Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2800 ATGTCGACGGAGAGATTGATCCCCAATGGTACGGCTCCGTCGGAGGCGGCTGAGCCGCCGAGGCTTGTTGCAGCGTCGCATTCGTTCCGGCAGTGTGGGGAGCCGGCTAGGGTTTTTGAGGAGCTTCCGGTTGCTTCTATTGTATCGGTTTCTCGGCCGGATACTGGAGATATTAGTCCCTTGCTGTTATCTTACACCATTCAAATCCAGTACAAACAGTTTAAATGGAACTTAGTGAAGAAAGCATCGCAAGTTATTTATTTACATTTTGCATTGAAGAGACGCACATTTATTGAAGAACTTCACGAGAAACAAGAGCAGGTGAAAGAATGGCTTCAAAACTTAGGAATATTTGACCACACAGCAGTAGTTCATAATGATGATGAGTCTGATGTTGCAGCTGATGAACAAACTACAAGAAACAGGAATGTTCCTTCTGTTGCTGCTTTACCTATCATTAAGCCAGCACTGGGAGGACAGCGGTCCATTTCAGACAAGGCAAAGCTAGCAATGCAGGGTTACTTAAATCACTTTTTAGGGAACTTGGATATTGTAAACTCTCGTGAGGTCTGCAAGTTTTTAGAAGTCTCCAAGATGTCATTTGTAAGAGAATATGGTCCAAAGTTGAAAGAAGGTTACCTAATGGTGAAGCATTTAAAACAACTCACAGGATCTGATTCTAGTATAAAATGTTGTGCATGTCATTGGTGCAGCTGCTGTGATTACAATTGGAAAAAGGTTTGGGCTGTTTTGAAACCAGGTTTCTTTGCCTTGGTTGCTCATCCTCTAGACACTAAACTCCTAGATATAGTTGTTTTTGATGTTCTACCATCATTAGAAGAAAAGGAGGAATCCCAAGCATACTTAGCATCTCATATCAAGGAGCGCAATCCTTTACGTTATTCATTTAAGGTTAGATGCGGAAATGGAAACATGAAGTTCAGAACCACAAGTTCTGCTAAAGTTAGAGAATGGGTATCATCAATCAATGATGCTGGTTTCGGACCTCAAGATGGCTGGTGCCACCCTCATCGCTTTGGTTCTTTTGCTCCTCAGAGAGGTTTGAGTGATGATGAAAGCCAAGCTCAGTGGTTCATAGATGGTGGGGCAGCTTTTGAAGCAATCGCTTGCTCTATTGAGGCTGCAAAATCAGAGATATTCATCACTGGTTGGTGGCTTTGCCCCGAGCTTTATATGCGACGTCCTTTTCAATATCATTATTCTTCACGGCTTGATGCATTACTGGAAACAAAGGCAAAAGAAGGTGTCAAGATTTACATCCTAATGTATAAGGAGGTTCCTATTGCTCTGAAAATTAATAGTATGTATAGTAAGAGGAGACTTCTAAATATTCATGAGAATATTAAGGTACTACGTTCTCCTGATCATATGTCAACTGGAATTTACTATTGGTCGCATCACGAAAAACTTGTCATTGTCGATCACCATATATGCTTCATTGGAGGTTTGGATTTATGCTTTGGCCGCTATGATACAATGGAGCATAAAGTGAGTGATTTCCCTCCTTATACATGGCCAGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCTTGGGAAGACACAATGAAAGATGAATTGGATCGAGAGAAGTATCCTCGAATGCCGTGGCATGATGTTCACTGTGCTCTTTGGGGATCGCCATGCCGTGATATTGCTCGACACTTTGTCCAAAGATGGAACCATGCTAAGAGAAACAAAGCCCCAAATGAAGAAAAAATACCTCTACTAATGCCACAACACCACATGGTCCTTCCACATTACATGGGAAGAAGCACAGAGTTGAGCTTTGAAAATAAAGACTCAGAACAAGATCATCAGAAGCAGACTACTGTAGATTTCTACTCCTCCTTATCTCCACAGCAAGATATTCCATTACTTCTGCCTCAGGAAGCTGGTGGACTTCCAGATTTAAACATTGAAACAAGTAGCCCTTCCATGAATCATCACTTTCTCAATAAGCCCGTGGAGATACAAAGACGTCTTATGGATTCTTTGACACAATATGCAGAAACATATGGATCGTTAGATGAATTTGGATTTTTGGATGAGTTTGGTGATTTGGGTCATCCAAGGGAAGCTGCTATTGATGCTCCAGCATACATGAAAACTTCAGACGACTGGTTGGAAACTGAACCCGAAAGCAATCATGTTGTTGCTGTTAACGATGTGAAAGAAATTGGTCCCATTACTACTAGCAATTGTCAGGTGATAAGAAGTGTCAGTCAGTGGTCAGCAGGAACAAGCAAACCAGAGGCAAGCATCCATGGCGCTTACTGTTTTGCTATTCAAGAGGCAAAACACTTCATCTACATTGAGAACCAGTTTTTCATATCAGGTTTATCAGGGGATGAGACCATACAAAACCGGGTTCTGGAAGCACTGTACCAACGTATATTACTGGCTGATAAAGAACAACAATGTTTTAGAGTCATTGTGGTTTTACCACTCCTGCCTGGATTTCAGGGTGGTGTAGATGATAATGGTGCAGCAACTGTTCGAGCCTTGATGCATTGGCAGTATCGAACAATTAGTTGGGAAAAAACATCAATTTTGTATCGTCTTAATCTTTTACTCGGTCCAAAAACGCAGGATTATATTTTGTTTTGTGGTCTTAGATCATATGGCAGACTTTTCGATGGTGGTCCAATTGCCACAAGTCAGGTATATGTGCACAGCAAATTGATGATAATTGACGATTGTATAACCTTTATTGGTTCCTCCAATATTAATGACAGAAGTTTACTTGGATCCAGGGATTCTGAGATTGGGGTATTTATTGAGGATAAAGAGTTTGTTGATTCATCCATGAATGGAAAGCCTTGGAAGGCTGGAAAGTTTGCACATAGTCTTCGATGCTCCTTGTGGTGTGAGCACCTCGGTCTTCGACTTGAAGAGGTCAGTCAAATCAGTGATCCTATAGCAGAAGCAACATACAAAGATATATGGTTAGCTACAGCAAAGGAAAACACAGCAATATATGAAGATGTCTTTTCTTGCATCCCCAATAACAACATAAACTCAAGATCGTCTCTACGCCAAAGTTTGGCCGATTTGAGGGGAAAACATGGCCATAATACAATAGATTTAGGAATAGCTGCTGAGAAGATAGAAAGCCATGAAAATGGAGAAGTTAAGAAGATAGATCCAATGGAGAGGCTGAAATCTATTAGGGGACATCTGGTTTGTTTCCCATTGGAGTTCATGTGGGAAGAAGATCTCAGACCAGGGTTCATTGAGAGTGAGTTTTATGCTGCTCCTCAAGTTTTTCATTGA 3303 41.17 MSTERLIPNGTAPSEAAEPPRLVAASHSFRQCGEPARVFEELPVASIVSVSRPDTGDISPLLLSYTIQIQYKQFKWNLVKKASQVIYLHFALKRRTFIEELHEKQEQVKEWLQNLGIFDHTAVVHNDDESDVAADEQTTRNRNVPSVAALPIIKPALGGQRSISDKAKLAMQGYLNHFLGNLDIVNSREVCKFLEVSKMSFVREYGPKLKEGYLMVKHLKQLTGSDSSIKCCACHWCSCCDYNWKKVWAVLKPGFFALVAHPLDTKLLDIVVFDVLPSLEEKEESQAYLASHIKERNPLRYSFKVRCGNGNMKFRTTSSAKVREWVSSINDAGFGPQDGWCHPHRFGSFAPQRGLSDDESQAQWFIDGGAAFEAIACSIEAAKSEIFITGWWLCPELYMRRPFQYHYSSRLDALLETKAKEGVKIYILMYKEVPIALKINSMYSKRRLLNIHENIKVLRSPDHMSTGIYYWSHHEKLVIVDHHICFIGGLDLCFGRYDTMEHKVSDFPPYTWPGKDYYNPRESEPNSWEDTMKDELDREKYPRMPWHDVHCALWGSPCRDIARHFVQRWNHAKRNKAPNEEKIPLLMPQHHMVLPHYMGRSTELSFENKDSEQDHQKQTTVDFYSSLSPQQDIPLLLPQEAGGLPDLNIETSSPSMNHHFLNKPVEIQRRLMDSLTQYAETYGSLDEFGFLDEFGDLGHPREAAIDAPAYMKTSDDWLETEPESNHVVAVNDVKEIGPITTSNCQVIRSVSQWSAGTSKPEASIHGAYCFAIQEAKHFIYIENQFFISGLSGDETIQNRVLEALYQRILLADKEQQCFRVIVVLPLLPGFQGGVDDNGAATVRALMHWQYRTISWEKTSILYRLNLLLGPKTQDYILFCGLRSYGRLFDGGPIATSQVYVHSKLMIIDDCITFIGSSNINDRSLLGSRDSEIGVFIEDKEFVDSSMNGKPWKAGKFAHSLRCSLWCEHLGLRLEEVSQISDPIAEATYKDIWLATAKENTAIYEDVFSCIPNNNINSRSSLRQSLADLRGKHGHNTIDLGIAAEKIESHENGEVKKIDPMERLKSIRGHLVCFPLEFMWEEDLRPGFIESEFYAAPQVFH 1100
