Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2922 ATGGCTATTTCTTCCTACTTTCAAAGGATGGCACTGTTCTTGCCTGTGGATCAACGTGAATCAATCAACAGCTCGAATTTTAGAGGGAAGAAAATGGATGGTCTCTCAGATCTTGAGCCAGATTGCTCTGAATTCGTCGAAATTGATCCCACTGGCAGATATGGCAGATACAATGAAATTCTGGGAAAAGGGGCTTCAAAAACAGTTTACAGAGCATTTGATGAATATGAAGGAATCGAGGTGGCTTGGAATCAAGTGAAGCTCTACGATTTCTTGCAGAGTCCAGAAGATCTAGAAAGACTCTACTGTGAGATTCATCTTTTGAAGACATTGAAGCACAGGAACATCATGAAATTCTACACTTCTTGGGTTGATATTGCCAATAGAAACATCAATTTCGTTACTGAAATGTTCACTTCTGGCACTCTTAGACAGTATAGGCTGAAGCATAAGAGAGTAAATATTAGAGCAGTGAAGCATTGGTGCAGGCAGATATTGAGGGGGCTTCATTATTTGCATAGCCATGAGCCTCCTGTAATCCATAGAGATCTGAAGTGTGACAATATCTTTGTTAATGGCAACCAAGGGGAAGTTAAGATTGGTGATCTTGGACTTGCAGCAATCCTTAGGAAATCCCATGCTGATCATTGTGTGGGGACACCAGAGTTTATGGCTCCAGAAGTGTATGCAGAGGCATATAATGAATTGGTTGATATTTACTCATTCGGCATGTGCATTCTGGAGATGATAACTTTCGAATATCCATACAGCGAATGCACTCACCCGGCTCAGATCTACAAGAAAGTCATATCTGGGAAAAAACCAGATGCCTTGTACAAGGTGAAGGATCTCGAAGTGCGGCAGTTCATCGATAAGTGTTTGGCAACTGTTTCATTTAGGCTCTCAGCAGTGGAGCTTTTGAATGACCCATTTCTTCAAGTCGATAATGGTGAATATGATTTAAGACCTGTCGATTATGGGAGAGGATTGGATGACGTCGGTCCTCTCCTACGACAGCCTTATCTCGAACTTCATAGAAGTGATAGCTCCTTTTGTAACGGATATCCATATGATTATAGCTTTGAAGCTTCAAGTGAATCAGGTTATCATCCTGTTGATAACGAAACCAATGGAATTGAACTTTTTGAGTATTGTGAAGGTGAACATTTTGAAGATGTTGATATTAGCATTAAAGGGAAAATGAGAGAAGGTGGTGGCATCTTCTTAAGACTCAGAATTGCAGATAAAGAAGGGCGTATCAGGAACATATATTTCCCATTTGATGTTGAGACGGATACAGCATTAAGTGTTGCAACAGAAATGGTAGCAGAGCTGGATATTACAGATCAAGATGTGACCAGAATTGCCGATATGATTGATGGAGAGATCGCATCGTTGGTGCCTGGATGGAGGCCGGGTCCAGGAATTGAGGAAACGCCCCGCTTTGCGAATCAAAGCTATTGTCACAATTGTGCTACTTTCAACAATGCTTCGAATGGTCTTTTGTTGAGAGATCCTGGTGGAAAGAACTCAGAGGCAGCTCAATGCTGTGGACATCGATATGCTTCGATGCACGGTCGTTTTGAGGAGATCATGTATCAAGCCGACGAGTCCGAGCATCATGTGGCTGAGGGTGGACCGAAGGTGTTGAACCATTCGGATTGCCTGAATTATCCTGAAATATGGGGACAGCATGAAAGCCGTGAACTTAGTTCAATGAGCTCAAGAAACAGCCATTCGGATGAAGATTACGAGAAAACAGATCGACCAGTTTTGGTCACGGATGCAAAAGAAACGATATTGGAAAGCAAGACTACTTCGAATACGAGAACCTCGACCCAGAACCTAATGGGCTCCCTTTCTTTCTCGGAAAACCCTTCATTATATGGACTTCCAAGTAAGTATGAGGATGATATCCAGCAAGAAATGAGATGGATTAAAGCAAAGTACCAAATAGAATTAAGCAAGCTCAGAGATCAACAGTTAAGGATTTTGTCAAAATCTTCAAGTTATAAAGACAGAAAACAGAAAACAGAAAACGGAACCGTGCAAGGCAACCACAATCAAGTCCTTGACAGTTCTGCTCAAGACACGAACCGAAGTAGTATCGATAGTGATCTTTATATCAATAATAGCTTTCGCAGTTTGGATGCCCAAAGGGCCCGAAACTGCACGGCCGTGGAACCCCCTATTGTGGAGAAGGTAGTCTCTGCTAAAAATGCCTGCACTGGTTCATTGATTCCAAGCTCTCTCCACAGAACAATCTCTCTTCCAGTTGATGCTGTTCATATATAA 2295 42.14 