Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g3098 ATGGCAGCCATAGCCTGCAGAGATGAATCCGACTACGACAGCAGCTGCTCGTCCATAACAGTCCCGGACTCGAGCCGGAGCTGGATGAGCAACCTGAGCTTCGGGAGCCGGCGGCGCAGCAGCTGCGCGTCAGCGGCGGAGGGTGCGGGGGGGTGGTCCCCGTCTCCGCAGAAGCCCCACAAGGCGAACTCGGCGGCGTGGGAGGCCATGCGGTGGCTCCGGGGAGCGAAGGGGCGCGTGGGGCTGGAGCACTTCCGGCTGCTCCGGCGCGTGGGTAGCGGAGACATAGGGAATGTTTACCTGTGCCAGATAAGGAACCCCATGGTGGGGCTGCCGCAGTGCTTCTACGCCATGAAAGTGGTTGACAGAGAAGCGCTTGCCATACGGAACAAGCTCCGCCGTGCCGACATGGAGAAGCACATTCTCGCCGGCCTTGATCACCCGTTTCTCCCCACTCTTTATGCCGACTTTGAGGCTTCTCATTACTCTTGTTTGGTTATGGAGTTCTGCCCCGGCGGAGATTTGTACGCCGCCCGTCAGCGCCTCCCCGCCAAACGCTTCAACATTTCCTCCGCTAAGTTTTACGCGGCGGAGATAATTTTAGCGCTGGAGTATCTGCACATGATGGGAATTGTTTACAGAGATTTGAAGCCCGAAAACGTGCTGGTCAGAGACGACGGCCACATAATGCTGTCGGATTTCGACCTCTGCCTCAAATGCGACGTCGTTCCCAGGCTCATCCGGAGCAGGACCACCACCGAAACATCCCTCCAACGCCACGTCATCTCCACCTCACCAACCTCCTGCGCCGCCGCCCCAATCCAGCCTGTCCTCTCCTGTTTCTCCGCCGCCCGCCGCAGAAAGCCCACCACCGTCACCACCATCACCGAGCACGCCGACGCCGACGACGACGGCGGAAGCCCTGAAGACTTGGTCGCGGAGCCGATCACCGCCCGGTCGAAATCCTTCGTCGGAACCCACGAGTACCTGGCGCCGGAGGTGATCTCCGGCCAGGGCCACGGCAGCGCCGTCGACTGGTGGACTCTGGGGATTTTCCTGTACGAAATGCTGTACGGAAAAACCCCATTCAAAGGGGAAAACAACGAGAAAACGCTAATCAACATTCTGAAGCAGCCATTGGCGTTTCCGAGAATTGGGTTCAGCAGCAGCAAAGAGTATGAAGAAATGGCCAAAGTTGAGGATCTAATCGCCAAGCTTTTGGTGAAGAATCCCAAAAAGAGAATCGGAAGCATAAAGGGGTCGGTTGAAATCAAGAGACACGAATTTTTCAAAGGCCTTAATTTTGCTCTAATCAGATCCGTAAGGCCACCCCAAATCCCCAATTCTGATTTCCACCACGCAAAATACCCTTCTAATTACTTCCCAAAATTGACCAAAAAACAAAGGGACCAACCCTACCAAATCCCCCCTCATCACCATTTTGATTATTTCTAA 1455 56.49 MAAIACRDESDYDSSCSSITVPDSSRSWMSNLSFGSRRRSSCASAAEGAGGWSPSPQKPHKANSAAWEAMRWLRGAKGRVGLEHFRLLRRVGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRNKLRRADMEKHILAGLDHPFLPTLYADFEASHYSCLVMEFCPGGDLYAARQRLPAKRFNISSAKFYAAEIILALEYLHMMGIVYRDLKPENVLVRDDGHIMLSDFDLCLKCDVVPRLIRSRTTTETSLQRHVISTSPTSCAAAPIQPVLSCFSAARRRKPTTVTTITEHADADDDGGSPEDLVAEPITARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGIFLYEMLYGKTPFKGENNEKTLINILKQPLAFPRIGFSSSKEYEEMAKVEDLIAKLLVKNPKKRIGSIKGSVEIKRHEFFKGLNFALIRSVRPPQIPNSDFHHAKYPSNYFPKLTKKQRDQPYQIPPHHHFDYF 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 33399904 33402424 + MC08g2460 Mch8g3098 696719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g3098 484 Gene3D Phosphorylase Kinase; domain 1 83 169 - -
Mch8g3098 484 PANTHER FLIPPASE KINASE 1-RELATED 36 463 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Mch8g3098 484 ProSiteProfiles Protein kinase domain profile. 85 430 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3098 484 SUPERFAMILY Protein kinase-like (PK-like) 59 468 IPR011009 -
Mch8g3098 484 FunFam protein kinase PINOID 170 238 - -
Mch8g3098 484 Gene3D Transferase(Phosphotransferase) domain 1 170 239 - -
Mch8g3098 484 SMART serkin_6 85 430 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3098 484 Pfam Protein kinase domain 320 430 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3098 484 Pfam Protein kinase domain 86 240 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3098 484 Gene3D Transferase(Phosphotransferase) domain 1 318 448 - -
Mch8g3098 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3098 484 FunFam serine/threonine-protein kinase D6PK-like 318 448 - -
Mch8g3098 484 FunFam protein kinase PINOID 2 83 169 - -
Mch8g3098 484 CDD STKc_phototropin_like 84 447 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g1003 Mch-Chr10:7175560 Mch8g3098 Mch-Chr8:33399904 1.41E-110 dispersed
Mch3g0955 Mch-Chr3:13419054 Mch8g3098 Mch-Chr8:33399904 1.93E-130 dispersed
Mch8g1468 Mch-Chr8:10997803 Mch8g3098 Mch-Chr8:33399904 4.63E-129 dispersed
Mch8g3098 Mch-Chr8:33399904 Mch9g1070 Mch-Chr9:9970923 8.25E-60 dispersed
Mch8g3098 Mch-Chr8:33399904 Mch3g0725 Mch-Chr3:11538666 3.02E-132 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77646 PF00069 Pkinase 2.90E-30 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g3098 K08286 - csv:101202905 751.125