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31001624 31011188 - MC08g2220 Mch8g2800 696421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2800 1100 Pfam PLD-like domain 898 943 IPR025202 -
Mch8g2800 1100 Coils Coil 94 114 - -
Mch8g2800 1100 PIRSF PLD_euk 46 514 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Mch8g2800 1100 PIRSF PLD_euk 705 1100 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Mch8g2800 1100 PIRSF PLD_euk 508 628 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Mch8g2800 1100 ProSiteProfiles PH domain profile. 207 334 IPR001849 -
Mch8g2800 1100 Pfam Phospholipase D Active site motif 471 496 IPR001736 GO:0003824(InterPro)
Mch8g2800 1100 SMART pld_4 896 923 IPR001736 GO:0003824(InterPro)
Mch8g2800 1100 SMART pld_4 469 496 IPR001736 GO:0003824(InterPro)
Mch8g2800 1100 PANTHER PHOSPHOLIPASE D 188 1078 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Mch8g2800 1100 FunFam Phospholipase 730 950 - -
Mch8g2800 1100 Gene3D Endonuclease Chain A 710 957 - -
Mch8g2800 1100 SMART PH_update 208 336 IPR001849 -
Mch8g2800 1100 SUPERFAMILY Phospholipase D/nuclease 737 944 - -
Mch8g2800 1100 CDD PLDc_vPLD1_2_yPLD_like_2 756 940 - -
Mch8g2800 1100 CDD PH_PLD 185 332 - -
Mch8g2800 1100 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 469 496 IPR001736 GO:0003824(InterPro)
Mch8g2800 1100 SUPERFAMILY PH domain-like 204 333 - -
Mch8g2800 1100 SUPERFAMILY Phospholipase D/nuclease 334 588 - -
Mch8g2800 1100 Gene3D Endonuclease Chain A 355 605 - -
Mch8g2800 1100 CDD PLDc_vPLD1_2_yPLD_like_1 362 506 - -
Mch8g2800 1100 Gene3D - 206 334 IPR011993 -
Mch8g2800 1100 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 896 923 IPR001736 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1128 Mch-Chr8:8063013 Mch8g2800 Mch-Chr8:31001624 3.12E-26 dispersed
Mch8g1250 Mch-Chr8:9021699 Mch8g2800 Mch-Chr8:31001624 6.31E-18 dispersed
Mch8g2800 Mch-Chr8:31001624 Mch9g0416 Mch-Chr9:3077031 2.05E-27 dispersed
Mch7g1204 Mch-Chr7:15672252 Mch8g2800 Mch-Chr8:31001624 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2800 K01115 - csv:101220522 1967.59