Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch8g3250 TTCCTTCATTCCCAATCCCAAGGAAGCGGAAAAAAAGGTTTGCCCAACACACTCACAGAAGAGACAACCACGCAATTCTTCGAACAGCGGCTGGTTTCTATCCGGAGCTATTCCATTTTCCGTTCCGGCTCTGCAATGGCCGCTGTTCGACTTCTCTTCCTCTTCCTCTTCCTCGGTCGCCTTCCGGCCTCCTCTCCCCTCTCCGAAAACGAGGCCCTCCTCAAGCTCAAGCAATCCTTCACCCACGCCGAATCCCTAAATTCCTGGAACTCCGACTCCGTCCCCTGCGCCGCTCGATGGACCGGCATCATGTGCAACAGGGGCGTCATCACCGGCCTCCACCTCACCGGCCTCCAGCTCTCCGGCAAGATCGACGTCCACGCTCTCCTCGAGCTCCGTAGTCTCCGAACCATCAGCCTGGTCAACAACAGCTTCTCCGGCCCCATTCCGGAGTTCAACAAACTCGGCGTTCTCAAGTCCCTCCTTCTAACCGGGAACGACTTTTCCGGAGCCATCCCCAGCGATTTCTTCTCCGCCCTCACCTCCCTCAAGAAGGTATGGCTCAACGCCAACAAATTCTCCGGAAACATACCGCACTCTCTGGCGCAGCTGTCCCATCTAATCGAGCTCCACTTGGAAGGCAACCAATTCTCGGGCCCCATTCCCGACTTGAAGCAGACCTCCATATCCTCCCTGGATTTATCCAACAACAAGCTGGTGGGGCAAATACCCGAGAGCCTGTCCAAGTTCGAAGCAAAGGCATTTGGGGGGAACGAGGGCCTGTGCGGGAAGCCACTCCCCAAATCTTGCGAAGAAGGTGAAAAACCACCTCCTTCTCCTCCGGGGGAGTCGCAGGGCAACGTGTCGAAATTAGTGGTGGCGTCGTTGATAGCGATCGTGGTGTTTCTGATGGTGTTTATATTTCTGAGCGCGTCGAAGCGAAAGGAGGATGAGTTCAGCGTGCTGGGGAGAGAGCAGATGGAGGAGGTGGTGGAGGTGCACGTGCCGAGCTCTTCGCACGAGCGGACGAGCAGAAGGGGCGGGGACTCGAAGAGAGGGTCGTCGCAGCAGGGGAAGGGGGGGATGAGCGATCTTGTGGTGGTGAATGAGGAGAAGGGTTCGTTTGGGTTGGCGGATTTGATGAAGGCTGCGGCGGAGGTGCTGGGGAACGGTGGGTTGGGCTCCGCGTACAAGGCGGTGATGTCCAACGGGCTGTCGGTGGTGGTCAAGAGAATGAGGGAAATGAACAAGCTGGGGAAGGATGGGTTCGATGCGGAGATGAGGCGCATGGGGAGGCTGCGCCATCAGAATATATTGACGCCTTTGGCCTACCATTACAGGAGAGAGGAGAAGCTGATGGTGTCGGAGTACATTCCAAAAGGCAGTCTCTTGTATGTGCTGCATGGGGACCGCGGAGCCTGCCATGCTGAGCTGAACTGGGCGACCCGGTTGAGGATTGTGCAGGGGATCGCGAGGGGAATGGGGTTCCTCCACTCGGAATTCGCCACGTACGATCTGCCGCACGGGAATCTCAAGTCCAGCAACGTTCTTCTAAGCGACAACTACGAGCCCCTTCTGAGCGACTACGCGTTTCATCCCCTGATCAACCCCAACAATGCCACCACCGCAATGTTTGCGTACAGATCCCCGGAGTACACGCAATACCAGGAAGTTTCTCCAAAGTCTGATGTTTATTGCCTTGGCATTATCATTCTCGAAATTCTGACCAGCAAATTTCCTTCTCAATATCTTAGCAATGGCAAGGGTGGCACGGATGTGGTGCAGTGGGTCTCCTCCGCAGTTTCCGAGAAGAGGGAGGCCGAACTCATCGACCCAGAGATCGCAAACGACACCGCTGCACTCGATCGGATGGTGGAGCTCCTCAGAATCGGCGCAGATTGCACCAACAGCAATCCTAAGCAACGGCCAGAAATGAAGGAAGCCATTAGGAGAATAGGAGAAATATAA 1968 55.89 