Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2640 ATGGGAAACGACACCGCTTTAACTCTCGAGGAGATCAAGAACGAGACCGTTGATCTGGAGAAAATTCCTATTGAAGAAGTGTTTGAGCAGCTGAAATGTACAAGGGAAGGTTTAAGTTCTCAAGAGGGGGAGAACCGTCTTCAAATCTTTGGCCCCAACAAGCTAGAAGAGAAAAAGGAAAGCAAGATTCTGAAGTTTCTTGGGTTTATGTGGAATCCCCTCTCATGGGTCATGGAAGCTGCAGCTATCATGGCCATTGCCCTGGCCAACGGCGGCGGTAAGGGCCCGGATTGGCAGGATTTTGTCGGTATCGTCTGTCTGCTGGTTATCAACTCCACCATCAGTTTCATTGAAGAGAACAATGCTGGTAATGCAGCAGCTGCTCTTATGGCTGGTCTTGCTCCTAAAACTAAGGTTCTGAGGGATGGAAAATGGTGTGAACAAGATGCAGCAATTCTGGTTCCTGGAGATGTGATCAGTGTGAAATTGGGAGACATCATCCCGGCCGATGCTCGTCTTCTCGAGGGTGATCCGTTAAAGGTCGATCAATCTGCCTTGACTGGAGAATCACTTCCTGTGACCAAGCATCCTGGGGATGAAGTCTTCTCAGGCTCAACTTGCAAACAAGGAGAAATTGAAGCTGTTGTTATTGCCACTGGTGTCCACACCTTCTTTGGAAAGGCAGCTCATCTTGTTGACAGCACCAACCAAGTTGGTCACTTCCAGAAGGTTCTCACTGCCATTGGGAACTTCTGTATTTGCTCCATTGCCATTGGTATGCTGATTGAGATCATCGTCATGTACCCGATCCAACACCGTGCCTACAGAGACGGAATCGACAATCTTTTGGTTCTCTTGATTGGAGGCATTCCAATTGCTATGCCCACTGTCTTGTCTGTGACAATGGCCATTGGTTCTCACAAGCTGTCCCAACAGGGTGCTATCACCAAGAGAATGACTGCCATCGAAGAAATGGCCGGTATGGACGTTCTCTGCAGCGACAAGACTGGAACACTGACTCTCAACAAGCTGAGTGTTGACAAGAACTTGATTGAAGTATTTATCAAGGGCGTAGACAAAGAGCATGTCATTCTTCTTGCTGCACGGGCCTCTAGGACAGAAAACCAAGATGCCATTGATGCTGCCATGGTTGGAATGCTCGCAGACCCGAAAGAGGCAAGAGCTGGAATTAGAGAAGTTCACTTCTTGCCATTCAACCCTGTGGATAAGAGAACTGCCTTGACTTACATTGATTCAAACGGTAACTGGCACCGTGCTAGCAAAGGTGCTCCCGAGCAGATCTTGGATCTTTGCAACTGCAGAGAGGACTTTAAGAGGAAGGTGTTTTCTGTGATTGACAAGTTTGCGGAGCGTGGGCTTCGATCGTTGGCTGTTGCTAGACAGGAAGTGCCTGAAAAGACTAAGGAGAGTTCTGGTGCTCCCTGGCAATTCGTTGGTTTGTTGCCCCTTTTTGATCCTCCTAGACACGACAGTGCCGAAACCATTCGCAGGGCTCTCAATTTGGGAGTGAATGTCAAGATGATTACCGGTGATCAACTTGCCATCGGAAAGGAAACTGGTCGAAGACTTGGAATGGGAACAAATATGTATCCGTCTTCTTCTTTACTCGGCCAGCACAAGGATGAAAGCATAGCTGGCCTTCCTGTTGAAGAGTTGATTGAGAAGGCTGATGGATTCGCCGGAGTGTTTCCAGGTGAACTTTGTCTCCTGTTAATCCTTAATACAAATCACAAGATGTTTACACCCCATTTTTCGGTTTCAATTCTCTTTTCTCTTATGATGCAATGTTTAGAACACAAATACGAAATCGTAAAGAAGTTGCAAGAGAGGAAGCACATTTGTGGAATGACAGGAGATGGTGTGAACGATGCCCCTGCTTTAAAGAAGGCCGACATTGGTATTGCTGTTGCTGATGCTACAGATGCTGCACGAGGCGCATCGGACATTGTTCTTACAGAGCCTGGATTGAGTGTTATCATTAGTGCCGTCTTGACTAGCAGAGCAATTTTCCAAAGAATGAAGAACTATACCATTTATGCAGTCTCCATCACAATTCGTATTGTGTTTGGTTTCATGTTCATTGCCCTCATTTGGAAGTTCGATTTCTCACCCTTCATGGTTTTGATTATCGCCATCCTGAATGACGGTACAATTATGACAATTTCAAAGGACAGGGTGAAGCCATCTCCATTACCTGACAGTTGGAAACTAAAGGAGATTTTTGCGACCGGGGTAGTACTCGGAGGGTACTTGGCATTGATGACGGTTATATTCTTTTGGTTAATGGATGGAACAAACTTCTTCTCCGACAAATTTGGTGTAAGATCCATCCGTCATAGTGAATATGAAATGATGGCTGCTTTATACCTCCAAGTGAGTATTGTCAGCCAGGCTTTGATTTTTGTAACTCGATCGCGTAGCTGGTCGTATGTTGAGCGCCCTGGACTTTTGTTGGTGGGCGCTTTCTTGATTGCACAATTGGTTGCAACTTTGATCGCGGTGTATGCTAACTGGGGTTTCGCAAAGATCAAGGGAATCGGATGGGGATGGGCCGGTGTCATCTGGCTTTACAGCATTGTGTTCTATATCCCACTCGATATCATGAAGTTCGCCATTCGGTACATCTTGAGCGGAAAGGCATGGCTCAACTTGTTGGAGAACAAGACTGCTTTCACCACCAAGAAAGACTATGGAAAAGAGGAGAGGGAAGCTCAATGGGCTCTTGCTCAAAGGACATTACATGGACTTCAACCTCCCGAATCGACGAACATCTTCTCCGAAAAGAGCAGCTACAGAGAACTCTCTGAGATCGCAGAGCAAGCTAAGAGACGTGCCGAGATTGCAAGGCTCCGAGAGCTCAACACACTCAAGGGTCACGTCGAGTCCGTCGTGAAGTTGAAGGGACTCGACATCGACACAATCCAGCAGCACTACACAGTGTGA 2964 46.56 MGNDTALTLEEIKNETVDLEKIPIEEVFEQLKCTREGLSSQEGENRLQIFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKGPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEQDAAILVPGDVISVKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMLIEIIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFIKGVDKEHVILLAARASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSNGNWHRASKGAPEQILDLCNCREDFKRKVFSVIDKFAERGLRSLAVARQEVPEKTKESSGAPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQHKDESIAGLPVEELIEKADGFAGVFPGELCLLLILNTNHKMFTPHFSVSILFSLMMQCLEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGGYLALMTVIFFWLMDGTNFFSDKFGVRSIRHSEYEMMAALYLQVSIVSQALIFVTRSRSWSYVERPGLLLVGAFLIAQLVATLIAVYANWGFAKIKGIGWGWAGVIWLYSIVFYIPLDIMKFAIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPESTNIFSEKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 987
