Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g2727 | ATGTTTGATTGTGGTTACAAGTCACAACTGATGGGTGGTCAGCGAGAAAAGTTTGTGAGGTTGGATGACTTGGACTCTAGATTGTCATCCCCTTCTGATGGTGGAATGAGAAGATGTGGTTTTAATATAGATGGATTTAACCGTGCAGTTCATGGAAATGATAAGCCATCTGGATCGTTTAAGAGAGGAATGAGAAAAGGGTCCGAAGGACTTAAATCAATTGGTCGATCACTCAAGTTTGGGGTTTCTCGAGCTGTATTTCCCGAGGATCTTAAAGAGTCAAAGAAGAAGATATTTGATCCTCAAGACAAATTGCTCTTATTTTTGAATAAACTCTTTGTCATATCATGTATTTTGGCAGTATCTGTGGATCCACTGTTCTTTTATGTTCCTGTCATTAACAAAACCTCAAACTGTCTTGGTATTGATAGAAAGCTGGCGATTATAGTGACCACGTTGCGGACAATTATTGATGTTTTCTATCTTATTCATATGGCTCTCCAATTCCGGACAGCTTATATTGCTCCATCATCTCGGGTGTTTGGGAGAGGTGAACTTGTGATTGATCCTGCACAAATAGCGAAGCGATACTTGCGGCGGTATTTCATCATTGATTTGATTTCTGTGCTACCCCTTCCACAGATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAGGTTCAGATGTATATGTGACAAAACAGGCCCTTCTTTTAATCGTGTTCCTTCAATATATCCCGAGATTTTTTAGAATGTTACCTTTGGCTTCAGAATTGAAAAGGACAACAGGCGTATTTGCAGAAACTGCTTGGGCGGGTGCTGCATGTTATTTGTTATTATATATGCTTGCTAGTCATATAGTTGGAGCATTATGGTATTTATTAGCCGTGGAACGCAATGATACGTGTTGGCAGAAGTTTTGTAATGGGGTCTGCACGAAAGAATTCTTATATTGTGGTAACCAGGACATGGAAGGTTACGCAACTTGGAACAAGACAGGACTGGGTGTCCTTCAGTCAAATTGCAAACCTGCTGATGAGAATGATCAGTTTGATTTTGGAATCTTTCAACAGGCCTTGTCCTCTGGTATTGCCTCATCCAAGGATTTTATAGCCAAATATTGTTACTGTCTATGGTGGGGCCTACAAAACTTAAGTACGCTTGGGCAGGGGCTGCAAACAAGCACCTATCCGGGTGAAGTGATATTTTCTATAGCATTGGCTGTACTTGGTCTCATCCTCTTTGCACTTCTAATTGGCAACATGCAGACTTATCTTCAATCTCTAACTATAAGGCTTGAGGAAATGAGGGTGAAAAGGCGAGATTCTGAGCAGTGGATGCATCACCGCTTGCTGCCGCAGGAACTTCGGGAGAGGGTCCGACGTTATGATCAGTACAAGTGGTTGGAGACGCGTGGGGTGGATGAACAGAGTTTGGTACAAACTCTACCGAAGGATCTTAGAAGAGATATTAAGCGCCATCTTTGTCTGGCTTTAGTAAGGAGGGTTCCTCTGTTTGAAAGCATGGATGAGAGGCTGCTCGATGCTATCTGTGAGCGGTTGAAACCGTGTTTGTTTACGGAGTACACTTACATTGTCCGTGAAGGTGATCCAGTTGATGAGATGCTTTTCATTATACGTGGTCGGCTTGAGAGTGTGACTACAGATGGTGGGCGGAGTGGATTTTTCAACCGTACCTTCCTAAAAGAAGGCGACTTTTGTGGTGAAGAGCTTTTGACCTGGGCTCTGGATCCGAAATCTGGTTCGAACCTTCCTTCCTCTACACGGACAGTAAAGGCTATTACAGAGGTCGAGGCTTTCGCCCTCGTTGCTGAAGAGTTGAAATTCGTGGCCAGTCAGTTCAGGCGTCTTCACAGTAGGCAGGTGCAACATACCTTCCGATTCTACTCGCAGCAGTGGAGGACCTGGGCTGCTTGCTTCATCCAAGCAGCATGGCGTCGGTATTCCAAGAGAAAGTCTATGGAACTTCGTCAAAAGGAAGAAGCTGCAGCGGAAGAATCCGAGGGATCTCAAACTGCCACGAGCGGAGGCTCTTATAGCATTCGTGCAACTTTCTTAGCTTCCAAGTTTGCTGCAAATGCTCTCCGGGGCGTTCAGCGATATCGCAACGCCAAGAGTGCTCAGGAGTTGATAAAATTGCAGAAGCCTCCAGAGCCAGATTTTAGCGCTGATGATGCAGATTGA | 2202 | 44.28 | MFDCGYKSQLMGGQREKFVRLDDLDSRLSSPSDGGMRRCGFNIDGFNRAVHGNDKPSGSFKRGMRKGSEGLKSIGRSLKFGVSRAVFPEDLKESKKKIFDPQDKLLLFLNKLFVISCILAVSVDPLFFYVPVINKTSNCLGIDRKLAIIVTTLRTIIDVFYLIHMALQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLRRYFIIDLISVLPLPQIVVWRFLQRSKGSDVYVTKQALLLIVFLQYIPRFFRMLPLASELKRTTGVFAETAWAGAACYLLLYMLASHIVGALWYLLAVERNDTCWQKFCNGVCTKEFLYCGNQDMEGYATWNKTGLGVLQSNCKPADENDQFDFGIFQQALSSGIASSKDFIAKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAVLGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLETRGVDEQSLVQTLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTEYTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKEGDFCGEELLTWALDPKSGSNLPSSTRTVKAITEVEAFALVAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKSMELRQKEEAAAEESEGSQTATSGGSYSIRATFLASKFAANALRGVQRYRNAKSAQELIKLQKPPEPDFSADDAD | 733 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 30492069 | 30504896 | + | MC08g2157 | Mch8g2727 | 696348 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g2727 | 733 | Pfam | Cyclic nucleotide-binding domain | 529 | 614 | IPR000595 | - | |
