Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2748 ATGGCCAGTGATCTAAACACACGACTCTCAAAGAAAACAAATCTTTTTGGTCTCCAAGTGTGGGAGCTCATAGGAATTGGAGTAGGCCTCGTCATCCTCTCCATCCTCTGCCTCCTCTCACTCTGTTTAACTTCACTTAAGAAGAAGTCAAAAAAGCCAACAAACAGCTTCCCTCTCACTCAAATCCCAACTCTTTCAAAGGAAATAAAGGCAGTGGAAGACAACATAACAATCCACATGGGGAAGGAGAAGAGTTACAGCAGTGAATCAGGGTCATTTCTTCATCCATTGGCTTTTGGCTATGGATCTCAGTCAGGGGATGAAGGCAGCTCTGGCACTGTCACAATGTACAGACCCTTTTCGTCGTCCCCGACCACGGTGGTCCGTTCGCCACTGGCCGGGCTGCCGAACGTGGCTCGGTTGGGGTGGGGCTACTGGTTTACTCTGAGAGAGCTGGATCTTGCCACAAACTTGTTCTCCCAAGAGAATGTCATTGGGGAAGGTGGGTATGGAGTTGTGTATAGAGGATGCTTGCTCAATGGGACACCAGTGGCAGTCAAGAAGATTCTCAATAGCCAGGGCCAAGCAGAGAAGGAATTCAGAGCGGAAGTAGAAGCAATTGGGCATGTGCGCCACAAGAATTTGGTTCGTCTTCTGGGATACTGCATTGAAGGGACTCATAGGATGCTTGTTTACGAGTATGTAAACAATGGAAGCTTAGAGCTGTGGCTGCATGGAGGAATGGGAGAGAATACACATCTTACGTGGGACGCTCGCATGAAGATCATGCTCGGGACTGCCAAAGGGCTTGCGTACTTGCATGAGGCAATCGAGCCAAAGGTTGTGCATCGAGACATCAAAGCAAGCAACATTCTAATAGACGAGAATTTCAATGCCAAGCTATCAGACTTTGGGCTGGCCAAGTTGATGGATGCTGGGAAGACTCATGTTACAACACGAGTTATGGGCACATTTGGATATGTAGCTCCTGAATATGCAAATACCGGGCTTTTGAACGAGAAGAGCGATGTGTATAGCTTTGGAGTTGTGCTGGTAGAGACAATCACATGA 1071 47.9 MASDLNTRLSKKTNLFGLQVWELIGIGVGLVILSILCLLSLCLTSLKKKSKKPTNSFPLTQIPTLSKEIKAVEDNITIHMGKEKSYSSESGSFLHPLAFGYGSQSGDEGSSGTVTMYRPFSSSPTTVVRSPLAGLPNVARLGWGYWFTLRELDLATNLFSQENVIGEGGYGVVYRGCLLNGTPVAVKKILNSQGQAEKEFRAEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGSLELWLHGGMGENTHLTWDARMKIMLGTAKGLAYLHEAIEPKVVHRDIKASNILIDENFNAKLSDFGLAKLMDAGKTHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLVETIT 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30661916 30666053 + MC08g_new0574 Mch8g2748 696369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2748 356 ProSiteProfiles Protein kinase domain profile. 159 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2748 356 Pfam Protein kinase domain 160 355 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2748 356 FunFam Putative receptor-like serine/threonine-protein kinase 235 356 - -
Mch8g2748 356 Gene3D Phosphorylase Kinase; domain 1 142 234 - -
Mch8g2748 356 FunFam serine/threonine-protein kinase PBS1-like 135 234 - -
Mch8g2748 356 SMART serkin_6 159 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2748 356 Gene3D Transferase(Phosphotransferase) domain 1 235 356 - -
Mch8g2748 356 SUPERFAMILY Protein kinase-like (PK-like) 139 356 IPR011009 -
Mch8g2748 356 ProSitePatterns Protein kinases ATP-binding region signature. 165 188 IPR017441 GO:0005524(InterPro)
Mch8g2748 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2748 356 PANTHER OS01G0323000 PROTEIN 1 356 IPR052232 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1301 Mch-Chr3:15904525 Mch8g2748 Mch-Chr8:30661916 8.36E-40 dispersed
Mch8g0674 Mch-Chr8:4797631 Mch8g2748 Mch-Chr8:30661916 3.32E-120 dispersed
Mch8g2748 Mch-Chr8:30661916 Mch6g0807 Mch-Chr6:5618986 2.91E-79 dispersed
Mch7g1272 Mch-Chr7:16185821 Mch8g2748 Mch-Chr8:30661916 5.13E-143 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77636 PF00069 Pkinase 3.00E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2748 - - - 0.0