FLHSQSQGSGKKGLPNTLTEETTTQFFEQRLVSIRSYSIFRSGSAMAAVRLLFLFLFLGRLPASSPLSENEALLKLKQSFTHAESLNSWNSDSVPCAARWTGIMCNRGVITGLHLTGLQLSGKIDVHALLELRSLRTISLVNNSFSGPIPEFNKLGVLKSLLLTGNDFSGAIPSDFFSALTSLKKVWLNANKFSGNIPHSLAQLSHLIELHLEGNQFSGPIPDLKQTSISSLDLSNNKLVGQIPESLSKFEAKAFGGNEGLCGKPLPKSCEEGEKPPPSPPGESQGNVSKLVVASLIAIVVFLMVFIFLSASKRKEDEFSVLGREQMEEVVEVHVPSSSHERTSRRGGDSKRGSSQQGKGGMSDLVVVNEEKGSFGLADLMKAAAEVLGNGGLGSAYKAVMSNGLSVVVKRMREMNKLGKDGFDAEMRRMGRLRHQNILTPLAYHYRREEKLMVSEYIPKGSLLYVLHGDRGACHAELNWATRLRIVQGIARGMGFLHSEFATYDLPHGNLKSSNVLLSDNYEPLLSDYAFHPLINPNNATTAMFAYRSPEYTQYQEVSPKSDVYCLGIIILEILTSKFPSQYLSNGKGGTDVVQWVSSAVSEKREAELIDPEIANDTAALDRMVELLRIGADCTNSNPKQRPEMKEAIRRIGEI 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 34456642 34459133 + MC08g2587 Mch8g3250 696871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch8g3250 655 MobiDBLite consensus disorder prediction 266 286 - -
Mch8g3250 655 MobiDBLite consensus disorder prediction 331 363 - -
Mch8g3250 655 SUPERFAMILY L domain-like 67 249 - -
Mch8g3250 655 Gene3D Ribonuclease Inhibitor 227 273 IPR032675 -
Mch8g3250 655 MobiDBLite consensus disorder prediction 331 349 - -
Mch8g3250 655 Pfam Protein tyrosine and serine/threonine kinase 385 651 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch8g3250 655 Pfam Leucine rich repeat N-terminal domain 68 106 IPR013210 -
Mch8g3250 655 Gene3D Transferase(Phosphotransferase) domain 1 458 655 - -
Mch8g3250 655 Gene3D Phosphorylase Kinase; domain 1 350 457 - -
Mch8g3250 655 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 68 655 IPR046959 -
Mch8g3250 655 SUPERFAMILY Protein kinase-like (PK-like) 386 650 IPR011009 -
Mch8g3250 655 ProSiteProfiles Protein kinase domain profile. 382 655 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch8g3250 655 FunFam Nuclear pore complex protein NUP107 67 223 - -
Mch8g3250 655 Gene3D Ribonuclease Inhibitor 68 226 IPR032675 -
Mch8g3250 655 Pfam Leucine Rich Repeat 229 249 IPR001611 GO:0005515(InterPro)
Mch8g3250 655 FunFam Pollen receptor-like kinase 1 458 655 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch10g0333 Mch-Chr10:2207522 Mch8g3250 Mch-Chr8:34456642 4.19E-76 dispersed
Mch8g1318 Mch-Chr8:9634757 Mch8g3250 Mch-Chr8:34456642 7.30E-99 dispersed
Mch8g3250 Mch-Chr8:34456642 Mch9g1940 Mch-Chr9:20871966 4.82E-80 dispersed
Mch8g3250 Mch-Chr8:34456642 Mch6g0451 Mch-Chr6:3004373 1.18E-95 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77656 PF00069 Pkinase 3.40E-28 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch8g3250 K28077 - csv:101215919 1023.46