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 29630087 29636644 - MC08g2087 Mch8g2640 696261
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2640 987 SUPERFAMILY HAD-like 328 671 IPR036412 -
Mch8g2640 987 Gene3D - 346 491 IPR023299 GO:0000166(InterPro)
Mch8g2640 987 NCBIfam plasma-membrane proton-efflux P-type ATPase 37 571 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Mch8g2640 987 SMART Cation_ATPase_N_a_2 18 90 IPR004014 -
Mch8g2640 987 FunFam ATPase 4 plasma membrane-type 601 851 - -
Mch8g2640 987 Gene3D - 217 345 - -
Mch8g2640 987 CDD P-type_ATPase_H 37 877 IPR006534 GO:0008553(InterPro)|GO:0016020(InterPro)|GO:0120029(InterPro)
Mch8g2640 987 Gene3D - 140 216 - -
Mch8g2640 987 PANTHER CALCIUM-TRANSPORTING ATPASE 20 911 - GO:0005886(PANTHER)|GO:0008553(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0051453(PANTHER)|GO:1902600(PANTHER)
Mch8g2640 987 NCBIfam HAD-IC family P-type ATPase 605 713 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch8g2640 987 NCBIfam HAD-IC family P-type ATPase 104 351 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch8g2640 987 ProSitePatterns E1-E2 ATPases phosphorylation site. 334 340 IPR018303 -
Mch8g2640 987 FunFam ATPase 2, plasma membrane-type 485 586 - -
Mch8g2640 987 SUPERFAMILY Calcium ATPase, transduction domain A 135 232 IPR008250 -
Mch8g2640 987 FunFam Plasma membrane ATPase 344 491 - -
Mch8g2640 987 FunFam Plasma membrane ATPase 597 672 - -
Mch8g2640 987 SUPERFAMILY Calcium ATPase, transmembrane domain M 18 883 IPR023298 -
Mch8g2640 987 PRINTS H+-transporting ATPase (proton pump) signature 448 466 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch8g2640 987 PRINTS H+-transporting ATPase (proton pump) signature 563 579 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch8g2640 987 PRINTS H+-transporting ATPase (proton pump) signature 796 817 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch8g2640 987 Gene3D - 936 987 - -
Mch8g2640 987 SFLD C1.7: P-type atpase like 314 675 - -
Mch8g2640 987 Coils Coil 938 958 - -
Mch8g2640 987 PRINTS P-type cation-transporting ATPase superfamily signature 624 643 - -
Mch8g2640 987 PRINTS P-type cation-transporting ATPase superfamily signature 486 497 - -
Mch8g2640 987 PRINTS P-type cation-transporting ATPase superfamily signature 647 659 - -
Mch8g2640 987 PRINTS P-type cation-transporting ATPase superfamily signature 182 196 - -
Mch8g2640 987 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Mch8g2640 987 PRINTS P-type cation-transporting ATPase superfamily signature 508 518 - -
Mch8g2640 987 SFLD p-type atpase 314 675 IPR044492 -
Mch8g2640 987 Pfam Cation transporter/ATPase, N-terminus 21 84 IPR004014 -
Mch8g2640 987 Pfam E1-E2 ATPase 134 311 - -
Mch8g2640 987 Gene3D - 69 139 - -
Mch8g2640 987 Gene3D - 592 882 - -
Mch8g2640 987 FunFam Plasma membrane ATPase 135 219 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0624 Mch-Chr11:4012489 Mch8g2640 Mch-Chr8:29630087 0 dispersed
Mch8g0384 Mch-Chr8:2734768 Mch8g2640 Mch-Chr8:29630087 0 dispersed
Mch8g1083 Mch-Chr8:7660825 Mch8g2640 Mch-Chr8:29630087 0 dispersed
Mch8g2640 Mch-Chr8:29630087 Mch8g3015 Mch-Chr8:32754980 0 dispersed
Mch6g0513 Mch-Chr6:3459876 Mch8g2640 Mch-Chr8:29630087 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2640 K01535 - csv:101221564 1778.07