Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g3147 ATGTCAACCCCTAGTCCGGCGCCGACGTCTCCGCCGGCGACCAACACGACATCTCCACCGCCGGCCACCCCAAGTGCTCCACCACCGTCAACTCCGTCGCAGCCGCCGCCTTCCTCTACACCACCACCAACAACCACTCCGTCGCAGCCTCCGCCTTCCGCTGCAACACCGCCCGCCCCTTCTCGACCTCCGCCCACCTCCGCCCCACCTCCGGCGACCCCGTCGCCGCCGCCGCCGTCAACTCCCCAGCCCACCCCGCCCACTGCCTCTCCCTCGCCGCCGACCTCCACACCTCCGCCGTCTAGGCCATCTACTCCCTCGACTTCTCCGCCTCCTCCGTCTCCTCCGGCGGGCCGCACTCCTTCCCCTCCGACTTCTCGTACGCCGTCCACTCCGTCAAGAAGTCCTCCGCCTCCGGCAACGTCGTCGTCCTCCTCGTCATCCGGTATTTCAACTGGACTTGTCGTCGGAATCGCAATTGGCGGAGTGGTAATTGTTCTTCTATTTAGTATATTATGTGTTTGCTGCCAAAAGAAGCGGAGGAGACGACACGATGAAGATGGATTTTATCCGCATCCTCCGCCACCTGGACCAAAAGTTGACCATTACGGTGCTCCGCCGCAGCAATGGCAGCACAATACTCCTCCACCGCCCGGTCCTCTTATCGGGATGATGCCCAAGCCACCTCCGCCGCCCCCAGTTGGACCCCGTCCCCCACACTCTCCCCCTGGCATTCGCCCTCCACCTCCACCGCCTCAGCACTACATGAGTAGCAGTGGAGGTTCAGGCTCTATGTATTCCGGGTCTGAGAATCCGCTCCCTCCGCCGCCTCCGCCTCAACCTGCCATGGCTTTTGGTTTCTCAAAGAGTACTTTTACATACGAGGAGTTGGCAATGGCGACCGATGGATTCTCGGATGCAAATCTCCTCGGGCAAGGTGGATTCGGATACGTGCATAGAGGGGTTCTTCCTAATGGAAAGGAAGTTGCGGTCAAGCAGTTGAAAGCTGGGAGCGGGCAGGGCGAACGGGAATTTCAGGCTGAAGTCGAGATTATTAGCCGAGTTCATCATAAACATCTTGTTTCTTTGGTTGGATATTGTATAACTGGTTCCCAAAGATTGCTTGTTTATGAATTTGTTCCAAACAACACTTTGGAGTTCCATTTACATGGGAAAGGGCGACCGACCATGGATTGGCACACAAGACTTAAATTGGCTCTAGGATCTGCAAAAGGACTGGCTTATCTTCATGAGGATTGTCACCCGAAAATCATTCATCGCGACATTAAAGCAGCCAACATATTGTTGGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGTCTCGCAAAGTTTTCTTCCGATGTCAATACCCATGTATCGACTCGAGTGATGGGTACTTTTGGGTATCTTGCACCAGAGTATGCCTCAAGTGGTAAACTTACTGAGAAATCAGATGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACGGGTCGTCGACCAGTTGATACGAGTAACACTTTCATGGAAGATAGTCTCGTAGACTGGGCTAGGCCATTACTGAACCGAGCTTTAGAAGATGGAAACTTCGATACTTTGGTCGATCCAAGGATGCAAAACAACTACAACCACAATGAGATGGCTCGTATGGTTGCCTGCGCTGCTGCCTGTGTGCGACATTCTGCAAGGCGCCGACCCCGAATGAGCCAGGTAGTACGAGCGCTTGAAGGAGACGCATCACTATCAGATCTCAACGAAGGAGTCAGACCAGGGCAGAGCATGGTATACAGTTCTCATGGAAGCTCAGACTACGACACGAACCAGTACAACGAGGACTTGAGGAAGTTCAGGAAGATGGCACTGGGGAGCACGGAGTATGGAGCAAGCAGCGAGTACAGCGGACCGACGAGCGAGTACGGGCTATACCCTTCGGGGTCGAGCAGCGAAGGGCAAACCACCAGAGAAATGGAGATGAGGACAGTGAAGAAAGAGAGTGGAGGGTTTAGTGGAAGCTCTTGA 2025 54.32 MSTPSPAPTSPPATNTTSPPPATPSAPPPSTPSQPPPSSTPPPTTTPSQPPPSAATPPAPSRPPPTSAPPPATPSPPPPSTPQPTPPTASPSPPTSTPPPSRPSTPSTSPPPPSPPAGRTPSPPTSRTPSTPSRSPPPPATSSSSSSSGISTGLVVGIAIGGVVIVLLFSILCVCCQKKRRRRHDEDGFYPHPPPPGPKVDHYGAPPQQWQHNTPPPPGPLIGMMPKPPPPPPVGPRPPHSPPGIRPPPPPPQHYMSSSGGSGSMYSGSENPLPPPPPPQPAMAFGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWHTRLKLALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTSNTFMEDSLVDWARPLLNRALEDGNFDTLVDPRMQNNYNHNEMARMVACAAACVRHSARRRPRMSQVVRALEGDASLSDLNEGVRPGQSMVYSSHGSSDYDTNQYNEDLRKFRKMALGSTEYGASSEYSGPTSEYGLYPSGSSSEGQTTREMEMRTVKKESGGFSGSS 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 33763076 33767026 + MC08g2495 Mch8g3147 696768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g3147 674 Gene3D Phosphorylase Kinase; domain 1 280 379 - -
