Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g2907 | ATGGGATGTATAATTAGCCGAGAGGTAGCTTCTAGAAACTCACCAGATTCCGAGGATAAGAAGGAGAAGAGTTCTGAATGTGGTGACGATTTGGAGAGGAAGGAAGCTGGTGTGGCTGACGCTGTTGATGTCACTCAGAAGGAAGGGCATGGCCATGGGGCCCAGACTTTGACAAAAGAGCAGAGAAGAAAGTCGAAACCCAACCCCGGACCGAGAAATTTGCCAAAGCAATCACAGGGGGAGCAGGTGGCGGCTGGATGGCCTTCTTGGCTCACAGCAGTTTGTGGGGAGGCACTCAATGGTTGGGTTCCGAGGAAGGCTGATACATTTGAGAAGATTGATAAGATTGGACAAGGGACATATAGTAATGTGTACAAAGCGAAAGATATATTGACAGGTAAAGTTGTTGCGCTGAAGAAGGTTCGTTTTGACAATTTAGAGCCAGAAAGTGTAAGATTTATGGCTAGAGAGATTCTCATTTTGCGACGCTTAGATCATCCTAATGTTGTAAAGTTAGAGGGTTTGGTTACATCAAGAATGTCATGTAGTTTGTACCTTGTGTTTGAGTACATGGAGCATGATTTAGCTGGACTTGCTGCAAATCCATCCATTAAGTTTACAGAGCCGCAGGTTAAATGTTTCATGCAACAACTGCTATCGGGACTCGAGCACTGTCACAGCCATTGGGTGCTTCATCGCGATATTAAGGGTTCAAATCTTCTTATTGATGGGGGAGGGATGCTTAAGATTGCTGACTTTGGATTAGCTAGTTTCTTTGATCCAAAACATAAGCACCCATTGACTAATCGTGTTGTTACCTTATGGTATCGGTCTCCCGAGCTTCTACTCGGTACAACTCATTATGGCGTAGGTGTCGACCTCTGGAGTGCAGGTTGTATTTTAGCAGAGTTATTAGCTGGGAGGCCCATAATGCCTGGCCGTACAGAGGTTGAACAACTCCATAAGATATTCAAGCTGTGTGGCTCACCTTCAGATGAATATTTAAAGAGGGCAAAGTTGCCAAATGCAGCCTTATTTAGACCCCGAGAACCTTACAGGAAATGCATAAAAGAGACTTTTAAAGATTTCCCACCATCATCATTTCCTCTTATGGAAACACTTCTTGCAATCGATCCCGCTGAGAGAATGACTGCTGCTGATGCGCTGAAGAGCGAGTTTTTCACCACAGAACCTTTTGCTTGTGAACCTTCTAGCCTCCCCAAATATCCACCTAGTAAGGAGATCGATGCTAAACGACGAGATGAAGAGGCACGGAGACAAAGAGCAGCTAGTAAATTGCAGAATGATCGGGTAAAGAAGACACGCACACGTAATCGTGCTGGTAGGGCCATTCCTGTTCAAGGAGCCAACGCAGAACTCCAGTCAAATATCGACAGACGACGTCTAATTACTCACGCCAATGCAAAGAGCAAGAGCGAAAAGTTCCCTCCTCCACATCAGGATGGAGCACTCGGATTCACATTGGGATATTCACGTCACATTGATCCTGCTGTTGTTCCTTCTGATGTCCCATTTAGTTCCACGTCGTTCGGTTATCCAACCGATTTGGACCGAGCCTGGTCCGGTCCATTGGTTGAGTCCTCTGACCTTGGTGCTCAAAGGCAGAAGCATTTGGGAGGTGATGCAAGAGAACAACAATCAACAATTAGCCAATCCTCAATTAAAGGAAAAAAGATGGCATGA | 1704 | 45.48 | MGCIISREVASRNSPDSEDKKEKSSECGDDLERKEAGVADAVDVTQKEGHGHGAQTLTKEQRRKSKPNPGPRNLPKQSQGEQVAAGWPSWLTAVCGEALNGWVPRKADTFEKIDKIGQGTYSNVYKAKDILTGKVVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTEPQVKCFMQQLLSGLEHCHSHWVLHRDIKGSNLLIDGGGMLKIADFGLASFFDPKHKHPLTNRVVTLWYRSPELLLGTTHYGVGVDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPSDEYLKRAKLPNAALFRPREPYRKCIKETFKDFPPSSFPLMETLLAIDPAERMTAADALKSEFFTTEPFACEPSSLPKYPPSKEIDAKRRDEEARRQRAASKLQNDRVKKTRTRNRAGRAIPVQGANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPAVVPSDVPFSSTSFGYPTDLDRAWSGPLVESSDLGAQRQKHLGGDAREQQSTISQSSIKGKKMA | 567 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 31847432 | 31853476 | - | MC08g_new0605 | Mch8g2907 | 696528 