Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g2974 | ATCATGGCGAACCGGTGGTGGACCTCCGGCCAGATGGGTCTTCCCGGAGTTGATCACACGTCAACCAGCTCCTCCGCCATGAGAAAACCAGATCTAGGGATCTCCATGAACGACAACGGTGGACCGATAAGCAGCGGCGGCGATGATGACGAAGATAGAGACAACGGCGGTGACGAGCCTAAAGAAGGAGCTGTGGAAGTTCCGACCCGCCGTCCCCGTGGCCGTCCACCGGGCTCCAAAAACAAGCCTAAGCCACCCATCTTTGTCACTAGAGATAGCCCTAATGCCCTTAAAAGCCATGTCATGGAGATTTCTAATGGAGCTGACATAGCAGAAAGTGTCGCTCACTTCGCCCGTCGGAGACAGAGAGGTGTTTCGGTACTCAGTGGTAGCGGCACGGTGACGAATGTGACGCTCCGGCAGCCATCTGCACCGGGTGCGGTCTTGACCCTCCACGGCCGGTTCGAGATTCTTTCTTTGACTGGAACTTTCCTCCCTGGACCGGCCCCACCAGGCTCCACCGGACTCACGATCTACTTAGCCGGTGGCCAAGGGCAGGTGGTGGGTGGCAGCGTCGTCGGTCCACTCACCGCTGCCGGGCCGGTGATGGTAATCTCCGCCACGTTTTCTAACGCAACGTACGAACGATTGCCCTTGGAAGAAGAGGAGGAAGGGGGCGGAGGAGCACAAGGGCACGCATCGGCGGGAGGTGGTGCGGGCGACGGTTCACCGCAAGGCATCGGCGGCGGTGGAGTAGCGGATCCTTCGTCGATGCCACCGCTGTACAATTTGCCGCCGAATTTGCTGCCAAACGGCGGCGGGCAGATGAATCAGGAGGCTTATTCCTGGGCTCACGGCGGCCGGCCGTCGTTTTAA | 876 | 59.7 | IMANRWWTSGQMGLPGVDHTSTSSSAMRKPDLGISMNDNGGPISSGGDDDEDRDNGGDEPKEGAVEVPTRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGADIAESVAHFARRRQRGVSVLSGSGTVTNVTLRQPSAPGAVLTLHGRFEILSLTGTFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVISATFSNATYERLPLEEEEEGGGGAQGHASAGGGAGDGSPQGIGGGGVADPSSMPPLYNLPPNLLPNGGGQMNQEAYSWAHGGRPSF | 291 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 32422099 | 32423302 | + | MC08g2357 | Mch8g2974 | 696595 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g2974 | 291 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 38 | 289 | IPR014476 | GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Mch8g2974 | 291 | CDD | DUF296 | 98 | 181 | IPR005175 | - | |
Mch8g2974 | 291 | PIRSF | ESCAROLA | 12 | 291 | IPR014476 | GO:0003680(InterPro) | |
Mch8g2974 | 291 | ProSiteProfiles | PPC domain profile profile. | 94 | 232 | IPR005175 | - | |
Mch8g2974 | 291 | MobiDBLite | consensus disorder prediction | 219 | 291 | - | - | |
Mch8g2974 | 291 | Gene3D | - | 98 | 224 | - | - | |
Mch8g2974 | 291 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 99 | 210 | IPR005175 | - | |
Mch8g2974 | 291 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 95 | 222 | - | - | |
Mch8g2974 | 291 | MobiDBLite | consensus disorder prediction | 14 | 30 | - | - | |
Mch8g2974 | 291 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
Mch8g2974 | 291 | FunFam | AT-hook motif nuclear-localized protein | 97 | 224 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch4g2556 | Mch-Chr4:26074598 | Mch8g2974 | Mch-Chr8:32422099 | 1.10E-65 | dispersed | |
Mch5g0070 | Mch-Chr5:482774 | Mch8g2974 | Mch-Chr8:32422099 | 2.11E-99 | dispersed | |
Mch7g0794 | Mch-Chr7:12564553 | Mch8g2974 | Mch-Chr8:32422099 | 1.05E-72 | dispersed | |
Mch8g0280 | Mch-Chr8:1926045 | Mch8g2974 | Mch-Chr8:32422099 | 1.39E-52 | dispersed | |
Mch8g2974 | Mch-Chr8:32422099 | Mch9g1539 | Mch-Chr9:17699058 | 7.23E-83 | dispersed | |
Mch8g2974 | Mch-Chr8:32422099 | Mch8g2977 | Mch-Chr8:32444426 | 8.59E-22 | proximal | |
Mch11g0025 | Mch-Chr11:199676 | Mch8g2974 | Mch-Chr8:32422099 | 1.22E-73 | transposed | |
Mch7g0992 | Mch-Chr7:14151062 | Mch8g2974 | Mch-Chr8:32422099 | 5.98E-89 | wgd |
Pathway information
