Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g3186 ATGAAGACCAAGACGCCATTGAAGCAGCTCAAGCTATCTGTTCCTGCTCAAGAAGCTAATATCCATTCTTTCCTGACTGCGAGTGGAACATTTCACGACGGCAATCTGCTATTGAACCAGAAAGGTTTGCGGCTCATATCCGAAGAGAAAGAAGCGCAGACTTCAGACAGTAAGGAGTTGGATGCCGATTTCTCATTGGAGGACCTTGAGACTGTGAAAGTCATCGGGAAGGGAAGTGGGGGTGTAGTACAGCTTGTTCAACACAAATGGGTTGGAAAACTTTTTGCCTTAAAGGTCATCCAGATGAACATACAAGAGGATATCCGTAAACAGATAGTGCAGGAGCTGAAAATAAATCAAGCAGCCCAATGTCCTCATGTTGTGGTCTGCTATCATTCTTTCTACCACAATGGTGCCATTTCTCTTGTGCTAGAATACATGGATCGGGGTTCATTAGCTGATGTTGTCAGACAAGTCAAAACGATTCTCGAACCATATCTTGCAGTTGTTTGTAAACAGGTTTTACAAGGTCTTGTTTACTTGCATCATGAAAGACATGTTATCCACAGAGACATCAAACCATCCAATCTACTCGTGAACCATAAAGGAGAGGTGAAAATCACCGATTTTGGAGTAAGTGCAATGCTAGCAAGTTCTATGGGTCAGAGAGATACATTTGTAGGGACTTACAATTACATGTCGCCCGAGCGAATTAGCGGGGGAACGTATGACTACAGCAGCGATATCTGGAGTTTAGGCCTGGTTGTACTTGAATGTGCCATTGGAAGATTTCCCTACTTGCAGTCCGAAGAGCAGCAAAGTTGGCCAAGTTTCTATGAGCTTTTAGAGGCAATTGTGGCAAAGCCACCACCTTCTGCCCCACCAGATCAATTTTCCCCCGAGTTCTGTTCCTTCGTATCTGCTTGCATTAAAAAGGACCCTAAAGAAAGATCATCATCTTTAGACCTTCTGGATCATCCTTTCATCAAGAAATTTGAAGACAAAGACATCGATCTCGGGATTCTCGTTGGCAGCTTGGATCCCCCTGTAAGTTTTCCCAGATAA 1065 43.85 MKTKTPLKQLKLSVPAQEANIHSFLTASGTFHDGNLLLNQKGLRLISEEKEAQTSDSKELDADFSLEDLETVKVIGKGSGGVVQLVQHKWVGKLFALKVIQMNIQEDIRKQIVQELKINQAAQCPHVVVCYHSFYHNGAISLVLEYMDRGSLADVVRQVKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGGTYDYSSDIWSLGLVVLECAIGRFPYLQSEEQQSWPSFYELLEAIVAKPPPSAPPDQFSPEFCSFVSACIKKDPKERSSSLDLLDHPFIKKFEDKDIDLGILVGSLDPPVSFPR 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 34037596 34045944 - MC08g_new0658 Mch8g3186 696807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g3186 354 ProSiteProfiles Protein kinase domain profile. 69 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3186 354 PANTHER DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED 45 341 - GO:0000165(PANTHER)|GO:0004708(PANTHER)
Mch8g3186 354 SMART serkin_6 69 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3186 354 FunFam Mitogen-activated protein kinase kinase 6 150 348 - -
Mch8g3186 354 Pfam Protein kinase domain 70 329 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3186 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3186 354 Gene3D Phosphorylase Kinase; domain 1 38 148 - -
Mch8g3186 354 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524(InterPro)
Mch8g3186 354 CDD PKc_MAPKK_plant_like 67 333 - -
Mch8g3186 354 FunFam Mitogen-activated protein kinase kinase 6 39 148 - -
Mch8g3186 354 Gene3D Transferase(Phosphotransferase) domain 1 150 343 - -
Mch8g3186 354 SUPERFAMILY Protein kinase-like (PK-like) 67 339 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1481 Mch-Chr8:11163807 Mch8g3186 Mch-Chr8:34037596 1.98E-78 dispersed
Mch8g3186 Mch-Chr8:34037596 Mch6g0715 Mch-Chr6:4914990 5.69E-23 dispersed
Mch8g3186 Mch-Chr8:34037596 Mch8g3227 Mch-Chr8:34329790 2.10E-144 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77651 PF00069 Pkinase 2.10E-65 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g3186 K04368 - csv:101218848 674.47