Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g3226 ATGACGTCGGTGGCGGTTGCCGTTAATGGCGGAAGGGGCGGCGGCGGCGGAAGCAGACGCGCCGTCAGATGGGCCGTCGAGAATCTGTTGCCAACCGCCGATCGTTTCATCTTGGTTCACGTTATGCCCAAAATCACCTCCATCCCCACCCCAATGGGGGATCGTGTGGCTGTGTCGGAGTTAGACGCCGACGTGGTAGCACTGTACGTTCACGATGTGAAGGAGAAATATGAACAAGTTTTTGCCCCTTTTAAGAAGTTATGTAGAAGAGAAAAGTTTCTTCTTTTGGTAGAGACTTTGGTTTTGGAGGATGACAATCCTGCCACTGCGCTTCTTAGATATGTATCTGAGTCTGGGATTAAACGCTTGGTTTTGGGTTCTTGTTTTAGAAGCTGCATAGCAAGGAAGCTAAAAGGGCCTTCAGTACCCTCTGCTATTCTGAGAGCTGCTCCTGCTTCTTTTGATATCTATGTTATATATAAGGGAAGAGTCATCACAAGACCAACCGCTACTGCTCCATCTACTGAAACAGACTCGAGGCAGTGGATGCTCGGTGATACCGATTACTACCGCGGCTCTGGTGCCATTAGCGAACAATCGTCTGCAACTTTCTCTTCTTCTTCAGTGTCGAATGTTCATCAAAGGGGTGATAGCCTTGAAGGCAATTCTACCGAGCAACTGAACTCTTTGAGTACTCTGACTGAGGAGATGGAATTTTGTCACCATTCATGTGGTAATGAGGCAATGCATCGATCCGGTGAGTTCTTAAATAAAGGTCCTGAATTGCAGGAAGATATGCGGGCTGAAGTCGAATCACTGCAACTAGAATTAGAAACCACCGTTTCGTTGTACAAACGAGCTTGTGAAGAACTAGTACATGCTCAAAAGCAGGTTCAGTCACTTACGTCTGAATGCCTTGAAGAATCAAGGAGAGTGAGTGAGGCCTTAGAAAGGGAACAAGCTTTGAGAACAGTTGCTTCTGAAGAAAAAGCAAAGCACCTGGAAGCCATGAAGGAGCTGGAAGAGGCAAAAGATTTGCTGGCTAAAGAGGCTTATGAAAGGCAGCTGGCTGACCTTAATGCCTTAAAGGAGTCCGTGGAGAAGCAGAAAATTGTTGATACTCTTCTCACTAATGACAGGAGGTACAGAAGATATACCCCAGCTGAAATAGAAGCAGCGACGAATTTCTTCGAACAAGTTAACGTGATCGGCGAGGGAGGATATGGGAAAGTTTACCGATGCAGTCTTGATCATACCCCTGTTGCTATTAAGGTTCTTCAACACGACGTACTCGAGAAAAAGGACGAGTTTCTGAAAGAGGTTGAAATTCTGAGCCAAATACGCCATCCACACGTGGTTTTACTGCTTGGAGCTTGCCCCGAGCAAGGTTGCTTGATCTATGAGTACATGGAAAATGGAAGCCTAGATGATCATATCTTGCTCCGGAATGGAAAAACTCCACTGCCTTGGTTTGTTAGATTTAGAATAGCTTTTCAAGTAGCTTCTGGGCTTGCATTTTTACACAATTCAAACCCAGAGCCTATAATTCACAGAGATCTAAAACCGGGTAATATCTTACTAGACAGAAACTATGTAAGCAAAATCTCAGATGTGGGGATGGCTAAGATCATTGGCGATATCGTGCCCGACAATGTCACGGAGTACAGAAACACCATTCTTGCTGGAACTCTCCATTACATGGATCCTGAGTATCAGAGAACTGGCACCCTCCGACCAAAGTCGGATACGTATGCTCTTGGAGTAACAATTCTGCAGCTGTTGACAGGGCGGCAGCCACATGGTCTTCTTCTCGCTGTTGAGAGTTCCATCGCAAGTTCCTCCCTCGGAGATATTCTAGATAGATCAATTACTGACTGGCCTCTGGCTGAAGCCGAAGTGCTAGCTCGACTTGCGCTGAAGTGCTTGAAACTTAGATGCAGGGATAGGCCAGATCTTGATACTGAAGTTCTTCCAGTTCTTAAAAGACTTGTTGATTTTGCAGATGCTTGTCAAAATGAAGAAAAGTGTCCTGCCAATCCCCCGAGCCACTACTTCTGCCCAATCCTTCAGGAAATAATGAATGATCCTTATATAGCAGCAGATGGGTTTACTTACGAGTACGTAGCGATTAAAGCGTGGCTCGAGAAACATGACTTATCGCCCGTGACAAAGCTTAAGCTCCAGCATTCTATGTTTATTCCAAACCATACTCTGCGTTCTGCCATACAGGAATGGAGGTCAAGAGTGACATTTCCATCTTCC 2262 45.8 MTSVAVAVNGGRGGGGGSRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDRVAVSELDADVVALYVHDVKEKYEQVFAPFKKLCRREKFLLLVETLVLEDDNPATALLRYVSESGIKRLVLGSCFRSCIARKLKGPSVPSAILRAAPASFDIYVIYKGRVITRPTATAPSTETDSRQWMLGDTDYYRGSGAISEQSSATFSSSSVSNVHQRGDSLEGNSTEQLNSLSTLTEEMEFCHHSCGNEAMHRSGEFLNKGPELQEDMRAEVESLQLELETTVSLYKRACEELVHAQKQVQSLTSECLEESRRVSEALEREQALRTVASEEKAKHLEAMKELEEAKDLLAKEAYERQLADLNALKESVEKQKIVDTLLTNDRRYRRYTPAEIEAATNFFEQVNVIGEGGYGKVYRCSLDHTPVAIKVLQHDVLEKKDEFLKEVEILSQIRHPHVVLLLGACPEQGCLIYEYMENGSLDDHILLRNGKTPLPWFVRFRIAFQVASGLAFLHNSNPEPIIHRDLKPGNILLDRNYVSKISDVGMAKIIGDIVPDNVTEYRNTILAGTLHYMDPEYQRTGTLRPKSDTYALGVTILQLLTGRQPHGLLLAVESSIASSSLGDILDRSITDWPLAEAEVLARLALKCLKLRCRDRPDLDTEVLPVLKRLVDFADACQNEEKCPANPPSHYFCPILQEIMNDPYIAADGFTYEYVAIKAWLEKHDLSPVTKLKLQHSMFIPNHTLRSAIQEWRSRVTFPSS 