Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2974 ATCATGGCGAACCGGTGGTGGACCTCCGGCCAGATGGGTCTTCCCGGAGTTGATCACACGTCAACCAGCTCCTCCGCCATGAGAAAACCAGATCTAGGGATCTCCATGAACGACAACGGTGGACCGATAAGCAGCGGCGGCGATGATGACGAAGATAGAGACAACGGCGGTGACGAGCCTAAAGAAGGAGCTGTGGAAGTTCCGACCCGCCGTCCCCGTGGCCGTCCACCGGGCTCCAAAAACAAGCCTAAGCCACCCATCTTTGTCACTAGAGATAGCCCTAATGCCCTTAAAAGCCATGTCATGGAGATTTCTAATGGAGCTGACATAGCAGAAAGTGTCGCTCACTTCGCCCGTCGGAGACAGAGAGGTGTTTCGGTACTCAGTGGTAGCGGCACGGTGACGAATGTGACGCTCCGGCAGCCATCTGCACCGGGTGCGGTCTTGACCCTCCACGGCCGGTTCGAGATTCTTTCTTTGACTGGAACTTTCCTCCCTGGACCGGCCCCACCAGGCTCCACCGGACTCACGATCTACTTAGCCGGTGGCCAAGGGCAGGTGGTGGGTGGCAGCGTCGTCGGTCCACTCACCGCTGCCGGGCCGGTGATGGTAATCTCCGCCACGTTTTCTAACGCAACGTACGAACGATTGCCCTTGGAAGAAGAGGAGGAAGGGGGCGGAGGAGCACAAGGGCACGCATCGGCGGGAGGTGGTGCGGGCGACGGTTCACCGCAAGGCATCGGCGGCGGTGGAGTAGCGGATCCTTCGTCGATGCCACCGCTGTACAATTTGCCGCCGAATTTGCTGCCAAACGGCGGCGGGCAGATGAATCAGGAGGCTTATTCCTGGGCTCACGGCGGCCGGCCGTCGTTTTAA 876 59.7 IMANRWWTSGQMGLPGVDHTSTSSSAMRKPDLGISMNDNGGPISSGGDDDEDRDNGGDEPKEGAVEVPTRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAHFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLTLHGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVISATFSNATYERLPLEEEEEGGGGAQGHASAGGGAGDGSPQGIGGGGVADPSSMPPLYNLPPNLLPNGGGQMNQEAYSWAHGGRPSF 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 32422099 32423302 + MC08g2357 Mch8g2974 696595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2974 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 289 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Mch8g2974 291 CDD DUF296 98 181 IPR005175 -
Mch8g2974 291 PIRSF ESCAROLA 12 291 IPR014476 GO:0003680(InterPro)
Mch8g2974 291 ProSiteProfiles PPC domain profile profile. 94 232 IPR005175 -
Mch8g2974 291 MobiDBLite consensus disorder prediction 219 291 - -
Mch8g2974 291 Gene3D - 98 224 - -
Mch8g2974 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 210 IPR005175 -
Mch8g2974 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 95 222 - -
Mch8g2974 291 MobiDBLite consensus disorder prediction 14 30 - -
Mch8g2974 291 MobiDBLite consensus disorder prediction 1 94 - -
Mch8g2974 291 FunFam AT-hook motif nuclear-localized protein 97 224 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2556 Mch-Chr4:26074598 Mch8g2974 Mch-Chr8:32422099 1.10E-65 dispersed
Mch5g0070 Mch-Chr5:482774 Mch8g2974 Mch-Chr8:32422099 2.11E-99 dispersed
Mch7g0794 Mch-Chr7:12564553 Mch8g2974 Mch-Chr8:32422099 1.05E-72 dispersed
Mch8g0280 Mch-Chr8:1926045 Mch8g2974 Mch-Chr8:32422099 1.39E-52 dispersed
Mch8g2974 Mch-Chr8:32422099 Mch9g1539 Mch-Chr9:17699058 7.23E-83 dispersed
Mch8g2974 Mch-Chr8:32422099 Mch8g2977 Mch-Chr8:32444426 8.59E-22 proximal
Mch11g0025 Mch-Chr11:199676 Mch8g2974 Mch-Chr8:32422099 1.22E-73 transposed
Mch7g0992 Mch-Chr7:14151062 Mch8g2974 Mch-Chr8:32422099 5.98E-89 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2974 - - - 0.0