Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g2991 ATGGCGGGTAATGGGGTTTTTGCAGAGATTCTTGACGGTGAAGTGTACAAGTACTATTCCGAAGGGGAATGGAGGAAGTCATCGTCCGGGAAAAGCGTCGCCATTATCAACCCTACTACCAGGAAGACTCAGTACAGGGTTCAAGCTTGCAGCCAAGAGGAGGTAAATAAAGTGATGGAAATAGCCAAAACTGCACAGAAATCATGGGCAAAGACTCCATTATGGAAGAGAGCAGAGCTTCTTCACAAGGCAGCTGCAATTTTAAAAGAACACAAAGCCCCCATTGCTGAGTGTTTGGTGAAAGAAATTGCCAAACCAGCGAAAGATGCAGTAACTTTTTGTTGTTCTTCTTCTTCTTGTTCTTGGAATGAAGTGATGATAAAGGTTTTGAATGGTGTGAAGGTTGTGAGGTCTGGGGATCTTGTTTCATATTGTGCTGAGGAAGGTGTGAGGATCTTGGGAGAGGGGAAGTTCTTGGTTTCTGACAGTTTCCCTGGGAATGAGAGGACCAAATATTGCCTTACTTCCAAGATCCCACTTGGTGTGGTTTTAGCCATTCCTCCATTCAACTATCCTGTCAATCTGGCTGTCTCGAAAATCGCCCCGGCTTTGATTGCTGGAAATTCCATCGTCCTCAAGCCTCCGACTCAGGGTGCTGTTTCCGCTCTCCACATGGTGCATTGCTTCCACCTAGCTGGTTTTCCTGAAGGCCTTATCAGTTGCGTCACTGGAAAAGGCTCTGAGATTGGCGATTTCCTCACTATGCATCCTGGTGTGAACTGTATAAGCTTTACCGGTGGAGATACTGGTGTTGCAATTTCGAAGAAGGCAGGCATGATACCTCTTCAGATGGAACTGGGAGGCAAAGACGCTTGCATTGTGCTCGAGGATGCTGATCTTGATTTAGTCGCCGCAAACATCATAAAGGGAGGATTTTCTTACAGTGGCCAAAGGTGCACTGCCATCAAGGTTGTTTTGGTAATGGAGTCCGTAGCAGATGCTTTGGTCGAGAAAGTAAAGGTTCGGGTGGCTAAACTAACGGTTGGTCCCCCTGAAGACGACTCAGACATCACTCCAGTCGTGACCGAGTCGTCAGCGAATTTCATCGAAGGGTTGGTATTAGATGCAAAGGAAAAGGGAGCAACATTTTGCCAAGAGTACAAAAGAGAGGGCAACCTCATATGGCCATTGTTGTTGGACAATGTTAGACCAGATATGAGGATTGCTTGGGAGGAACCTTTTGGACCAGTTTTGCCAGTCATTAGAATCAGTTCCATTGAAGAAGGAATCCACCATTGCAATGCTAGCAACTTTGGACTTCAAGGATGCGTCTTCACAAAAGACATCAACAAAGCCATATTGATAGGCGATGCAATGGAAACCGGAACAGTTCAGATCAACTCCGCACCTGCCCGTGGGCCTGATCATTTTCCATTCCAGGGAATCAAGGACAGTGGAATCGGGTCTCAAGGCATCACCAACAGCATCAACATGATGACCAAAGTGAAGACAACAGTTATCAACTTGCCAACACCTTCCTACACCATGGGAACCAAGTCTGTTAGTAAAAGAGCCCTAGGGCCCAAATTGTGA 1593 46.45 MAGNGVFAEILDGEVYKYYSEGEWRKSSSGKSVAIINPTTRKTQYRVQACSQEEVNKVMEIAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTFCCSSSSCSWNEVMIKVLNGVKVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPEGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAIKVVLVMESVADALVEKVKVRVAKLTVGPPEDDSDITPVVTESSANFIEGLVLDAKEKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRISSIEEGIHHCNASNFGLQGCVFTKDINKAILIGDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPTPSYTMGTKSVSKRALGPKL 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 32549624 32553963 - MC08g2374 Mch8g2991 696612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g2991 530 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 22 301 - -
Mch8g2991 530 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 312 323 IPR016160 GO:0016491(InterPro)
Mch8g2991 530 CDD ALDH_F11_NP-GAPDH 15 508 - -
Mch8g2991 530 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 288 478 - -
Mch8g2991 530 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 284 291 IPR029510 GO:0016491(InterPro)
Mch8g2991 530 Pfam Aldehyde dehydrogenase family 24 504 IPR015590 GO:0016491(InterPro)
Mch8g2991 530 PANTHER ALDEHYDE DEHYDROGENASE 134 516 IPR051020 GO:0008911(PANTHER)
Mch8g2991 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 288 513 IPR016163 GO:0016620(InterPro)
Mch8g2991 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 10 287 IPR016162 GO:0016491(InterPro)
Mch8g2991 530 SUPERFAMILY ALDH-like 15 508 IPR016161 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g1231 Mch-Chr7:15892344 Mch8g2991 Mch-Chr8:32549624 7.10E-45 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g2991 K00131 - csv:101208699 951.814