Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2798 ATGGGGCATTTCTCCACCATGTTCAATGGGCTGGCAAGGTCATTTTCCTTCAAGAAAGGTAGGAATTCCGGGAATCTAGGTGATGAAGGAGGAAGAGAAGCAGCGAAAGCCATGGCAAAGGATGCAAAAAAGAAAGACTTGATACTACGAACCTCCGGTGTTCTCAATGCAGAAGGTTCAGATAACTTTGCTTCGGTTTTCTCGAAAAAAGGTGAAAAAGGAGTAAACCAAGATTGCTGCATTGTATGGGAGGAATTTGGATGTCAAGAAGACATGATATTCTGTGGGATCTTCGATGGGCATGGACCGTGGGGTCATTTCGTCGCAAAGACGGTAAGAGAATCAATGGCGCCGTCGTTGTTGTGCCATTGGCAGCAGGGACTTGCTCAAGGTTTTCTCGACCCGGAATTGGATTCAGAAAAGAAGCACCAGCGATTTGATATATGGAAGAATTCGTATTTAAGAACTTGTGCTGCTATTGATCACGAACTCGAGCAGCACCGTAAAATTGATACGTTTTACAGCGGAACAACTGCCCTGTCCATTGTTAAACAGGGCGAACTAGTCGTTGTAGCCAATGTAGGTGACTCTCGAGCCGTTTTGGCTACTACATCAGATGATGGAAGGGTAGTTCCGGTTCAGCTCACTGTTGATTTCAAACCGAACCTACCTCAGGAGGCCGAGCGGATAATCCAGTGCAACGGGAGGGTGTTTTGTTTAAGTGACGAACCGGGAGTTCACCGGGTATGGCTTCCCGACGAGGAGTCACCCGGATTGGCAATGTCGAGAGCCTTTGGTGATTATTGTATAAAAGAATTTGGACTCATTTCTGTGCCAGAAGTGACACATAGAAACATAACCAGCAGAGACCAGTTCATTATACTGGCAACTGATGGGGTATGGGATGTTGTCTCCAACCAAGAAGCTGTGGAGATTGTTTCGTCAGCACCGGAAAGAGCGAAATCAGCAAAACGACTGGTCGAGTGTGCGGTTCGGGCATGGAAACGGAAGAGACGGGGCATTGCAATGGATGACATATCAGCTATCTGCCTCTTCTTCCACTCCTCATCAGAGCAAGAAGATGGCCTTGTATCCACGCCATAG 1104 47.19 MGHFSTMFNGLARSFSFKKGRNSGNLGDEGGREAAKAMAKDAKKKDLILRTSGVLNAEGSDNFASVFSKKGEKGVNQDCCIVWEEFGCQEDMIFCGIFDGHGPWGHFVAKTVRESMAPSLLCHWQQGLAQGFLDPELDSEKKHQRFDIWKNSYLRTCAAIDHELEQHRKIDTFYSGTTALSIVKQGELVVVANVGDSRAVLATTSDDGRVVPVQLTVDFKPNLPQEAERIIQCNGRVFCLSDEPGVHRVWLPDEESPGLAMSRAFGDYCIKEFGLISVPEVTHRNITSRDQFIILATDGVWDVVSNQEAVEIVSSAPERAKSAKRLVECAVRAWKRKRRGIAMDDISAICLFFHSSSEQEDGLVSTP 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 30983631 30987410 - MC08g2218 Mch8g2798 696419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2798 367 Gene3D - 54 356 IPR036457 -
Mch8g2798 367 FunFam Probable protein phosphatase 2C 34 54 355 - -
Mch8g2798 367 PANTHER PROTEIN PHOSPHATASE 46 352 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Mch8g2798 367 CDD PP2Cc 62 353 IPR001932 -
Mch8g2798 367 ProSiteProfiles PPM-type phosphatase domain profile. 63 353 IPR001932 -
Mch8g2798 367 SMART PP2C_4 51 351 IPR001932 -
Mch8g2798 367 Pfam Protein phosphatase 2C 87 329 IPR001932 -
Mch8g2798 367 SUPERFAMILY PP2C-like 63 354 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0651 Mch-Chr5:4335453 Mch8g2798 Mch-Chr8:30983631 3.96E-26 dispersed
Mch7g1117 Mch-Chr7:15125580 Mch8g2798 Mch-Chr8:30983631 2.72E-23 dispersed
Mch8g2467 Mch-Chr8:27594408 Mch8g2798 Mch-Chr8:30983631 1.09E-112 dispersed
Mch8g2798 Mch-Chr8:30983631 Mch9g0624 Mch-Chr9:4663637 7.13E-18 dispersed
Mch6g2787 Mch-Chr6:29320844 Mch8g2798 Mch-Chr8:30983631 3.85E-181 wgd
Mch7g1205 Mch-Chr7:15686081 Mch8g2798 Mch-Chr8:30983631 6.11E-154 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2798 - - - 0.0