Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g3134 ATGAAGAGGGAGACCCATTTCGACTTCCGTCTTCTGCTCCGCATTGTCTTCTTCCTCGGCACTTTTCTGTGCCTCTCTTCAGCTTCTGAAGAGCTTCAAATTTCCAGCCATGGCGGCGCCCTCACTGACGCAGAAGCCCACTTCATCCGCCAGCGCCAGCTCCTCTATTACAGAGACGAATTCGGCGACCGCGGCGAGGAGGTCACCGTCGATCCTTCCCTCGTCTTCGAGAACGACAGAATCAGAAATGCTTATATAGCATTACAGGCTTGGAAGAAAGCGATTCTCTCTGACCCTTTCAATCTCACTCTAAATTGGGTTGGATCTGATGTCTGTAGCTACAAAGGGGTTTTCTGCGCTCCGGCGCCGGATAACTCCTCGATCCGTACCGTCGCCGGAATCGACCTCAACCATGGCGACATTGCCGGTTACTTGCCGGAGGAGCTCGGTCTTCTTGTAGATCTTGCATTGTTCCATATAAACTCCAATCGGTTCTGCGGCACTGTTCCTCACAAGTTTAAGAACTTGAAGCTCCTCTTCGAGTTGGATCTGAGCAACAATCGGTTCGCCGGGAAGTTTCCCCGGGTGGTTCTTGATCTTCCGGCGCTGAAGTTTTTGGATCTGAGGTTCAATGAGTTCGAGGGAACTGTCCCTAAGGAGCTGTTCGACAAGGATTTGGACGCCATTTTCATCAACCACAACAGATTCCGGTTTGACTTGCCGGGTAATTTCGGGAACTCGCCGGTTTCCGTCATAGTTCTGGCGAACAACAAATTCCACGGCTGTGTTCCGGGGAGCATTGGGAATATGACGAGGTTGAACGAGATTATTCTGATGAATAATGGGTTCCGGTCGTGTTTGCCGTCGGAGATTGGGTTTCTGAAGAATCTGACGGTGTTTGATGTGAGCTTCAACGAGTTCCTCGGCCCTCTGCCGGAGACGATCGGCGGAATGGTGAGCTTGGAGCAGCTGAATGTGGCGCATAATTTCTTGTCCGGGAAGATTCCAGAGAGTATCTGTAAATTGCCGAATCTTCAGAACTTTACTTACTCGTATAACTTCTTCACCGGAGAGCCGCCGTCGTGCCTGGCGTTGCCGGACTTCAATGACCGGAGGAACTGCTTTCCGGAGAGGCCGGTTCAAAGGTCGGAGAAACAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGCAGTTCTTTTGGATGTCCTAGTTTTGCTGCTCCGTCCCCACCTGTGGTGGTGCCCTCTCCGCCGCCTGTTGTTGTTCCGTCGCCGTCGCCGCCGCCACCTGTTTACTCTCCTCCCCCACCTATTTCCTCTTCACACCCCGTTTACCGACCCCGCCCTCCGCCGCCACCTGCACCATCTCCCCCTCCACCACCAGTTTACTCTCCGCCGCCGCCTCCTCCATCTCCACCACCGCCTTCTCCGCCGCCCCCT 1440 53.61 MKRETHFDFRLLLRIVFFLGTFLCLSSASEELQISSHGGALTDAEAHFIRQRQLLYYRDEFGDRGEEVTVDPSLVFENDRIRNAYIALQAWKKAILSDPFNLTLNWVGSDVCSYKGVFCAPAPDNSSIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFKNLKLLFELDLSNNRFAGKFPRVVLDLPALKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFDLPGNFGNSPVSVIVLANNKFHGCVPGSIGNMTRLNEIILMNNGFRSCLPSEIGFLKNLTVFDVSFNEFLGPLPETIGGMVSLEQLNVAHNFLSGKIPESICKLPNLQNFTYSYNFFTGEPPSCLALPDFNDRRNCFPERPVQRSEKQCKSFLSKPVDCSSFGCPSFAAPSPPVVVPSPPPVVVPSPSPPPPVYSPPPPISSSHPVYRPRPPPPPAPSPPPPPVYSPPPPPPSPPPPSPPPP 480
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 33665246 33666685 - MC08g2485 Mch8g3134 696755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g3134 480 Gene3D Ribonuclease Inhibitor 247 394 IPR032675 -
Mch8g3134 480 FunFam Leucine-rich repeat extensin-like protein 1 85 246 - -
Mch8g3134 480 Pfam Leucine Rich Repeat 320 342 IPR001611 GO:0005515(InterPro)
Mch8g3134 480 Pfam Leucine Rich Repeat 296 318 IPR001611 GO:0005515(InterPro)
Mch8g3134 480 PRINTS Proline rich extensin signature 440 457 - -
Mch8g3134 480 PRINTS Proline rich extensin signature 461 480 - -
Mch8g3134 480 PRINTS Proline rich extensin signature 423 439 - -
Mch8g3134 480 PRINTS Proline rich extensin signature 399 420 - -
Mch8g3134 480 FunFam Leucine-rich repeat extensin-like protein 5 247 386 - -
Mch8g3134 480 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 22 477 IPR051582 -
Mch8g3134 480 Pfam Leucine rich repeat 157 212 IPR001611 GO:0005515(InterPro)
Mch8g3134 480 Pfam Leucine rich repeat N-terminal domain 87 119 IPR013210 -
Mch8g3134 480 MobiDBLite consensus disorder prediction 416 480 - -
Mch8g3134 480 SUPERFAMILY L domain-like 86 366 - -
Mch8g3134 480 Gene3D Ribonuclease Inhibitor 85 246 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch5g0563 Mch-Chr5:3807556 Mch8g3134 Mch-Chr8:33665246 2.57E-40 dispersed
Mch6g0871 Mch-Chr6:6054851 Mch8g3134 Mch-Chr8:33665246 2.61E-20 dispersed
Mch7g0650 Mch-Chr7:11166773 Mch8g3134 Mch-Chr8:33665246 1.40E-44 dispersed
Mch6g0789 Mch-Chr6:5485973 Mch8g3134 Mch-Chr8:33665246 3.35E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g3134 - - - 0.0