Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g3155 ATGGACTCTCCTCCGGCCAAGTGTTGGAGCATCCACACCCGCCCGGAGATCATCCAGAAGTACCAGATCCTCGAGCGGGTCGGATCCGGCGCATATTCGGATGTCCACCGTGCGCGGCGGCTCTCCGACGGGGTCATCGTTGCGTTGAAGGAGATCCACGATTATCAGTCCGCCTTCCGCGAAATTGAGGCGCTACAAATTTTACAAGGTTTGCCGAATATCGTCGTTTTGCATGAGTACTTTTGGCGCGAGGATGAGGACGCCGTGCTTGTTCTCGAGTTTCTGAAAACGGATTTGGCCACGGTTATAGCGGAGGCGAAGAAGCGAGGATCGGGCGGGGTAGATTCCGGGCGTGGGCTCGCGGCTGGGGAGGTGAAGCGTTGGATGATCCAGATTTTAAGTGGTCTTGATGCTTGTCATGGGAATATGTTCGTCCACAGGGATTTGAAGCCTAGCAATTTGTTGATCTCCGACGATGGCGTGCTCAAGCTTGCCGATTTTGGACAGGCAAGAATACTCATGGAGCCTGGATATGTTGAATCCAATGAGATCCCGGAACCATCTGAGGTGAACTCTTCAGATCAAGTACCTGCTTCTCAGCCATCTGCAATTTTTCCCGGAACAGAAATCTCGGTTCGAGGAGATAACAGAACTGGGGAGCAAGAACCAGTTAGCAAAGAGGAGTATTTTAGAGTATTAGACGAGGTGAAAGTGAAAAATTTAGCAAATGAATTTGATAAGGAAACATATACTTATGATGGAGATACATCTTGCTTAGCAACATGCACCACGAGTGACCTAGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAATGGATGGGGAAGTTCCAGCTGATGATGGTCAGGGTTCTCTCACGTCTTGTGTTGGGACTCGCTGGTTTAGGGCCCCCGAATTACTCTATGGATCTACGAACTACGGCTTGGAGATTGACTTATGGTCATTGGGCTGCATTTTTGCAGAGCTTCTTACATTGGAACCCCTTTTCCCAGGAACAGCTGACATTGATCAACTAAGCAAAATTTTCAGTGTTCTAGGCAACTTGACTGAAGATTCCTGGCCAGGTTGTTCCGAACTACCTGATTTTCAAATTATATCATTCAACAAAATAGAGCAGCCAATCGGTCTAGAAGCATGTCTTCCCAACTGTTCTCCCGACGAGATTTCTATCGTTAAAAGACTTCTTTGTTACGACCCGGCTAATCGAGCAACTGCTATGGAATTGCTTCAGGACAAGTATTTCACTGAGGAGCCACTTCCTATTCCCTTGTCTGAGCTTCATGTTCCTTCAACCAGAAGTGTACAGGATGAGCATTCTCCTGCGGGATGGTACGACTATGACGAGTCGGATTCTGATATGGATGATCTTGAACCCATGAATGTTACCACCAGCGCCACCGGTTACTCCATACGATTCCATTGA 1449 47.62 MDSPPAKCWSIHTRPEIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGLPNIVVLHEYFWREDEDAVLVLEFLKTDLATVIAEAKKRGSGGVDSGRGLAAGEVKRWMIQILSGLDACHGNMFVHRDLKPSNLLISDDGVLKLADFGQARILMEPGYVESNEIPEPSEVNSSDQVPASQPSAIFPGTEISVRGDNRTGEQEPVSKEEYFRVLDEVKVKNLANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYEMDGEVPADDGQGSLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELLTLEPLFPGTADIDQLSKIFSVLGNLTEDSWPGCSELPDFQIISFNKIEQPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDKYFTEEPLPIPLSELHVPSTRSVQDEHSPAGWYDYDESDSDMDDLEPMNVTTSATGYSIRFH 482
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 33811609 33814586 - MC08g2503 Mch8g3155 696776
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch8g3155 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3155 482 PANTHER CELL DIVISION PROTEIN KINASE 20 423 IPR050108 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0019912(PANTHER)
Mch8g3155 482 FunFam Cyclin-dependent kinase F-1 12 106 - -
Mch8g3155 482 ProSiteProfiles Protein kinase domain profile. 21 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3155 482 Gene3D Transferase(Phosphotransferase) domain 1 114 206 - -
Mch8g3155 482 Gene3D Transferase(Phosphotransferase) domain 1 261 434 - -
Mch8g3155 482 SUPERFAMILY Protein kinase-like (PK-like) 7 444 IPR011009 -
Mch8g3155 482 MobiDBLite consensus disorder prediction 185 206 - -
Mch8g3155 482 Gene3D Phosphorylase Kinase; domain 1 12 111 - -
Mch8g3155 482 SMART serkin_6 21 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3155 482 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524(InterPro)
Mch8g3155 482 Pfam Protein kinase domain 21 176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3155 482 Pfam Protein kinase domain 292 423 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3155 482 MobiDBLite consensus disorder prediction 184 224 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g3155 Mch-Chr8:33811609 Mch4g2347 Mch-Chr4:24752181 2.02E-34 dispersed
Mch8g3155 Mch-Chr8:33811609 Mch10g1090 Mch-Chr10:8041558 7.14E-36 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77649 PF00069 Pkinase 5.40E-30 CL0016 Mch PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g3155 - - - 0.0