Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2954 TTATCTCTATTACTCGTCTTGTTAGGGTTCTTCAATCGCCTTCATCTCTCTGATTGCGCTAATACAGATGCGGATCCCCCATTGTTGTTGAGTTGTGGATCTGAGAAAGAAGGAACCGATGAATTCGGCCGAAAATGGGGCCCCGATACCAAATTTGTTGACCCGAAGAAATCCTTAATTGCGCCGGCCGGATTCCAAGATCCGTCGATGACTTCGCAGGTTCCGTACATGGAGGCCAGAGTTTTTACCGCCGCGACCGCTTACAAATTTCCGATCAAACGAGGTAGTCGCTACTGGCTTCGCCTCCATTTTTACCCTTCGACGTACGGAACCCATGATTCTGTAAACTCCTATTTCACCGTCGTTGCGAACGATCTCACCCTGTTGAAGAACTTCAGCGCCTACCTCACGTGTGAGGCCTACACACAAGCCTACATTGTTAGGGAATTTTCACTAGCAGCGTTGGAATCCGAAGTCCTAACCGTGACCTTCACGCCGGATTCTGGATTTGCCTTCGTTAATGGAATTGAGTTGGCTCTAATGCCGGAGATCTTCGGGGAAGCCGCAATGGTTGGGGCACCGGCGCAAACGATTGATGGGAGGAGTTCGAATATGCAGACTATTGCGAGACTGAACGTTGGGGGGAGTTACATTTCCCCAGTGAATGACTCCGGTCTGGGCCGGTCATGGTATGGCGATAATCCTTATGTATATGGTGCTTCCCTAGGTGTTGTGATAAACGCTGATAAACGGTTGGCGATCAAATATGGAGATATGCCAGAGTTTATAGCTCCAATGCAAGTTTACCAGTCACTAAGAGCAATGGGGCCTAACAAGGAAATGAGTTTGAACTTCAATCTGACATGGGTATTCCCTAACATCGATCCAGGCTTCATGTATCTACTGAGGTTGCATTTCTGTGATTTGTATATGAATAAGCAAAATCAGGTGGTGTTTACGATCTACATCAACAATCAAACAGTGGATCCAAATGGGTTAGATGTGATTGGTTGGGCGGGTGGTAAGGGCATTCCATTATACCGGGATTATTTTATATACTCAAAAGATAGCTTGACAATGCAGGAGATTTGGCTGGCATTGCATCCTAGGATGGCGTCGCACCCTGAATATGCGGATGCCATGTTAAATGGAGTTGAGATATTCAAGATGGATGCGTCGAAGAATTTGGCAGGGAGGAATCCTCAGGCCTCGGAATTTAGGAAGAAGGTTGAGGCTCAATCAGAAAGAACTTTTGAAGCAAAGGGCAGTAATGCTCAAGTGATAGGAGGGGCAGCAGGGGGGGCTGCAGCCTTTGTTGTGGTGGCACTTTGCTTTGTAGTGTACCAAAAGAAGAACAGAATGCCAGGGACAGATTCACACACAAATAGCTGGTTACCCATCTACGGGAATTCACATTCGAGTGGGAGCAAATCGACGACATCCGGGAAGAGTACGGCGAGTAATTTGGCACAAGGTTTAGCACGGGTTTTTACGCTTCCAGAGATTTTACATGCTACCAAGAACTTTAGTGAGTCAAATGTGATTGGGGTTGGAGGATTTGGGAAGGTGTATAAGGGAGTGATTGATGGAGGGACAAAAGTCGCAATTAAAAGGTCGAACCCGTCGTCAGAACAAGGAGTTCATGAGTTCCTGACTGAAATCGATTTGCTTTCGAAGCTGAGGCACAAACATTTGGTGTCTTTGATTGGTTTTTGTGATGATGAGAATGAGATGTGTTTGGTTTATGATTATATGGGTCTGGGAACTCTGAGGGAGCATCTTTATAAGACCAACAACAAAACTCGTCTCTCATGGAAGCAAAGGCTGGAGATTTGTATTGGAGCAGCTAGAGGACTTCACTACCTTCACACAGGAGCACAGTACACCATCATTCATAGAGATGTTAAAACTACCAACATTCTCTTGGATGAAAACTGGGTTGCAAAAGTTTCTGATTTCGGGCTCTCGAAAACTGGTCCAAACATGTCTACCGGCCATGTTAGCACAGTAGTTAAGGGTAGCTTTGGCTACTTAGACCCAGAGTACTTCCGGAGGCAACAACTGACCGAGAAATCTGATGTATACTCTTTTGGAGTTGTCCTGTTTGAAGTGTTGTGTGCAAGACCTGCTCTAAATCCAAGCCTGCCCAAGGAACAAGTTAGTCTTGCGGATTGGGCATTGCATTGCAAAAAGAAAGGATTTCTCGAGGATCTCATCGACCCCCACCTCAAGGGGAAAATCACCCCTGAAAGCTTGAAGAAGTTTGCAGATGCAGCTGAGAAATGCCTCGATGACCATGGGGCCGAGCGACCATCTATGGGCGATGTGTTATGGAACCTGGAATTTGCTCTCCAACTGCAAGAAAGTGCCGATGGTGGTGGTTCGAGTCACAGCTCGAGGATGCATGAGGACGATATCCAA 2421 46.51 