Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g3060 ATGAGAGGAGCTTCCTCTAAGGAAGAGATCAGAGGCACGGCCATGGACGAAAACTGCGGCTGCTGGAGCGTCCTTAAACGCAGCGTTTCAGATGCCAAATCCTCTGCTTCTTCCAAACACTCCATTCCTCGCGCTACCTTAGTATACGATGCAGCTACCGAAACGCGGTACCTAAACGCCAGCAACCGAGATTTTTGCGCCCCGGCCGAAGCTCGGCTATCCTTCGACGGTGCTCCGCCGCTGCCGTTGGAGGACAGAGGTAAACGGCAGCTTCTAAAATTTTCATTTCAGGAGCTAAGATCAGCGACCGGAAATTTCCGACCGGACAGCATTCTCGGAGAAGGAGGGTTCGGGTTCGTTTTCAAAGGATGGATAGAAGAGAACGGGACGGGGCCGGCCAAACCTGGATCCGGAATCACAGTGGCCGTCAAAAGCTTGAAACCCGATGGTCTACAAGGGCACAGAGAATGGGAGGCTGAGGTTAGCTTTCTTGGACAGCTTCACCATCCCAATCTTGTTAAGCTTATTGGATACTGTATTGAAGATGATCAGAGGCTTCTTGTATATGAATTTATGACGCGTGGTAGTCTTGAAAACCATCTTTTCAGAAAAAAATTGCTGATAGTGTTGACAACTTTTGAAGGGACAATACCTCTTCCATGGTCAAATAGGATTAAAATTGCACTTGCCGCAGCCAAAGGCTTGGCCTTCCTCCACAATGGTCCAGAACCTGTCATTTATAGAGATTTCAAGACATCAAACATATTGCTTGATACGGAGTACAATGCCAAGCTTTCGGATTTTGGTTTGGCAAAGGCTGGGCCTCAGGGAGACAAAACACATGTTTCCACCAGAGTAGTTGGAACATATGGCTATGCTGCACCAGAGTATCTAATGACTGGTCACTTGACATCGAAGAGTGACGTCTATAGCTTTGGGGTCGTGCTACTAGAGATTTTAACGGGGAGGAGATCAATGGACAAGAAACGTCCAAGTGGAGAGCAGAACCTAGTGTCATGGGCCAGGCCATATTTAGATGACAAAAGGAAGCTTTACCATATAATAGACCCTCGCTTGGAGCTCAACTACTCCATGCAAGCGGTTCAAAAAGTTTCTCGTCTAGCTTCTCACTGCATCAGTAGAGATCCAAAATCTCGCCCCACCATGGATGAAGTTGTGAAGGTTCTCGTTCCGCTACAGGACCTTTCTGACCTTGCCATCCTAACATATCATTCTCGCTTGTCGCAACAAGGTCGACGAAAAAAGAAACCGGAAGGACTTCATCAGCTAACATATACTCAACCGAAAAACATTAGAACCTCCCCCATGAATGTCGGAGTCATTCATCGACATTGA 1356 47.42 MRGASSKEEIRGTAMDENCGCWSVLKRSVSDAKSSASSKHSIPRATLVYDAATETRYLNASNRDFCAPAEARLSFDGAPPLPLEDRGKRQLLKFSFQELRSATGNFRPDSILGEGGFGFVFKGWIEENGTGPAKPGSGITVAVKSLKPDGLQGHREWEAEVSFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRKKLLIVLTTFEGTIPLPWSNRIKIALAAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYLMTGHLTSKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLDDKRKLYHIIDPRLELNYSMQAVQKVSRLASHCISRDPKSRPTMDEVVKVLVPLQDLSDLAILTYHSRLSQQGRRKKKPEGLHQLTYTQPKNIRTSPMNVGVIHRH 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 33084525 33091082 + MC08g2425 Mch8g3060 696681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g3060 451 FunFam Serine/threonine-protein kinase BIK1 82 191 - -
Mch8g3060 451 Pfam Protein tyrosine and serine/threonine kinase 110 396 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3060 451 ProSitePatterns Protein kinases ATP-binding region signature. 112 144 IPR017441 GO:0005524(InterPro)
Mch8g3060 451 PANTHER OS01G0588500 PROTEIN-RELATED 88 400 IPR050823 -
Mch8g3060 451 CDD STKc_IRAK 112 399 - -
Mch8g3060 451 ProSiteProfiles Protein kinase domain profile. 106 414 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3060 451 Gene3D Phosphorylase Kinase; domain 1 83 191 - -
Mch8g3060 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3060 451 SUPERFAMILY Protein kinase-like (PK-like) 88 396 IPR011009 -
Mch8g3060 451 Gene3D Transferase(Phosphotransferase) domain 1 192 411 - -
Mch8g3060 451 FunFam Probable serine/threonine-protein kinase PBL8 192 418 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1528 Mch-Chr3:17370653 Mch8g3060 Mch-Chr8:33084525 7.85E-135 dispersed
Mch4g2286 Mch-Chr4:24324494 Mch8g3060 Mch-Chr8:33084525 6.74E-170 dispersed
Mch5g0234 Mch-Chr5:1556662 Mch8g3060 Mch-Chr8:33084525 2.04E-102 dispersed
Mch6g0978 Mch-Chr6:6907427 Mch8g3060 Mch-Chr8:33084525 5.02E-126 dispersed
Mch8g2012 Mch-Chr8:22426530 Mch8g3060 Mch-Chr8:33084525 9.35E-133 dispersed
Mch8g2046 Mch-Chr8:23390728 Mch8g3060 Mch-Chr8:33084525 9.22E-85 dispersed
Mch8g3060 Mch-Chr8:33084525 Mch9g2164 Mch-Chr9:22324118 1.25E-154 dispersed
Mch4g1899 Mch-Chr4:21649553 Mch8g3060 Mch-Chr8:33084525 3.20E-52 transposed
Mch6g0701 Mch-Chr6:4804638 Mch8g3060 Mch-Chr8:33084525 2.39E-240 wgd
Mch6g0625 Mch-Chr6:4229374 Mch8g3060 Mch-Chr8:33084525 5.37E-54 wgd
Mch8g3060 Mch-Chr8:33084525 Mch9g0454 Mch-Chr9:3381235 6.08E-72 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77645 PF07714 PK_Tyr_Ser-Thr 2.00E-48 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g3060 - - - 0.0