Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2681 ATGCACCCATATTCCTCACCCTTCTTCATTCTCAATTTTCAAACCCTCGCACACCATTCTAAGAAGCTACTCTCGTTGCAATTCTCCTTTTCAAGAATGGCTTTTCTAGAGGTAAAACAGCAACTCCTGAGTGAGATTGAAGCTTTGGGATTCCCTAGGGCTCGAGCAGTCCGAGCGCTTCATAATACCGGCAATGTCAGCTCTGAAGTTGCAATAAATTGGATCATTGATCATGAGAGTGATCCAGATATAGATCGAATGCCCCTGGTGGCAGTAAACATTGATATTGAACCTTCTGAACCATTTCATATCACAGAAGATATGAAAAGGAAAGCTAAGGAGCTAAGGAATCAAATGCGTCAGGAAAAGGAAGAAGAAGAAGAGAAGTCAGAAAGACAAAGAGAGAAGGATAGAATTCGTTCTGGTAAAGAACTGCAAGAAGCAAAAAGAATTGCAGAAGAAACTGAAAGGAAACGGTATATAGATTCTAGGCAAGCTGAGAAACGGGAGGAGAAAAACGCCAGGGAAAAAGTTTTACAGAAACTTGAACAAGATAAGATAGAAAGAAAGAGGAATCTTGGAATGACCTCTGAAAGGCTTGCTACAAAACCTACCGCAACCGGAACAGGGGAAAAGGATGAATTTAATCCACAGAATTCGCTGCCAGCAATTTCTGTTGGTATAGCAGTCTCTATGAGAGAATGTTTAAGGTCTCTTAAGCACCATCGAAAGGATGATTCTGAAAAAGTGAGAAAGGCCTTCCAAACCCTCTTCATCTATGTCAGGAATGTTGCAAAAAAACCTGATGAGGAAAAGTTTAGGAAGATTCGACTTAGTAACCCTTTGTTCCAGGAGAGAGTTGGGAGTTTGAAGGGAGGAATTGAGTTTCTTGAACTTTGTGGCTTTCAGAGAAAAGGAGAGTTTCTGTACCTTCCTCGCGATAAAGTCGACCCGAGAGTTTTATTCACTGCTGGATCACTGTTGGAATCTGCATTGACAAATCCCTTTTTTGGTATTCTACAATCAGTTTGA 1032 40.99 MHPYSSPFFILNFQTLAHHSKKLLSLQFSFSRMAFLEVKQQLLSEIEALGFPRARAVRALHNTGNVSSEVAINWIIDHESDPDIDRMPLVAVNIDIEPSEPFHITEDMKRKAKELRNQMRQEKEEEEEKSERQREKDRIRSGKELQEAKRIAEETERKRYIDSRQAEKREEKNAREKVLQKLEQDKIERKRNLGMTSERLATKPTATGTGEKDEFNPQNSLPAISVGIAVSMRECLRSLKHHRKDDSEKVRKAFQTLFIYVRNVAKKPDEEKFRKIRLSNPLFQERVGSLKGGIEFLELCGFQRKGEFLYLPRDKVDPRVLFTAGSLLESALTNPFFGILQSV 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30085408 30089801 - MC08g2117 Mch8g2681 696302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2681 343 MobiDBLite consensus disorder prediction 191 219 - -
Mch8g2681 343 SMART PGNneu 252 313 - -
Mch8g2681 343 Gene3D - 235 328 - -
Mch8g2681 343 MobiDBLite consensus disorder prediction 198 219 - -
Mch8g2681 343 SUPERFAMILY PUG domain-like 239 336 IPR036339 -
Mch8g2681 343 SUPERFAMILY UBA-like 36 88 IPR009060 GO:0005515(InterPro)
Mch8g2681 343 CDD UBA_PUB_plant 37 85 - -
Mch8g2681 343 PANTHER F13M7.16 PROTEIN 33 340 - -
Mch8g2681 343 Gene3D - 40 84 - -
Mch8g2681 343 MobiDBLite consensus disorder prediction 115 151 - -
Mch8g2681 343 Pfam PUB domain 248 317 IPR018997 -
Mch8g2681 343 Coils Coil 105 140 - -
Mch8g2681 343 Coils Coil 165 188 - -
Mch8g2681 343 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 37 78 IPR015940 -
Mch8g2681 343 Pfam UBA-like domain 40 85 IPR015940 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g0857 Mch-Chr7:13138096 Mch8g2681 Mch-Chr8:30085408 1.11E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2681 - - - 0.0