LSLLLVLLGFFNRLHLSDCANTDADPPLLLSCGSEKEGTDEFGRKWGPDTKFVDPKKSLIAPAGFQDPSMTSQVPYMEARVFTAATAYKFPIKRGSRYWLRLHFYPSTYGTHDSVNSYFTVVANDLTLLKNFSAYLTCEAYTQAYIVREFSLAALESEVLTVTFTPDSGFAFVNGIELALMPEIFGEAAMVGAPAQTIDGRSSNMQTIARLNVGGSYISPVNDSGLGRSWYGDNPYVYGASLGVVINADKRLAIKYGDMPEFIAPMQVYQSLRAMGPNKEMSLNFNLTWVFPNIDPGFMYLLRLHFCDLYMNKQNQVVFTIYINNQTVDPNGLDVIGWAGGKGIPLYRDYFIYSKDSLTMQEIWLALHPRMASHPEYADAMLNGVEIFKMDASKNLAGRNPQASEFRKKVEAQSERTFEAKGSNAQVIGGAAGGAAAFVVVALCFVVYQKKNRMPGTDSHTNSWLPIYGNSHSSGSKSTTSGKSTASNLAQGLARVFTLPEILHATKNFSESNVIGVGGFGKVYKGVIDGGTKVAIKRSNPSSEQGVHEFLTEIDLLSKLRHKHLVSLIGFCDDENEMCLVYDYMGLGTLREHLYKTNNKTRLSWKQRLEICIGAARGLHYLHTGAQYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMSTGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALNPSLPKEQVSLADWALHCKKKGFLEDLIDPHLKGKITPESLKKFADAAEKCLDDHGAERPSMGDVLWNLEFALQLQESADGGGSSHSSRMHEDDIQ 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 32248067 32250487 + MC08g2341 Mch8g2954 696575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2954 807 Gene3D Phosphorylase Kinase; domain 1 470 584 - -
Mch8g2954 807 PANTHER OS07G0166700 PROTEIN 497 788 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Mch8g2954 807 Pfam Protein tyrosine and serine/threonine kinase 512 775 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2954 807 SMART serkin_6 509 783 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2954 807 Gene3D - 203 392 - -
Mch8g2954 807 Gene3D - 28 180 - -
Mch8g2954 807 CDD STKc_IRAK 515 781 - -
Mch8g2954 807 Gene3D Transferase(Phosphotransferase) domain 1 585 798 - -
Mch8g2954 807 FunFam Receptor-like protein kinase FERONIA 585 799 - -
Mch8g2954 807 FunFam receptor-like protein kinase FERONIA 471 584 - -
Mch8g2954 807 SUPERFAMILY Protein kinase-like (PK-like) 488 783 IPR011009 -
Mch8g2954 807 ProSiteProfiles Protein kinase domain profile. 509 783 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g2954 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g2954 807 Pfam Malectin-like domain 30 390 IPR024788 -
Mch8g2954 807 FunFam FERONIA receptor-like kinase 203 391 - -
Mch8g2954 807 FunFam FERONIA receptor-like kinase 27 182 - -
Mch8g2954 807 ProSitePatterns Protein kinases ATP-binding region signature. 515 537 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g0255 Mch-Chr6:1654735 Mch8g2954 Mch-Chr8:32248067 5.18E-177 dispersed
Mch8g2358 Mch-Chr8:26729968 Mch8g2954 Mch-Chr8:32248067 1.63E-204 dispersed
Mch8g2359 Mch-Chr8:26737529 Mch8g2954 Mch-Chr8:32248067 2.23E-171 dispersed
Mch8g2954 Mch-Chr8:32248067 Mch9g1610 Mch-Chr9:18293041 2.06E-92 dispersed
Mch8g2954 Mch-Chr8:32248067 Mch9g0371 Mch-Chr9:2752302 3.35E-193 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77642 PF12819 Malectin_like 3.70E-35 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2954 - - - 0.0