Mch8g2727 | 733 | Pfam | Ion transport protein | 112 | 430 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Mch8g2727 | 733 | Gene3D | Helix hairpin bin | 432 | 495 | - | - | |
Mch8g2727 | 733 | ProSiteProfiles | IQ motif profile. | 640 | 669 | - | - | |
Mch8g2727 | 733 | FunFam | Cyclic nucleotide-gated ion channel 1 | 431 | 495 | - | - | |
Mch8g2727 | 733 | CDD | CAP_ED | 504 | 635 | IPR000595 | - | |
Mch8g2727 | 733 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 504 | 588 | IPR000595 | - | |
Mch8g2727 | 733 | Gene3D | Jelly Rolls | 502 | 622 | IPR014710 | - | |
Mch8g2727 | 733 | SUPERFAMILY | Voltage-gated potassium channels | 101 | 426 | - | - | |
Mch8g2727 | 733 | SMART | cnmp_10 | 504 | 635 | IPR000595 | - | |
Mch8g2727 | 733 | SUPERFAMILY | cAMP-binding domain-like | 433 | 624 | IPR018490 | - | |
Mch8g2727 | 733 | FunFam | Cyclic nucleotide-gated ion channel 1 | 502 | 620 | - | - | |
Mch8g2727 | 733 | PANTHER | CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED | 83 | 721 | - | - | |
Mch8g2727 | 733 | Gene3D | - | 111 | 429 | - | - | |
Mch8g2727 | 733 | PRINTS | EAG/ELK/ERG potassium channel family signature | 282 | 292 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Mch8g2727 | 733 | PRINTS | EAG/ELK/ERG potassium channel family signature | 467 | 474 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Mch8g2727 | 733 | PRINTS | EAG/ELK/ERG potassium channel family signature | 154 | 164 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Mch8g2727 | 733 | PRINTS | EAG/ELK/ERG potassium channel family signature | 373 | 390 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Mch8g2727 | 733 | PRINTS | EAG/ELK/ERG potassium channel family signature | 417 | 426 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Mch8g2727 | 733 | PRINTS | EAG/ELK/ERG potassium channel family signature | 165 | 174 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
Mch8g2727 | 733 | PRINTS | EAG/ELK/ERG potassium channel family signature | 399 | 410 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch10g0079 | Mch-Chr10:445364 | Mch8g2727 | Mch-Chr8:30492069 | 4.40E-139 | dispersed | |
Mch5g0470 | Mch-Chr5:3180785 | Mch8g2727 | Mch-Chr8:30492069 | 1.91E-202 | dispersed | |
Mch8g1531 | Mch-Chr8:11952081 | Mch8g2727 | Mch-Chr8:30492069 | 1.65E-230 | dispersed | |
Mch8g1592 | Mch-Chr8:12749781 | Mch8g2727 | Mch-Chr8:30492069 | 0 | dispersed | |
Mch8g2727 | Mch-Chr8:30492069 | Mch9g0659 | Mch-Chr9:4957895 | 1.06E-220 | dispersed | |
Mch8g2727 | Mch-Chr8:30492069 | Mch6g1858 | Mch-Chr6:21088339 | 5.63E-262 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g2727 | K05391 | - | csv:101219180 | 1375.92 |