Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2856 CCATTAATCGAACTCTCCTTTTTCTCTCTCCATCAGTTACAAATTCACTCTCTTCTTCGCACAGCCATTGCCTCAGTCTCCGCCAATCCCCAAATGCAAGATATCTTCGCTTCAGTTCGCCGATCATTGGTTTTCCGCGCTCCTCTCGACAATGAGGATTCGCATACTCCTCCAGTTGGAGTTGGCGTGGGAGCCCTAGTTGACAAGATCAACTCCGGCATTCGAAAATCCAGAGTCTTCTCCAGGCACTCCCCTTCCTCTGCTCTGCCTCCGATCCCCAAGGAGAACGAGCCGCCGATTCGATGGCGCAAGGGCGAGTTGATTGGCTGCGGCGCCTTTGGCCGTGTGTATATGGGCATGAATCTTGATTCTGGAGAGCTTCTCGCTGTCAAACAGGTTTTGATAGCTGCGAATGGCGCTTCGAAGGAGAAAGCGCAGGCTCACATTAAGGAACTTGAGGAAGAAGTGAAGTTACTCAAGGATCTTTCTCATCCAAACATTGTTAGATATTTGGGCACAGTTAGGGAGGATGATTCTTTAAATATATTATTGGAATTTGTCCCTGGTGGATCGATATCATCACTTTTGGGGAAATTTGAAGCCTTCCCTGAAGCAGTTATAAGAACATATACAAAACAGTTATTATTGGGACTGGAATATTTGCACAAGAACGGTATCATGCACAGGGACATTAAGGGGGCAAATATTCTTGTAGATAACAAGGGATGCATTAAGCTTGCAGATTTTGGTGCATCAAAACAGGTTGCCGAGCTGGCTACAGTTTCTGGTGCGAAGTCCATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTCATTCTGCAGACTGGGCATAGTTTCTCTGCTGATATATGGAGTGTTGGATGCACTGTTATTGAGATGGCTACAGGAAAGCCTCCTTGGAGCGATCAGTATCCAGAGGTTGCTGCTCTTTTTCATATAGGTACAACAAAGTCTCATCCTCCAATCCCTGAGCAACTTTCTATTGAAGCTCAAGATTTTCTGTTGAAATGTTTGCAGAAGGAACCAAACTTAAGACCAGTTGCATCTGAACTGCTGAAGCATCCTTTTGTTACTGGGGAGGAAGCAAAATCTCAACTTGCATCGAATAATGCATGCATGATTTGCCATCATCAGGAGCCTTTGGAAATCCATTCACCTCTATATACTGCAAACCTTGAGATGAGTAAAACTTCAACTCATCTTGGATCAAGTGATATTTGTAACTTGGATAGTCTGAGCTGCTCAAAAGTATACACTGGTAACGAACAAGAAAATGATATTTGGGGAACAAACAACAGTGATGATGAAATGTGTCAGATTGATGACAAGGACGATTTTATGTTAGATGAAGTAAAACTCAGGTCTTCTATTATACCCGAAAATTTGAAGAGTTATAACCCAATTTGTGAGCCCTCCGATGATGAGGATTGCAAATTTGATAAAGGTCCAGTAGTAGACCAAGGAAGCAATTTAGATGAGAAAGCTCTTGCGCCTGGAAGCTGTTCTGGAGTTTTTGATGAGGACCAAAACTTCTCCTTTCCTTGTGGGCGATCACTTTCTGAAGATGAGGATGAGGTTACTGAATCAAAAATTAAAGCTTTCTTGGATGAAAAGGCTTTTGAATTGAAGAAAATGCAGACACCCTTATATGAAGAGTTCTACAATAGTTTGAATACATCCTGCTCTCCCGTTTTTATTGAGAGTAAACCAGATGAAAGTACTCCTAAATACTTGAAATTACCCCCAAAAAGCCGGTCTCCAAGTCGAAGTCCAGGTAACCAATCGACAGTAATGGATGCTTTTGGTACTGGGAGCCCAGGGAGCGGTAGCAGGAGTAATGGAAATGATCAGAGATCACAACTCAATGATTGGAAAGGACTTCTAGCTGATGGTCAGTCAGAAGCTGGTAGCCCAAGGAAGCATTATTCTGAAATACAGAGGAAGTGGAAAGAAGAGCTTGATCAAGAGCTTGAGAGAAAACGAGAGATGATGCGTCAAGCTGGTGGGGGAAGTAAAACTTCATCTCCAAAGGATAAAGCCATTGGTAGGCAGAGAGAGCGGACAAGATTTGCATCTCCATTACGGGATGATGCGTCGGGCACTGGGAAGGAGAACAGGGAAAACATCATCTCCTAA 2157 43.58 