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 34326654 34329982 + MC08g2564 Mch8g3226 696847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g3226 754 Coils Coil 284 304 - -
Mch8g3226 754 Pfam Protein tyrosine and serine/threonine kinase 399 653 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3226 754 ProSiteProfiles U-box domain profile. 679 752 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Mch8g3226 754 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 679 750 IPR013083 -
Mch8g3226 754 Gene3D HUPs 1 154 IPR014729 -
Mch8g3226 754 CDD STK_N 3 162 - -
Mch8g3226 754 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 369 469 - -
Mch8g3226 754 Pfam U-box domain 681 746 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Mch8g3226 754 Coils Coil 323 369 - -
Mch8g3226 754 SUPERFAMILY RING/U-box 671 748 - -
Mch8g3226 754 SUPERFAMILY Protein kinase-like (PK-like) 380 653 IPR011009 -
Mch8g3226 754 Gene3D Transferase(Phosphotransferase) domain 1 470 674 - -
Mch8g3226 754 SMART serkin_6 397 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3226 754 SMART Ubox_2 683 745 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Mch8g3226 754 Pfam Universal stress protein family 14 152 IPR006016 -
Mch8g3226 754 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 2 151 - -
Mch8g3226 754 PANTHER OS02G0152300 PROTEIN 4 743 IPR051348 -
Mch8g3226 754 ProSitePatterns Protein kinases ATP-binding region signature. 403 424 IPR017441 GO:0005524(InterPro)
Mch8g3226 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3226 754 ProSiteProfiles Protein kinase domain profile. 397 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3226 754 MobiDBLite consensus disorder prediction 206 226 - -
Mch8g3226 754 FunFam Os07g0541700 protein 470 560 - -
Mch8g3226 754 Gene3D Phosphorylase Kinase; domain 1 376 469 - -
Mch8g3226 754 CDD RING-Ubox_WDSUB1-like 681 735 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g0670 Mch-Chr7:11369338 Mch8g3226 Mch-Chr8:34326654 2.65E-71 dispersed
Mch8g3226 Mch-Chr8:34326654 Mch3g0010 Mch-Chr3:81591 4.10E-52 dispersed
Mch6g2652 Mch-Chr6:28210210 Mch8g3226 Mch-Chr8:34326654 2.01E-152 transposed
Mch8g3226 Mch-Chr8:34326654 Mch9g0239 Mch-Chr9:1808550 7.76E-131 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77653 PF00069 Pkinase 1.90E-40 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g3226 - - - 0.0