Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2905 ATGGGTGCTCAGAGAAAGGGAGCGTCGCGGGTTTCCGAGGACCCCGAGGAGCTGGCAAGAGTTTCCCTGCAGGCTGTTCTTCTTGCCGATAGCTTTACCACTAAGTTTCGCCCCATAACTCTCGAACGCCCCAAGGTATTATTGCCGCTGGTAAACGTCCCGATGATTAATTATACTTTATCTTGGCTCGAATCGGCTGGTGTTGAAGAGGTGTTTGTATTTTGCTGTGCTCATTCGAAGCAAGTTATCGATTATTTGGAGAATTCTGAGTGGGTATCCCTACCAGACTTTGCAGTCACAACTATAGAGTCGCACAACTCCGTTAGTGCTGGAGATGCCCTGCGTTTGATCTATGAAAGAAATGTGATACATGGTGATTTTGTACTTATCACTGGAGACACCATAAGCAACATGTCACTTACTCGAGCTCTTCAACAACACAAAGAGAGAAAGAAGAAAGATAGTAATGCTGTTATGACTATGGTTGTCAAACGGTCAAAGCCTTCTCCAATCACACACCAATCTCGGCTTGGCACTGATGAGCTATTTATGGCAATTGATCATAATACCAAGCAACTCTTGTATTATGAGGATAAGGCCGACCATTCAAAAGGAGTTATACATCTTGACAAGTCATTGCTAATGGATAATTCTTCCATATCACTTCATAATGACATGCAGGATTGTTACATAGACATATGTTCCCCAGAAGTACTCAGCCTATTTACTGACAATTTTGACTACCAACATCTACGTCGTCACTTTGTCAAGGGTTTGCTCTTAGATGATATCATGGGCTACAAGATTTACACACACGAAATTTGCTCAAGCTATGCAGCTAGAATTGATAATTATCGAAGCTATGACACAGTAAGCAAGGACATAATACAGAGGTGGACATATCCACTGGTACCAGATGTTAAATTCTTTGGGAATTTTGCTTATAAACTTGAAAGACAGGGCATGTATAGAGCATCAGAAATACTGCAGGCACGTTCTGCACAGGTTGGTCCTTTTACTGTTATTGGAGATAACAGCAAAATTGGTGACAACACCAAAATTACAAATTCAATTATTGGGCAAGGATGTAGTATTGGATCAAATGTTACCATAGAAGGCTCTTACATATGGGACAATGTCACCATTGAAGATGGCTGTAAACTTAGTCATGCTATTGTTTGTGATGGAGTTATTATAAAATCAGGAGCAGAACTGCAACCTGGCGTAGTTTTGTCTTTCAAGGTTGTTATTGGGGATCAGTTTGTTGTTCCATCATATTCAAAGGTATCTTTGTTTCAGCAACCAACCAATCAAGATAGTGATGAGGAGCTGGAATACGCAGATAATAGCAGTGGCATTGTAGAATTTACAGGTACAACGGACAAGTCAAATAGTGAACTGATGTCCAAATCTTTGGAAATGCAAGGCTGGCCTACATCCGAGGTTGGTAATGGAGGTATGGGATATGTTTGGTCAATTTGTGAAGGAAGTGTTGAAGAAGAATGGAGGCATTCAGTTGCACCCATTCCTGCCGATAAACTTGAGAAGGCTATGCAAGCCACAGATGATGAGCTGGAGTTAACTCAAGATGCTAATGTTCTACCACCTTCAGGGGAGTTGAAGTCCGACTCATATGTTTCAGATGGGGATGATAACGAAGACTCTAGAGATGACTCCATCCACTTTGAGAAAGAGGTTGAAGCAACGTTTCTGAGGGCTGTGCATGAAAATATTAAAGTAGACAATGTGATTTTGGAAGTAAATTCATTGCGGTTGTCATACAATAAGGTTGCTGCAGATTGTGCAGGAGCTATATTTTATTCTCTGATGAAATTTGCATTGGATTCTCCTCATAGTTCATCTAGTGAATTACTGCAAAATAGTACAAATGTAATTACAAAATGGAAAAAACTTCTGAAGTACTACCTATCTGACATGGATGAAGAGATTGAAGTGATATTAAAATTTGAAGAGATATGCCTGGAATCTGCCAAGGAATTCACTCCACATTTTACCAAGATTTTGTGTCATTTGTATGACCAAGAAATCGTTCAAGAAGATGCCATTCTGAGGTGGGATGACGAGAAAAAGGAAGCAGATGATTCGGATAAATTTTTCGTTAAGCAGGCCGAGAAATTCATTGAATGGTTAAGAGTAGCATCCGAAGAGGAAGATGAAGAGGAAGAATAG 2190 40.32 