Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch8g2776 | ATGTGTTGCCAAGAAGTGCTTTTGGTCCAAAAAGTCTCAGAACTTTACCACAAAATCTCCACTCTCCAAAGCCTCAAACCCTCCAAAGATGTCAACTCCCTCTTCTCCCAACTCGTCCTCACCTGCGCCCCACCGCCACCATCACCGCCACCCATCGACGTCTCGAAGCTCGGCTCCGCCGTCCAAAAAATGAGGTCCCACCTCATCAAGCTCTGCGGCGAGGCCGAGGCCCTCCTTGAGCACCATTACTCCTCCATTTTAGCTTCCCATGAAAACCCTCTTGAAAATCTCTCCATTTTCCCTTACTACTCCAACTACTTGAAACTTGCACACCTTGAATTCTCCATTTTGGAACGCCACGCGCAGCCGTCCAAGGTGGCTTTCGTTGGCTCTGGGGCGCTCCCGTTCACGTCGATCATCATGGCCTCCAAGTACCTCCCGGCCACCGAGTTCCACAACTTCGACGTCGACCCGTCAGCCAACGCGAAGGCTGCGGCCCTGGTGGCCGGGGACCGGGACCTGGAGCGGCGGATGGTGTTCCACACGGCGGACATCATGGAGGTGACCGGCGAGCTGAGGGGGTTCCAAGTGGTATTTTTGGCGGCGTTGGTGGGGATGGAGCGGGAGGAGAAGGTGAAGGTGATCGAGCACTTGGGGAAAAACATGGGCGGCGGCGCGTTGCTGATGCTGAGGAGCGCGTATGGAGCACGCGCCTTCCTTTATCCAGTTGTGGAAGCTCGTGATCTCCAAGGGTTTGAGATTCTTACAGTGTTTCATCCCACGGACGAGGTTATCAATTCTGTTGTGTTGGCTCGATTG | 819 | 56.29 | MCCQEVLLVQKVSELYHKISTLQSLKPSKDVNSLFSQLVLTCAPPPPSPPPIDVSKLGSAVQKMRSHLIKLCGEAEALLEHHYSSILASHENPLENLSIFPYYSNYLKLAHLEFSILERHAQPSKVAFVGSGALPFTSIIMASKYLPATEFHNFDVDPSANAKAAALVAGDRDLERRMVFHTADIMEVTGELRGFQVVFLAALVGMEREEKVKVIEHLGKNMGGGALLMLRSAYGARAFLYPVVEARDLQGFEILTVFHPTDEVINSVVLARL | 273 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 30820127 | 30820945 | - | MC08g2198 | Mch8g2776 | 696397 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch8g2776 | 273 | Gene3D | Vaccinia Virus protein VP39 | 7 | 273 | IPR029063 | - | |
| Mch8g2776 | 273 | Pfam | Nicotianamine synthase protein | 6 | 272 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
| Mch8g2776 | 273 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 5 | 272 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
| Mch8g2776 | 273 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 273 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch6g2772 | Mch-Chr6:29185304 | Mch8g2776 | Mch-Chr8:30820127 | 4.94E-107 | dispersed | |
| Mch8g2775 | Mch-Chr8:30811818 | Mch8g2776 | Mch-Chr8:30820127 | 3.24E-112 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch8g2776 | K05953 | - | csv:101219339 | 418.313 |