiDBLite consensus disorder prediction 1 37 - -
Mch8g2603 1077 MobiDBLite consensus disorder prediction 13 27 - -
Mch8g2603 1077 FunFam Calcium-transporting ATPase 9 plasma membrane-type 336 506 - -
Mch8g2603 1077 SMART Cation_ATPase_N_a_2 138 212 IPR004014 -
Mch8g2603 1077 Coils Coil 69 89 - -
Mch8g2603 1077 Pfam Cation transporter/ATPase, N-terminus 139 207 IPR004014 -
Mch8g2603 1077 Pfam Cation transporting ATPase, C-terminus 875 1051 IPR006068 -
Mch8g2603 1077 SFLD p-type atpase 464 842 IPR044492 -
Mch8g2603 1077 SUPERFAMILY HAD-like 480 895 IPR036412 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0362 Mch-Chr11:2235763 Mch8g2603 Mch-Chr8:29182114 1.55e-310 dispersed
Mch4g1640 Mch-Chr4:19612194 Mch8g2603 Mch-Chr8:29182114 8.91E-306 dispersed
Mch8g0622 Mch-Chr8:4460229 Mch8g2603 Mch-Chr8:29182114 8.34E-88 dispersed
Mch8g2603 Mch-Chr8:29182114 Mch9g0154 Mch-Chr9:1193848 0 dispersed
Mch8g2603 Mch-Chr8:29182114 Mch9g0907 Mch-Chr9:7172631 0 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2603 K01537 - csv:101211703 1860.11