MAISSYFQRMALFLPVDQRESINSSNFRGKKMDGLSDLEPDCSEFVEIDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLHYLHSHEPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHADHCVGTPEFMAPEVYAEAYNELVDIYSFGMCILEMITFEYPYSECTHPAQIYKKVISGKKPDALYKVKDLEVRQFIDKCLATVSFRLSAVELLNDPFLQVDNGEYDLRPVDYGRGLDDVGPLLRQPYLELHRSDSSFCNGYPYDYSFEASSESGYHPVDNETNGIELFEYCEGEHFEDVDISIKGKMREGGGIFLRLRIADKEGRIRNIYFPFDVETDTALSVATEMVAELDITDQDVTRIADMIDGEIASLVPGWRPGPGIEETPRFANQSYCHNCATFNNASNGLLLRDPGGKNSEAAQCCGHRYASMHGRFEEIMYQADESEHHVAEGGPKVLNHSDCLNYPEIWGQHESRELSSMSSRNSHSDEDYEKTDRPVLVTDAKETILESKTTSNTRTSTQNLMGSLSFSENPSLYGLPSKYEDDIQQEMRWIKAKYQIELSKLRDQQLRILSKSSSYKDRKQKTENGTVQGNHNQVLDSSAQDTNRSSIDSDLYINNSFRSLDAQRARNCTAVEPPIVEKVVSAKNACTGSLIPSSLHRTISLPVDAVHI 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 31967533 31971208 - MC08g2311 Mch8g2922 696543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2922 764 MobiDBLite consensus disorder prediction 681 701 - -
Mch8g2922 764 CDD STKc_WNK 53 312 - -
Mch8g2922 764 SUPERFAMILY Protein kinase-like (PK-like) 58 313 IPR011009 -
Mch8g2922 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2922 764 MobiDBLite consensus disorder prediction 668 701 - -
Mch8g2922 764 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 408 463 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
Mch8g2922 764 FunFam probable serine/threonine-protein kinase WNK9 138 317 - -
Mch8g2922 764 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 43 663 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Mch8g2922 764 ProSiteProfiles Protein kinase domain profile. 55 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2922 764 FunFam Probable serine/threonine-protein kinase WNK1 40 136 - -
Mch8g2922 764 FunFam probable serine/threonine-protein kinase WNK9 405 489 - -
Mch8g2922 764 SMART serkin_6 55 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2922 764 Pfam Protein kinase domain 58 312 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2922 764 Gene3D Phosphorylase Kinase; domain 1 40 136 - -
Mch8g2922 764 Gene3D Transferase(Phosphotransferase) domain 1 138 318 - -
Mch8g2922 764 Gene3D - 405 468 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1414 Mch-Chr3:16598092 Mch8g2922 Mch-Chr8:31967533 1.39E-157 dispersed
Mch6g2340 Mch-Chr6:25294586 Mch8g2922 Mch-Chr8:31967533 5.71E-148 dispersed
Mch8g2922 Mch-Chr8:31967533 Mch11g0410 Mch-Chr11:2575785 2.67E-21 dispersed
Mch11g1249 Mch-Chr11:8866974 Mch8g2922 Mch-Chr8:31967533 1.74E-117 transposed
Mch2g0481 Mch-Chr2:3481067 Mch8g2922 Mch-Chr8:31967533 2.93E-110 transposed
Mch2g0793 Mch-Chr2:5468544 Mch8g2922 Mch-Chr8:31967533 4.64E-155 transposed
Mch5g0500 Mch-Chr5:3335719 Mch8g2922 Mch-Chr8:31967533 1.12E-153 transposed
Mch6g1586 Mch-Chr6:16831404 Mch8g2922 Mch-Chr8:31967533 4.58E-250 transposed
Mch7g1064 Mch-Chr7:14680084 Mch8g2922 Mch-Chr8:31967533 1.76E-270 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77640 PF00069 Pkinase 1.40E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2922 K08867 - csv:101219552 1271.53