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g2907 | 567 | ProSiteProfiles | Protein kinase domain profile. | 110 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch8g2907 | 567 | PANTHER | CELL DIVISION PROTEIN KINASE | 109 | 394 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Mch8g2907 | 567 | MobiDBLite | consensus disorder prediction | 549 | 567 | - | - | |
Mch8g2907 | 567 | FunFam | probable serine/threonine-protein kinase At1g54610 | 193 | 434 | - | - | |
Mch8g2907 | 567 | MobiDBLite | consensus disorder prediction | 1 | 84 | - | - | |
Mch8g2907 | 567 | Gene3D | Phosphorylase Kinase; domain 1 | 97 | 192 | - | - | |
Mch8g2907 | 567 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 230 | 242 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch8g2907 | 567 | MobiDBLite | consensus disorder prediction | 523 | 567 | - | - | |
Mch8g2907 | 567 | Gene3D | Transferase(Phosphotransferase) domain 1 | 193 | 434 | - | - | |
Mch8g2907 | 567 | FunFam | probable serine/threonine-protein kinase At1g54610 | 97 | 192 | - | - | |
Mch8g2907 | 567 | Pfam | Protein kinase domain | 110 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch8g2907 | 567 | SMART | serkin_6 | 110 | 394 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch8g2907 | 567 | MobiDBLite | consensus disorder prediction | 412 | 441 | - | - | |
Mch8g2907 | 567 | MobiDBLite | consensus disorder prediction | 474 | 494 | - | - | |
Mch8g2907 | 567 | MobiDBLite | consensus disorder prediction | 403 | 444 | - | - | |
Mch8g2907 | 567 | ProSitePatterns | Protein kinases ATP-binding region signature. | 116 | 139 | IPR017441 | GO:0005524(InterPro) | |
Mch8g2907 | 567 | SUPERFAMILY | Protein kinase-like (PK-like) | 104 | 399 | IPR011009 | - | |
Mch8g2907 | 567 | MobiDBLite | consensus disorder prediction | 12 | 67 | - | - | |
Mch8g2907 | 567 | CDD | STKc_CDK9_like | 110 | 394 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g0091 | Mch-Chr8:506886 | Mch8g2907 | Mch-Chr8:31847432 | 7.41E-70 | dispersed | |
Mch8g2907 | Mch-Chr8:31847432 | Mch9g2347 | Mch-Chr9:23460276 | 2.71E-69 | dispersed | |
Mch6g1637 | Mch-Chr6:18103025 | Mch8g2907 | Mch-Chr8:31847432 | 1.37E-293 | transposed | |
Mch7g1086 | Mch-Chr7:14888068 | Mch8g2907 | Mch-Chr8:31847432 | 3.07E-25 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77639 | PF00069 | Pkinase | 1.30E-66 | CL0016 | Mch | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mch8g2907 | K08819 | - | csv:101217497 | 1029.24 |