Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g2775 | ATGGAAGAGCCTCTGTTGCAAAAAGTGTGCGCCCTGTACCGCCAAATCTCGAGCCTTGAGAGCCTGAAGCCGTCCAAAAATGTCGACACTCTTTTCACCCAACTGGTGGTCACGTGCTGCCCCCCTGCCCCTGGCCTCGACATCTCCTCCCTCCCACACTCCCTTCAGTCCATGCGAGCCCACCTCATCCGCCTCTGCGCCAGCGCCGAGGCGCTCTTGGAGGTTCACTTCTCTTCCATCCTCGCCTCCTCCTTCCCCAACCCCATTCACAATCTCTCCATCTTCCCCTACTACTCTAACTACTTGAAGCTCTCTCTTCTCGAGTTCGATATTCTCCGCTCTCATTGCCGCCGTCCCCCCGCTAGCGTCGCGTTTGTTGGCTCCGGCCCCCTCCCGCTCTCCTCCATTGTCCTGGCCTCCGCTCACATGAAAGGGACGATTTTTCATAACTTTGATATTGACCCGATTGCGAACTCGATGGCGGGTCGATTGGTCGGGTCGGACCCAGACCTATCGCAGCGGATGATGTTTCACACGGCCGATGTGATGGAGGTGACAACAGGACTTGGGGAGTACGAGGTGGTGTTTTTGGCGGCGTTAGTGGGAGTGGAGGAGGAGGAGAAGGGGAAGGTTTTGAGGCATTTGGGGAAGCATATGGCGCCCGGGGCTTATTTGATGCTGAGGAGTGCGCATGGCGCTAGGGCTTTTTTGTACCCTGTTGTTGACGTTTGTGAGGTTGAAGCTTCTGGATTCGAGGTTCTGTCTGTGTTTCATCCTACTGATGAAGTTATAAACTCTGTTGTTATTGCTAGAAAGCTGTTTGATCTCGTCCCAACTACTGGAGGAAGCTCCAGTAACGAAGACGAAGATGATCAAAACGACGATGATGATACTGATGACGAGAAGCAGGGTATTTTGAACAATACTCCTATTGTGTTGACTGAGAAGTACTCTGGGTTCAAGGCTTTTAGTCCTATGATTGAAGAACTTGCCATGGAGGAACAACTTTCTTGA | 1014 | 52.56 | MEEPLLQKVCALYRQISSLESLKPSKNVDTLFTQLVVTCCPPAPGLDISSLPHSLQSMRAHLIRLCASAEALLEVHFSSILASSFPNPIHNLSIFPYYSNYLKLSLLEFDILRSHCRRPPASVAFVGSGPLPLSSIVLASAHMKGTIFHNFDIDPIANSMAGRLVGSDPDLSQRMMFHTADVMEVTTGLGEYEVVFLAALVGVEEEEKGKVLRHLGKHMAPGAYLMLRSAHGARAFLYPVVDVCEVEASGFEVLSVFHPTDEVINSVVIARKLFDLVPTTGGSSSNEDEDDQNDDDDTDDEKQGILNNTPIVLTEKYSGFKAFSPMIEELAMEEQLS | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 30811818 | 30813119 | - | MC08g2197 | Mch8g2775 | 696396 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g2775 | 337 | Pfam | Nicotianamine synthase protein | 3 | 273 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Mch8g2775 | 337 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 107 | 252 | IPR029063 | - | |
Mch8g2775 | 337 | MobiDBLite | consensus disorder prediction | 287 | 301 | - | - | |
Mch8g2775 | 337 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 277 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Mch8g2775 | 337 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 3 | 277 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Mch8g2775 | 337 | MobiDBLite | consensus disorder prediction | 280 | 309 | - | - | |
Mch8g2775 | 337 | Gene3D | Vaccinia Virus protein VP39 | 6 | 273 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g2775 | Mch-Chr8:30811818 | Mch8g2776 | Mch-Chr8:30820127 | 3.24E-112 | tandem | |
Mch6g2772 | Mch-Chr6:29185304 | Mch8g2775 | Mch-Chr8:30811818 | 1.01E-114 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g2775 | K05953 | - | csv:101203651 | 449.129 |