Mch8g3147 674 MobiDBLite consensus disorder prediction 181 284 - -
Mch8g3147 674 FunFam proline-rich receptor-like protein kinase PERK1 282 379 - -
Mch8g3147 674 MobiDBLite consensus disorder prediction 627 674 - -
Mch8g3147 674 MobiDBLite consensus disorder prediction 593 609 - -
Mch8g3147 674 MobiDBLite consensus disorder prediction 1 149 - -
Mch8g3147 674 SUPERFAMILY Protein kinase-like (PK-like) 277 577 IPR011009 -
Mch8g3147 674 Gene3D Transferase(Phosphotransferase) domain 1 380 589 - -
Mch8g3147 674 Pfam Protein tyrosine and serine/threonine kinase 309 577 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3147 674 MobiDBLite consensus disorder prediction 1 139 - -
Mch8g3147 674 SMART serkin_6 304 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3147 674 FunFam Proline-rich receptor-like protein kinase PERK1 380 588 - -
Mch8g3147 674 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524(InterPro)
Mch8g3147 674 PRINTS Proline rich extensin signature 43 68 - -
Mch8g3147 674 PRINTS Proline rich extensin signature 4 20 - -
Mch8g3147 674 PRINTS Proline rich extensin signature 24 41 - -
Mch8g3147 674 ProSiteProfiles Protein kinase domain profile. 304 583 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3147 674 MobiDBLite consensus disorder prediction 584 609 - -
Mch8g3147 674 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 121 621 IPR047117 -
Mch8g3147 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3147 674 MobiDBLite consensus disorder prediction 210 255 - -
Mch8g3147 674 MobiDBLite consensus disorder prediction 628 656 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g2421 Mch-Chr4:25193825 Mch8g3147 Mch-Chr8:33763076 1.08E-150 dispersed
Mch4g2458 Mch-Chr4:25472963 Mch8g3147 Mch-Chr8:33763076 1.16E-51 dispersed
Mch5g2026 Mch-Chr5:19850283 Mch8g3147 Mch-Chr8:33763076 8.19E-78 dispersed
Mch6g0903 Mch-Chr6:6343844 Mch8g3147 Mch-Chr8:33763076 3.53E-98 dispersed
Mch8g0461 Mch-Chr8:3274081 Mch8g3147 Mch-Chr8:33763076 4.29E-78 dispersed
Mch8g1248 Mch-Chr8:9005223 Mch8g3147 Mch-Chr8:33763076 6.93E-97 dispersed
Mch8g2889 Mch-Chr8:31630158 Mch8g3147 Mch-Chr8:33763076 3.36E-70 dispersed
Mch8g3147 Mch-Chr8:33763076 Mch9g2244 Mch-Chr9:22849797 5.71E-155 dispersed
Mch10g0737 Mch-Chr10:5096432 Mch8g3147 Mch-Chr8:33763076 3.81E-184 transposed
Mch1g1129 Mch-Chr1:13840687 Mch8g3147 Mch-Chr8:33763076 2.31E-70 transposed
Mch2g1121 Mch-Chr2:7619496 Mch8g3147 Mch-Chr8:33763076 3.60E-163 transposed
Mch8g1214 Mch-Chr8:8673383 Mch8g3147 Mch-Chr8:33763076 2.23E-59 transposed
Mch6g0807 Mch-Chr6:5618986 Mch8g3147 Mch-Chr8:33763076 7.61E-248 wgd
Mch8g3147 Mch-Chr8:33763076 Mch9g0371 Mch-Chr9:2752302 2.07E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77648 PF07714 PK_Tyr_Ser-Thr 6.20E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g3147 - - - 0.0