Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g3134 | ATGAAGAGGGAGACCCATTTCGACTTCCGTCTTCTGCTCCGCATTGTCTTCTTCCTCGGCACTTTTCTGTGCCTCTCTTCAGCTTCTGAAGAGCTTCAAATTTCCAGCCATGGCGGCGCCCTCACTGACGCAGAAGCCCACTTCATCCGCCAGCGCCAGCTCCTCTATTACAGAGACGAATTCGGCGACCGCGGCGAGGAGGTCACCGTCGATCCTTCCCTCGTCTTCGAGAACGACAGAATCAGAAATGCTTATATAGCATTACAGGCTTGGAAGAAAGCGATTCTCTCTGACCCTTTCAATCTCACTCTAAATTGGGTTGGATCTGATGTCTGTAGCTACAAAGGGGTTTTCTGCGCTCCGGCGCCGGATAACTCCTCGATCCGTACCGTCGCCGGAATCGACCTCAACCATGGCGACATTGCCGGTTACTTGCCGGAGGAGCTCGGTCTTCTTGTAGATCTTGCATTGTTCCATATAAACTCCAATCGGTTCTGCGGCACTGTTCCTCACAAGTTTAAGAACTTGAAGCTCCTCTTCGAGTTGGATCTGAGCAACAATCGGTTCGCCGGGAAGTTTCCCCGGGTGGTTCTTGATCTTCCGGCGCTGAAGTTTTTGGATCTGAGGTTCAATGAGTTCGAGGGAACTGTCCCTAAGGAGCTGTTCGACAAGGATTTGGACGCCATTTTCATCAACCACAACAGATTCCGGTTTGACTTGCCGGGTAATTTCGGGAACTCGCCGGTTTCCGTCATAGTTCTGGCGAACAACAAATTCCACGGCTGTGTTCCGGGGAGCATTGGGAATATGACGAGGTTGAACGAGATTATTCTGATGAATAATGGGTTCCGGTCGTGTTTGCCGTCGGAGATTGGGTTTCTGAAGAATCTGACGGTGTTTGATGTGAGCTTCAACGAGTTCCTCGGCCCTCTGCCGGAGACGATCGGCGGAATGGTGAGCTTGGAGCAGCTGAATGTGGCGCATAATTTCTTGTCCGGGAAGATTCCAGAGAGTATCTGTAAATTGCCGAATCTTCAGAACTTTACTTACTCGTATAACTTCTTCACCGGAGAGCCGCCGTCGTGCCTGGCGTTGCCGGACTTCAATGACCGGAGGAACTGCTTTCCGGAGAGGCCGGTTCAAAGGTCGGAGAAACAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGCAGTTCTTTTGGATGTCCTAGTTTTGCTGCTCCGTCCCCACCTGTGGTGGTGCCCTCTCCGCCGCCTGTTGTTGTTCCGTCGCCGTCGCCGCCGCCACCTGTTTACTCTCCTCCCCCACCTATTTCCTCTTCACACCCCGTTTACCGACCCCGCCCTCCGCCGCCACCTGCACCATCTCCCCCTCCACCACCAGTTTACTCTCCGCCGCCGCCTCCTCCATCTCCACCACCGCCTTCTCCGCCGCCCCCT | 1440 | 53.61 | MKRETHFDFRLLLRIVFFLGTFLCLSSASEELQISSHGGALTDAEAHFIRQRQLLYYRDEFGDRGEEVTVDPSLVFENDRIRNAYIALQAWKKAILSDPFNLTLNWVGSDVCSYKGVFCAPAPDNSSIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFKNLKLLFELDLSNNRFAGKFPRVVLDLPALKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFDLPGNFGNSPVSVIVLANNKFHGCVPGSIGNMTRLNEIILMNNGFRSCLPSEIGFLKNLTVFDVSFNEFLGPLPETIGGMVSLEQLNVAHNFLSGKIPESICKLPNLQNFTYSYNFFTGEPPSCLALPDFNDRRNCFPERPVQRSEKQCKSFLSKPVDCSSFGCPSFAAPSPPVVVPSPPPVVVPSPSPPPPVYSPPPPISSSHPVYRPRPPPPPAPSPPPPPVYSPPPPPPSPPPPSPPPP | 480 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 33665246 | 33666685 | - | MC08g2485 | Mch8g3134 | 696755 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g3134 | 480 | Gene3D | Ribonuclease Inhibitor | 247 | 394 | IPR032675 | - | |
Mch8g3134 | 480 | FunFam | Leucine-rich repeat extensin-like protein 1 | 85 | 246 | - | - | |
Mch8g3134 | 480 | Pfam | Leucine Rich Repeat | 320 | 342 | IPR001611 | GO:0005515(InterPro) | |
Mch8g3134 | 480 | Pfam | Leucine Rich Repeat | 296 | 318 | IPR001611 | GO:0005515(InterPro) | |
Mch8g3134 | 480 | PRINTS | Proline rich extensin signature | 440 | 457 | - | - | |
Mch8g3134 | 480 | PRINTS | Proline rich extensin signature | 461 | 480 | - | - | |
Mch8g3134 | 480 | PRINTS | Proline rich extensin signature | 423 | 439 | - | - | |
Mch8g3134 | 480 | PRINTS | Proline rich extensin signature | 399 | 420 | - | - | |
Mch8g3134 | 480 | FunFam | Leucine-rich repeat extensin-like protein 5 | 247 | 386 | - | - | |
Mch8g3134 | 480 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 22 | 477 | IPR051582 | - | |
Mch8g3134 | 480 | Pfam | Leucine rich repeat | 157 | 212 | IPR001611 | GO:0005515(InterPro) | |
Mch8g3134 | 480 | Pfam | Leucine rich repeat N-terminal domain | 87 | 119 | IPR013210 | - | |
Mch8g3134 | 480 | MobiDBLite | consensus disorder prediction | 416 | 480 | - | - | |
Mch8g3134 | 480 | SUPERFAMILY | L domain-like | 86 | 366 | - | - | |
Mch8g3134 | 480 | Gene3D | Ribonuclease Inhibitor | 85 | 246 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch5g0563 | Mch-Chr5:3807556 | Mch8g3134 | Mch-Chr8:33665246 | 2.57E-40 | dispersed | |
Mch6g0871 | Mch-Chr6:6054851 | Mch8g3134 | Mch-Chr8:33665246 | 2.61E-20 | dispersed | |
Mch7g0650 | Mch-Chr7:11166773 | Mch8g3134 | Mch-Chr8:33665246 | 1.40E-44 | dispersed | |
Mch6g0789 | Mch-Chr6:5485973 | Mch8g3134 | Mch-Chr8:33665246 | 3.35E-86 | wgd |
Pathway information
