Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2678 ATGGATAGCCCTTCCACGACCCCGAGCTCAGCCCCTAATTCCTCTCCTGTCTCCAATCCCGGTTCTAATGACGAAAACCCGCGCGTTAAATTCCTATGCAGTTTCTTGGGAAGCATAATGCCTCGCCCACAAGATGGCAAGCTTCGGTATGTTGGGGGTGAGACAAGGATTGTGAGTGTTCCGAGGGATATTACATATGAGGAGTTGATGCTTAAGATGAGGGAACTCTATGAAGGGGCTGCAGTATTGAAGTACCAGCAGCCAGATGAGGATCTTGATGCTCTTGTGTCTGTTGTCAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCAGGTGACGGGTTCACTCGACTTAGGATATTCTTGTTTTCGCACCCTGATCAAGATGGTTCTTTGCCTTTTGTTGATGGGGATGAGAGGGATACTGAGAGGAGATATGTAGATGCTCTTAATAATTCAAATGAAATGAATGATTTTGCTAGACAGCAGCAGCCTGATTCCCCAGTAATTAGTGGCATGGATGATATGCACGGGATGGAACATTTTTTGAATCCAATGAATATTGAAGGTAGTCTTCACACCCAGAGGAGTTGTGAGCCCTTGTCACAATATCACCTGCATCAGCTCACAGTCCCTCATGCTGGATCTGGGCAGCAGCAACAATCTGTAGCTCAAAGGTATAATGAAATGGAAGCTCCCTGGAGTCCTGCTTATCTTTCCCCCAGGCATCACGGTCACTTTGATCCACGACCGGTGGGAGAATATCCGTCGTCTCCTTCTCGGTACCGTATGCCATTCCCAGATGTGCCAGATAAATATTTGGAAAGAATGCCTGAAGAGTATGCAAGGCAGCAAATGAGTCACCAGCATATGTATGAACATCAACCACAGTATAATGAGAATGTTGTCTGGCTGCCAAATGGAGCAATTAGTGAAAAGTCGGGTTTCCCGGGTAACATTTTACATGGACACGGTGTCCTTGAGGGGAATAGTTCTTGTGAACACTGCCGGGGAAATTTCCATCGGTATCAAACACCAATGGAGCAAGGGAATATGTTGAATGGACTTCCCACTGAATACCCTCAGAATAGGGAGGCCTTCATTCAAAAGGCAGATGCGAAGTTCCATCATGGTATTTTCCCAAATGAGCAGAATATGAATGATCATCGATCTGCTTATAATGAGACACCTCCCCATGAGCGCGGATGGATTATGCAACATCAGTTGAACGTGCGGGGGGATGACACGAGAGCACATGTCTCTGGGGCTGGAAGATTGAATGATCACTATATTGTGGATGGCTCCGGCTCAAATTTTCCTCCTGCACAAAGTAATTTAGCTGATGGCTACCATTCATCGATGAATTTTCACGATGAGGTGTTCCGTGACCAAGTGGTGCCTAGTGGGTCACATATGGGTATCCCTCCTCCTGAAGAACGCGGTGTTGGCTATATGAATATGCCATATGCATATGGAGGCGATCCTCAATATCCTCCAATGGCACACAGGCATATGCCTGGAAATTCCTTGTGGAGAAATGTTCAGAACCCAGTACATGTTGCTACCCCTTACGAAGCATCCATGTCCCTTCAGCAAGGGAATACTCCTGTTAATCCAGGATATATCAGGGGTATGCAGGAGGGTAGTCCACGGGTCCATATCGGTATGGACCACCAAAATCCTTGGCATGAGTCCTCACAAAAATTGCTGGGTATTGAGGGAGCCACTGGTTCAGAGCATGTACCTGCACATGCTTTGAATACTAACTCAACCGCTGTTGGCCATGACAATCAGCGCTTCTCGAGCATTGAACGAATTCAACCACAGCTGGATAAGATAAACCTTGTCACCTCTCCTGAGGTTCTCCAGAGGTCTAATTCAGCTTCAGTGTTTATGCATGATAAATTGGTTGCACCTTTTCCTTCTAGCCAAAATCCACTACCAAGGGCTGTTAGTGGGGTCAATGAAGCTATGACGATGGAAGGAAAAATTTTGCATGGAGAAGGAAACGGACACGTGATAACCGATGTTGGGAGAGTCAACATCGATGCACACGGTGTTTCTCATCCAGAGCAGAATAACACTGATGATACATATTCCAAGGTTGCACTCCCTGAGTCGTTAAATTCAAATGGCATGAACACTCCAGTTGAGAATGGTGATGGCTTGAAACCAGCTGAAGATCCTCAACTTTCTGTTAATCGCCTGAGATTCTTACCCGAGTTGATTGCATCTGTGAAGAGAGCAGCATTAGAAGTATCTGAAGATGCAATAATTGAAGAAACCGCCCTAGCAAGGCCTGATTCAATGGAAAAAAAGGAAACCGAAAATGAGCCCGACTCCTTGAATGCCCATGGGGAACCCGAGTTGGATACTGATAATGACCATCAAAGCTCCAGAATTGAGCCAACAAAGGCTGAAGCAGAAGCCATTTCAAGGGGATTACAAACAATTAAAAATGACGATCTGGAGGAGATTCGTGAATTAGGGTCTGGGACTTATGGTGCTGTTTATCATGGGAAATGGAGAGGTTCTGATGTTGCCATCAAGAGGATCAAAGCTAGCTGTTTTGCTGGGCGGCCATCGGAAAGGGAACGTTTGATTGCGGATTTTTGGAAGGAAGCTTTGATATTAAGTTCTTTACACCATCCAAATGTTGTTTCCTTCTATGGAATTGTCCGTGATGGTCCTGATGGGTCCTTAGCAACAGTGACTGAGTTCATGGTAAATGGATCATTGAAACAGTTTTTGCACAAGAAGGACAGGACCATTGATCGTCGGAAAAGACTCATTATAGCTATGGATGCTGCATTCGGGATGGAATATTTGCATGGGAAGAATATTGTACATTTTGATTTGAAATGTGAAAATCTTTTAGTGAATATGAGAGATCCACAGAGGCCTGTTTGCAAGATCGGGGATTTGGGATTGTCAAAGGTAAGACAACACACATTAGTATCAGGAGGCGTTCGTGGAACTCTGCCATGGATGGCACCGGAGCTTCTTAGTGGGAAAAGTAACATGGTGACAGAGAAGATTGATGTTTACTCATTCGGGATTGTTATGTGGGAACTGCTTACTGGTGATGAACCGTATGCGGATATGCATTGTGCTTCCATAATCGGAGGGATTGTAAATAATTCTTTACGTCCAGAAATCCCGACATGGTGCGACCCTGAATGGAAGGCTTTAATGTCAAGCTGTTGGGACTCTGAACCAGCTATGAGACCATCATTTTCAGAAATTTCTCAGAAGCTAAGGAATATGGCAGCGGCAATGAATGTGAAATAG 3306 45.01 MDSPSTTPSSAPNSSPVSNPGSNDENPRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPRDITYEELMLKMRELYEGAAVLKYQQPDEDLDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSHPDQDGSLPFVDGDERDTERRYVDALNNSNEMNDFARQQQPDSPVISGMDDMHGMEHFLNPMNIEGSLHTQRSCEPLSQYHLHQLTVPHAGSGQQQQSVAQRYNEMEAPWSPAYLSPRHHGHFDPRPVGEYPSSPSRYRMPFPDVPDKYLERMPEEYARQQMSHQHMYEHQPQYNENVVWLPNGAISEKSGFPGNILHGHGVLEGNSSCEHCRGNFHRYQTPMEQGNMLNGLPTEYPQNREAFIQKADAKFHHGIFPNEQNMNDHRSAYNETPPHERGWIMQHQLNVRGDDTRAHVSGAGRLNDHYIVDGSGSNFPPAQSNLADGYHSSMNFHDEVFRDQVVPSGSHMGIPPPEERGVGYMNMPYAYGGDPQYPPMAHRHMPGNSLWRNVQNPVHVATPYEASMSLQQGNTPVNPGYIRGMQEGSPRVHIGMDHQNPWHESSQKLLGIEGATGSEHVPAHALNTNSTAVGHDNQRFSSIERIQPQLDKINLVTSPEVLQRSNSASVFMHDKLVAPFPSSQNPLPRAVSGVNEAMTMEGKILHGEGNGHVITDVGRVNIDAHGVSHPEQNNTDDTYSKVALPESLNSNGMNTPVENGDGLKPAEDPQLSVNRLRFLPELIASVKRAALEVSEDAIIEETALARPDSMEKKETENEPDSLNAHGEPELDTDNDHQSSRIEPTKAEAEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFAGRPSERERLIADFWKEALILSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWELLTGDEPYADMHCASIIGGIVNNSLRPEIPTWCDPEWKALMSSCWDSEPAMRPSFSEISQKLRNMAAAMNVK 1101
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30062394 30069313 - MC08g2114 Mch8g2678 696299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2678 1101 PANTHER SERINE-THREONINE PROTEIN KINASE 9 1095 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Mch8g2678 1101 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 916 1101 - -
Mch8g2678 1101 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 821 915 - -
Mch8g2678 1101 Pfam Protein tyrosine and serine/threonine kinase 830 1091 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2678 1101 Pfam PB1 domain 44 128 IPR000270 GO:0005515(InterPro)
Mch8g2678 1101 Gene3D Transferase(Phosphotransferase) domain 1 915 1101 - -
Mch8g2678 1101 MobiDBLite consensus disorder prediction 1 26 - -
Mch8g2678 1101 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 48 130 - -
Mch8g2678 1101 ProSiteProfiles Protein kinase domain profile. 828 1094 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2678 1101 SUPERFAMILY CAD & PB1 domains 45 134 - -
Mch8g2678 1101 CDD STKc_MAP3K-like 834 1091 - -
Mch8g2678 1101 MobiDBLite consensus disorder prediction 767 805 - -
Mch8g2678 1101 MobiDBLite consensus disorder prediction 712 733 - -
Mch8g2678 1101 Gene3D - 47 130 - -
Mch8g2678 1101 SUPERFAMILY Protein kinase-like (PK-like) 815 1089 IPR011009 -
Mch8g2678 1101 SMART serkin_6 828 1097 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2678 1101 MobiDBLite consensus disorder prediction 1 25 - -
Mch8g2678 1101 CDD PB1_UP2 32 128 - -
Mch8g2678 1101 ProSitePatterns Serine/Threonine protein kinases active-site signature. 953 965 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2678 1101 Gene3D Phosphorylase Kinase; domain 1 813 914 - -
Mch8g2678 1101 ProSitePatterns Protein kinases ATP-binding region signature. 834 855 IPR017441 GO:0005524(InterPro)
Mch8g2678 1101 PRINTS Tyrosine kinase catalytic domain signature 947 965 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2678 1101 PRINTS Tyrosine kinase catalytic domain signature 1018 1040 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2678 1101 PRINTS Tyrosine kinase catalytic domain signature 1062 1084 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2678 1101 PRINTS Tyrosine kinase catalytic domain signature 910 923 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2678 1101 SMART PB1_new 43 128 IPR000270 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0173 Mch-Chr5:1110990 Mch8g2678 Mch-Chr8:30062394 1.14E-154 dispersed
Mch6g0745 Mch-Chr6:5105857 Mch8g2678 Mch-Chr8:30062394 2.56E-132 dispersed
Mch7g1239 Mch-Chr7:15937435 Mch8g2678 Mch-Chr8:30062394 1.95E-47 dispersed
Mch8g0050 Mch-Chr8:290535 Mch8g2678 Mch-Chr8:30062394 1.26E-23 dispersed
Mch8g2678 Mch-Chr8:30062394 Mch9g2102 Mch-Chr9:21974676 9.86E-31 dispersed
Mch9g1929 Mch-Chr9:20801981 Mch8g2678 Mch-Chr8:30062394 4.75E-23 dispersed
Mch8g2678 Mch-Chr8:30062394 Mch3g1293 Mch-Chr3:15855177 1.57E-149 transposed
Mch8g2678 Mch-Chr8:30062394 Mch6g0657 Mch-Chr6:4476262 2.05E-148 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77635 PF07714 PK_Tyr_Ser-Thr 1.10E-61 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2678 - - - 0.0