PLIELSFFSLHQLQIHSLLRTAIASVSANPQMQDIFASVRRSLVFRAPLDNEDSHTPPVGVGVGALVDKINSGIRKSRVFSRHSPSSALPPIPKENEPPIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAANGASKEKAQAHIKELEEEVKLLKDLSHPNIVRYLGTVREDDSLNILLEFVPGGSISSLLGKFEAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVAELATVSGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSDQYPEVAALFHIGTTKSHPPIPEQLSIEAQDFLLKCLQKEPNLRPVASELLKHPFVTGEEAKSQLASNNACMICHHQEPLEIHSPLYTANLEMSKTSTHLGSSDICNLDSLSCSKVYTGNEQENDIWGTNNSDDEMCQIDDKDDFMLDEVKLRSSIIPENLKSYNPICEPSDDEDCKFDKGPVVDQGSNLDEKALAPGSCSGVFDEDQNFSFPCGRSLSEDEDEVTESKIKAFLDEKAFELKKMQTPLYEEFYNSLNTSCSPVFIESKPDESTPKYLKLPPKSRSPSRSPGNQSTVMDAFGTGSPGSGSRSNGNDQRSQLNDWKGLLADGQSEAGSPRKHYSEIQRKWKEELDQELERKREMMRQAGGGSKTSSPKDKAIGRQRERTRFASPLRDDASGTGKENRENIIS 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31430138 31437123 - MC08g2262 Mch8g2856 696477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2856 718 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 84 368 IPR050538 -
Mch8g2856 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2856 718 MobiDBLite consensus disorder prediction 593 629 - -
Mch8g2856 718 Coils Coil 653 673 - -
Mch8g2856 718 ProSiteProfiles Protein kinase domain profile. 102 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2856 718 FunFam Mitogen-activated protein kinase kinase kinase 2 101 391 - -
Mch8g2856 718 Coils Coil 135 162 - -
Mch8g2856 718 FunFam Serine/threonine-protein kinase STE11 99 192 - -
Mch8g2856 718 MobiDBLite consensus disorder prediction 685 718 - -
Mch8g2856 718 Pfam Protein kinase domain 103 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2856 718 SMART serkin_6 102 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2856 718 MobiDBLite consensus disorder prediction 577 718 - -
Mch8g2856 718 MobiDBLite consensus disorder prediction 647 673 - -
Mch8g2856 718 Gene3D Transferase(Phosphotransferase) domain 1 101 392 - -
Mch8g2856 718 SUPERFAMILY Protein kinase-like (PK-like) 101 365 IPR011009 -
Mch8g2856 718 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524(InterPro)
Mch8g2856 718 CDD STKc_MAPKKK 101 364 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1440 Mch-Chr4:17872410 Mch8g2856 Mch-Chr8:31430138 1.12E-39 dispersed
Mch7g1086 Mch-Chr7:14888068 Mch8g2856 Mch-Chr8:31430138 5.03E-253 dispersed
Mch8g0724 Mch-Chr8:5136400 Mch8g2856 Mch-Chr8:31430138 7.79E-61 dispersed
Mch8g2084 Mch-Chr8:23835410 Mch8g2856 Mch-Chr8:31430138 2.78E-63 dispersed
Mch8g2856 Mch-Chr8:31430138 Mch9g0834 Mch-Chr9:6299304 2.67E-37 dispersed
Mch1g1652 Mch-Chr1:17419400 Mch8g2856 Mch-Chr8:31430138 1.85E-06 transposed
Mch7g0358 Mch-Chr7:5463631 Mch8g2856 Mch-Chr8:31430138 2.15E-07 transposed
Mch5g0670 Mch-Chr5:4518006 Mch8g2856 Mch-Chr8:31430138 1.83E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77637 PF00069 Pkinase 1.60E-70 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2856 K20606 - csv:101209358 1155.97