Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch8g3244 | ATGAGCGGAAGGAGCAGTAGGTTCCCATTTACTGCAGCTCAGTGGCAAGAGCTGGAGCACCAAGCTCTCATCTTCAAGTACATGGTCTCCGGCATCCCAGTCCCTCCCGATCTGCTCTACACCATTAAGAGAAGCTCTCTGGATTCTCCCTTCATTTCTAGGCTTTTCCCTCAGCACTATCCAGACGTTGGATGGAACTATTTGCAGATGGGTTCGGGGAGGAAAATCGACCCGGAGCCTGGAAGGTGCAGAAGAACGGATGGCAAAAAATGGAGATGCTCCAAAGAGGCATACCCGGATTCTAAATACTGCGAGAGACATATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAACAACAACAACACCAACAACACCAGCAACAGCTCTTAACTCAAATCCATCCACCCCAGCTATCTCATCCATCACCCAGAACTCCGCCCTCTCTTCTTTACCCTCTGACCCCCATAACCATAACCATTCTTGTTTCAATACTCATTCTCCCCACCCTTTTCTCTACCAACATGGTTCTTCTTCTTCAAGGCCCCCTGGTTCTGCTCTACACCAAAACTCCAATACCTCCATGCTTTTCGACAACCCAGATTACAGAAGAAGAAACAGGTATGTTTATGGGCTGAAGGAAGATGGTGATGAGCATCCTTTTCTGTCGGAAGAACATTCTGGGAACATGAGAGGCTTCTCTGCTTCATCACTGGAAGATTCCTGGCAGCTTACTCCTCTGACAATGAGTTGCTCTTCCTCATCCTCCAGACACAAGAACTGCTCTGCTTTACAAGGGGACTACTCTTCTTACTTGCAGCTGCAGAGTTTTGGCGATTCCCCAAAGCAACTCAAGCAAGAGGAGCATTACTATGAGATGCAGAATAAGATGGGAAGAGAGGAACCCCAGAAGATTATGCATCACTTCTTTGACGAATGGTCTCCGAAAGATAGAGAATCGTGGCTTGATTTGGATGATAAGTCGTCCAATACTGGCTCAGTTTCTGCAACCCGGCTTTCGATGTCTATTTCAAACAACTCATTGCAACATGACTTCTCCTCCATCTTCAATTCCAATAAGCATAATGAAAAC | 1113 | 46.45 | MSGRSSRFPFTAAQWQELEHQALIFKYMVSGIPVPPDLLYTIKRSSLDSPFISRLFPQHYPDVGWNYLQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTTTTPTTPATALNSNPSTPAISSITQNSALSSLPSDPHNHNHSCFNTHSPHPFLYQHGSSSSRPPGSALHQNSNTSMLFDNPDYRRRNRYVYGLKEDGDEHPFLSEEHSGNMRGFSASSLEDSWQLTPLTMSCSSSSSRHKNCSALQGDYSSYLQLQSFGDSPKQLKQEEHYYEMQNKMGREEPQKIMHHFFDEWSPKDRESWLDLDDKSSNTGSVSATRLSMSISNNSLQHDFSSIFNSNKHNEN | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 34427956 | 34429334 | - | MC08g2581 | Mch8g3244 | 696865 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch8g3244 | 371 | MobiDBLite | consensus disorder prediction | 125 | 147 | - | - | |
Mch8g3244 | 371 | PANTHER | GROWTH-REGULATING FACTOR 5 | 4 | 351 | IPR031137 | GO:0005634(InterPro)|GO:0006351(InterPro)|GO:0032502(InterPro) | |
Mch8g3244 | 371 | MobiDBLite | consensus disorder prediction | 179 | 206 | - | - | |
Mch8g3244 | 371 | ProSiteProfiles | WRC domain profile. | 77 | 121 | IPR014977 | - | |
Mch8g3244 | 371 | ProSiteProfiles | QLQ domain profile. | 9 | 44 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Mch8g3244 | 371 | Pfam | QLQ | 9 | 42 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Mch8g3244 | 371 | Pfam | WRC | 78 | 120 | IPR014977 | - | |
Mch8g3244 | 371 | MobiDBLite | consensus disorder prediction | 153 | 172 | - | - | |
Mch8g3244 | 371 | SMART | QLQ_2 | 8 | 44 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch8g1029 | Mch-Chr8:7258219 | Mch8g3244 | Mch-Chr8:34427956 | 2.37E-53 | dispersed | |
Mch5g1644 | Mch-Chr5:17271562 | Mch8g3244 | Mch-Chr8:34427956 | 2.97E-35 | transposed | |
Mch6g0964 | Mch-Chr6:6816675 | Mch8g3244 | Mch-Chr8:34427956 | 6.07E-115 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
43974 | PF08879 | WRC | 7.80E-21 | No_clan | Mch | TF |
Pathway information
