Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2775 ATGGAAGAGCCTCTGTTGCAAAAAGTGTGCGCCCTGTACCGCCAAATCTCGAGCCTTGAGAGCCTGAAGCCGTCCAAAAATGTCGACACTCTTTTCACCCAACTGGTGGTCACGTGCTGCCCCCCTGCCCCTGGCCTCGACATCTCCTCCCTCCCACACTCCCTTCAGTCCATGCGAGCCCACCTCATCCGCCTCTGCGCCAGCGCCGAGGCGCTCTTGGAGGTTCACTTCTCTTCCATCCTCGCCTCCTCCTTCCCCAACCCCATTCACAATCTCTCCATCTTCCCCTACTACTCTAACTACTTGAAGCTCTCTCTTCTCGAGTTCGATATTCTCCGCTCTCATTGCCGCCGTCCCCCCGCTAGCGTCGCGTTTGTTGGCTCCGGCCCCCTCCCGCTCTCCTCCATTGTCCTGGCCTCCGCTCACATGAAAGGGACGATTTTTCATAACTTTGATATTGACCCGATTGCGAACTCGATGGCGGGTCGATTGGTCGGGTCGGACCCAGACCTATCGCAGCGGATGATGTTTCACACGGCCGATGTGATGGAGGTGACAACAGGACTTGGGGAGTACGAGGTGGTGTTTTTGGCGGCGTTAGTGGGAGTGGAGGAGGAGGAGAAGGGGAAGGTTTTGAGGCATTTGGGGAAGCATATGGCGCCCGGGGCTTATTTGATGCTGAGGAGTGCGCATGGCGCTAGGGCTTTTTTGTACCCTGTTGTTGACGTTTGTGAGGTTGAAGCTTCTGGATTCGAGGTTCTGTCTGTGTTTCATCCTACTGATGAAGTTATAAACTCTGTTGTTATTGCTAGAAAGCTGTTTGATCTCGTCCCAACTACTGGAGGAAGCTCCAGTAACGAAGACGAAGATGATCAAAACGACGATGATGATACTGATGACGAGAAGCAGGGTATTTTGAACAATACTCCTATTGTGTTGACTGAGAAGTACTCTGGGTTCAAGGCTTTTAGTCCTATGATTGAAGAACTTGCCATGGAGGAACAACTTTCTTGA 1014 52.56 MEEPLLQKVCALYRQISSLESLKPSKNVDTLFTQLVVTCCPPAPGLDISSLPHSLQSMRAHLIRLCASAEALLEVHFSSILASSFPNPIHNLSIFPYYSNYLKLSLLEFDILRSHCRRPPASVAFVGSGPLPLSSIVLASAHMKGTIFHNFDIDPIANSMAGRLVGSDPDLSQRMMFHTADVMEVTTGLGEYEVVFLAALVGVEEEEKGKVLRHLGKHMAPGAYLMLRSAHGARAFLYPVVDVCEVEASGFEVLSVFHPTDEVINSVVIARKLFDLVPTTGGSSSNEDEDDQNDDDDTDDEKQGILNNTPIVLTEKYSGFKAFSPMIEELAMEEQLS 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30811818 30813119 - MC08g2197 Mch8g2775 696396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2775 337 Pfam Nicotianamine synthase protein 3 273 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Mch8g2775 337 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 252 IPR029063 -
Mch8g2775 337 MobiDBLite consensus disorder prediction 287 301 - -
Mch8g2775 337 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Mch8g2775 337 PANTHER NICOTIANAMINE SYNTHASE 3 3 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Mch8g2775 337 MobiDBLite consensus disorder prediction 280 309 - -
Mch8g2775 337 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2775 Mch-Chr8:30811818 Mch8g2776 Mch-Chr8:30820127 3.24E-112 tandem
Mch6g2772 Mch-Chr6:29185304 Mch8g2775 Mch-Chr8:30811818 1.01E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2775 K05953 - csv:101203651 449.129