Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g3249 TTCACCTTCGCCGAGTTGAAGCTAATTTCCCAGAGCTTTTCCTCCTCTAACTTCCTCGGAGAAGGTGGGTTCGGCCCCGTCTACAAGGGCTTCGTCGATGACAATCTCAGGCCCGCCTTGCCCGCTCAGCCCGTCGCTATTAAACTCCTCGATTTGGATGGCACCCAAGGCCACAGGGAGTGGCTGACGGAGGTGATTTTTCTTGGGCAACTCAAGCACGCCCACCTTGTGAAGCTCATTGGGTACTGCTGCGAAGACGAGCATAGGCTGCTTGTGTATGAGTATATGCCCAGAGGAAGCTTGGAGAATCAACTTTTCAAAAAATATTCAATCCCATTGCCGTGGTCCACCAGAATGAAGATCGCTCTTGGAGCTGCACAGGGTCTGGCATTTCTCCATGGAGCAGAAAAGCCAGTCATTTATCGGGATTTCAAAGCCTCAAACATTCTGTTGGATTCTGATTACACCGCGAAGCTGTCTGATTTTGGGTTGGCAAAGGATGGTCCAGAAGGAGACAACACACACGTCTCCACCCGAGTTATGGGGACGCACGGATATGCTGCGCCGGAGTATATAATGACTGGGCATTTGACGGCGATGAGTGATGTGTATAGCTTCGGAGTAGTGCTTTTGGAGCTGCTGACAGGGCGGAGGTCGGTGGAGAAGAGCAGCCGCCGCAGGCAGCAGAACTTGGCAGAGTGGGCAAGGCCGTTGCTGAACGATCACAGAAGACTCGGCCGAATAATAGACCCCAGACTGGAAGGCCAATACTCGGAAATGGGAGCTCAAAAGGCAGCCGCATTGGCTTACCAGTGCTTGAGCCACCGCCCCAAGCAGAGGCCCACAATGAGCGCCGTGGTCAAGGTATTAGAG 873 53.26 FTFAELKLISQSFSSSNFLGEGGFGPVYKGFVDDNLRPALPAQPVAIKLLDLDGTQGHREWLTEVIFLGQLKHAHLVKLIGYCCEDEHRLLVYEYMPRGSLENQLFKKYSIPLPWSTRMKIALGAAQGLAFLHGAEKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGDNTHVSTRVMGTHGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVEKSSRRRQQNLAEWARPLLNDHRRLGRIIDPRLEGQYSEMGAQKAAALAYQCLSHRPKQRPTMSAVVKVLE 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 34453422 34454641 + MC08g2586 Mch8g3249 696870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g3249 291 Pfam Protein tyrosine and serine/threonine kinase 17 290 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3249 291 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Mch8g3249 291 Gene3D Transferase(Phosphotransferase) domain 1 96 291 - -
Mch8g3249 291 FunFam Serine/threonine-protein kinase BIK1 1 95 - -
Mch8g3249 291 PIRSF ILK 41 291 - -
Mch8g3249 291 SUPERFAMILY Protein kinase-like (PK-like) 2 290 IPR011009 -
Mch8g3249 291 CDD STKc_IRAK 19 291 - -
Mch8g3249 291 PANTHER OS01G0588500 PROTEIN-RELATED 1 291 IPR050823 -
Mch8g3249 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3249 291 ProSiteProfiles Protein kinase domain profile. 13 291 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3249 291 FunFam Probable serine/threonine-protein kinase PBL8 96 291 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0925 Mch-Chr10:6545466 Mch8g3249 Mch-Chr8:34453422 1.02E-145 dispersed
Mch11g0459 Mch-Chr11:2900962 Mch8g3249 Mch-Chr8:34453422 5.67E-139 dispersed
Mch6g1020 Mch-Chr6:7231172 Mch8g3249 Mch-Chr8:34453422 4.14E-138 dispersed
Mch8g2586 Mch-Chr8:29005514 Mch8g3249 Mch-Chr8:34453422 2.04E-135 dispersed
Mch8g3249 Mch-Chr8:34453422 Mch9g2164 Mch-Chr9:22324118 4.41E-120 dispersed
Mch6g0978 Mch-Chr6:6907427 Mch8g3249 Mch-Chr8:34453422 7.51E-180 wgd
Mch8g3249 Mch-Chr8:34453422 Mch9g0216 Mch-Chr9:1630856 9.69E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77655 PF07714 PK_Tyr_Ser-Thr 6.80E-47 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g3249 - - - 0.0