Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2697 ATGGGTGTGGTGGAAGAGTACTTGCCAGAAATGGCCATGGTTGGTGTTCAGCTCACTTACGCTGTAATGACTCTCATCTCCCGCGCCGCCCTCCTCCAAGGCACGAGCCCTCGAGTCTTCGTCGTCTATCGTCAAGCCATTGCCACCATCGTCTTTGCACCCATTGCTTACTTCTCTAGGCCTAGATCCACGAGGATCTCCTTGAACTTGAAGAGCTTTTCTCTCATATTTCTCGCTGCTCTAATCGGGGCAACAATAAATCAGAACGCTTACTTTGAAGGAATTTTGTTAGCAACCTCATCGTTGGCGATAGCGATGATGAATCTAATTCCGGCCATTACATTTGTGATGGCTACCATTTTCAGAATGGAGAGTGTGAAGATAAGAAGCTTGAGGAGCATAGCGAAGATGGGAGGGACAGTGATCTGTGTTGGTGGGGCCATTTGCATGGCCCTTCTGAGGGGTCCAAAGCTTCTCAATGGCACACGTGGTGATCACGTGGTGAAATCTGCCATAATATTTAGTGTGAAAAGTGAAAGTGATGACACTTGGTTATTGGGTTGCTTGTCTCTGTTTGTGTGTTGCTGCTGCTGGTCAATTTGGCTGATTTTACAGGTACCAGCATTAGCAATCTATCCCGACAACTTATCTTTCTCAACATGGGTGTGTTTCTTTTCCACGATACAGTCAATCATCGTTGCTCTATTGGTAGAGCGAAACAATTTTGAAGTATGGAAAATACATTCAAGTATTGAAGTGACTTCTTATCTCTTCTCGGGAATAGTTGGGTCAGGTGCTGCCTTCTTTGTTCAAGCTTGGTGTGTTTCAAAAAGAGGCCCTGTCTTCTCTGCAACTTTCAACCCTCTTGCCACCATTATTGTTACTATTTTGGCTGCTATATTTCTTCATGAGGAGATTTTTACCGGAAGTTTATTGGGGGGCGTGGTTGTAATTATTGGATTGTACATTGTCCTTTGGGGAAAAGCAAAAGATTATGCGAAGGAAGAAACCTCAGAGAAGCTAAGTGTTGAAGAAGAAGATAAAGAAGATCAAGAGGAAGGTTGTGAGACAGCTGAGGCAGAGACAAGCCACTCTAAGATTGATTTGGAGGAACCATTTTTG 1122 44.3 MGVVEEYLPEMAMVGVQLTYAVMTLISRAALLQGTSPRVFVVYRQAIATIVFAPIAYFSRPRSTRISLNLKSFSLIFLAALIGATINQNAYFEGILLATSSLAIAMMNLIPAITFVMATIFRMESVKIRSLRSIAKMGGTVICVGGAICMALLRGPKLLNGTRGDHVVKSAIIFSVKSESDDTWLLGCLSLFVCCCCWSIWLILQVPALAIYPDNLSFSTWVCFFSTIQSIIVALLVERNNFEVWKIHSSIEVTSYLFSGIVGSGAAFFVQAWCVSKRGPVFSATFNPLATIIVTILAAIFLHEEIFTGSLLGGVVVIIGLYIVLWGKAKDYAKEETSEKLSVEEEDKEDQEEGCETAEAETSHSKIDLEEPFL 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30211045 30214423 - MC08g2127 Mch8g2697 696318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2697 374 MobiDBLite consensus disorder prediction 336 374 - -
Mch8g2697 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
Mch8g2697 374 PANTHER WAT1-RELATED PROTEIN 11 342 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Mch8g2697 374 MobiDBLite consensus disorder prediction 357 374 - -
Mch8g2697 374 Coils Coil 334 361 - -
Mch8g2697 374 MobiDBLite consensus disorder prediction 342 356 - -
Mch8g2697 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 329 - -
Mch8g2697 374 Pfam EamA-like transporter family 12 134 IPR000620 GO:0016020(InterPro)
Mch8g2697 374 Pfam EamA-like transporter family 186 325 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0577 Mch-Chr6:3932659 Mch8g2697 Mch-Chr8:30211045 3.90E-116 dispersed
Mch7g0981 Mch-Chr7:14096394 Mch8g2697 Mch-Chr8:30211045 1.71E-15 dispersed
Mch8g0813 Mch-Chr8:5723787 Mch8g2697 Mch-Chr8:30211045 8.33E-73 dispersed
Mch8g1953 Mch-Chr8:21315350 Mch8g2697 Mch-Chr8:30211045 2.10E-47 dispersed
Mch8g2697 Mch-Chr8:30211045 Mch9g1707 Mch-Chr9:19031676 6.14E-64 dispersed
Mch8g2696 Mch-Chr8:30207880 Mch8g2697 Mch-Chr8:30211045 4.94E-130 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2697 - - - 0.0