MGAQRKGASRVSEDPEELARVSLQAVLLADSFTTKFRPITLERPKVLLPLVNVPMINYTLSWLESAGVEEVFVFCCAHSKQVIDYLENSEWVSLPDFAVTTIESHNSVSAGDALRLIYERNVIHGDFVLITGDTISNMSLTRALQQHKERKKKDSNAVMTMVVKRSKPSPITHQSRLGTDELFMAIDHNTKQLLYYEDKADHSKGVIHLDKSLLMDNSSISLHNDMQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIYTHEICSSYAARIDNYRSYDTVSKDIIQRWTYPLVPDVKFFGNFAYKLERQGMYRASEILQARSAQVGPFTVIGDNSKIGDNTKITNSIIGQGCSIGSNVTIEGSYIWDNVTIEDGCKLSHAIVCDGVIIKSGAELQPGVVLSFKVVIGDQFVVPSYSKVSLFQQPTNQDSDEELEYADNSSGIVEFTGTTDKSNSELMSKSLEMQGWPTSEVGNGGMGYVWSICEGSVEEEWRHSVAPIPADKLEKAMQATDDELELTQDANVLPPSGELKSDSYVSDGDDNEDSRDDSIHFEKEVEATFLRAVHENIKVDNVILEVNSLRLSYNKVAADCAGAIFYSLMKFALDSPHSSSSELLQNSTNVITKWKKLLKYYLSDMDEEIEVILKFEEICLESAKEFTPHFTKILCHLYDQEIVQEDAILRWDDEKKEADDSDKFFVKQAEKFIEWLRVASEEEDEEEE 729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31818704 31830402 + MC08g2301 Mch8g2905 696526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2905 729 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 11 729 IPR051956 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0031369(PANTHER)
Mch8g2905 729 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058(InterPro)
Mch8g2905 729 SUPERFAMILY ARM repeat 562 718 IPR016024 -
Mch8g2905 729 FunFam Translation initiation factor eIF-2B subunit epsilon 12 303 - -
Mch8g2905 729 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
Mch8g2905 729 Gene3D Hexapeptide repeat proteins 312 434 - -
Mch8g2905 729 FunFam Translation initiation factor eIF-2B epsilon subunit 552 728 - -
Mch8g2905 729 MobiDBLite consensus disorder prediction 528 557 - -
Mch8g2905 729 SMART 542_3 636 723 IPR003307 GO:0005515(InterPro)
Mch8g2905 729 FunFam Trimeric LpxA-like enzyme 316 449 - -
Mch8g2905 729 SUPERFAMILY Trimeric LpxA-like enzymes 267 429 IPR011004 -
Mch8g2905 729 CDD W2_eIF2B_epsilon 557 721 IPR044123 GO:0005085(InterPro)|GO:0031369(InterPro)
Mch8g2905 729 Pfam Bacterial transferase hexapeptide (six repeats) 340 373 IPR001451 -
Mch8g2905 729 Gene3D - 549 728 - -
Mch8g2905 729 CDD LbH_eIF2B_epsilon 341 419 - -
Mch8g2905 729 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 11 303 IPR029044 -
Mch8g2905 729 Coils Coil 511 531 - -
Mch8g2905 729 ProSiteProfiles W2 domain profile. 556 727 IPR003307 GO:0005515(InterPro)
Mch8g2905 729 Pfam eIF4-gamma/eIF5/eIF2-epsilon 648 727 IPR003307 GO:0005515(InterPro)
Mch8g2905 729 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2905 K03240 - csv:101217025 1321.99