Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0002 ATGATAATAATGGCAGACGAAGTTCAGAATGACGTGAACGAACAGGTGGCAGATATTGCCCCCTTTGATCCAACTAAGAAGAAGAAGAAGAAGAAGGTTGTGCTTCAGGATCCGGCTGATGAGTCTGTTGACAAGTTAGCAGAGAAAACCGAAAGCTTGGCAGTTTCTGAAGGACTTGAGACTACGACCTTTTCTGGACTTAAAAAGAAGAAAAAACCAGTAGAGGCCAGCTCCTTGAATGACGATGGTGTAGATGGCACGGAGGATTTGGATGATCAAGCGGGGGAGAATGAAGAACGAGAGGGGGTTGTTCTACAATATCGTTTTCCTTGGGAGGGAAGTGATCGCGATTATGAATATGAGGAGCTTCTTGGACGGGTATTCAACATTCTTAGAGAAAATAATCCAGAACTTGCCGGGGATAGGCGTAGAACAGTCATGAGGCCTCCACAAGTTCTTCGTGAAGGCACAAAGAAAACTGTTTTTGTCAACTTCATGGATTTATGTAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTATTGGCTGAACTGGGAACCAGTGGATCTCTTGATGGACAGCAGAGATTAGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGTCGATATGTCAATGAATATGTGATTTGTATTGGGTGCAAGAGTCCAGACACTATCCTTTCAAAGGAAAATCGACTCTTCTTTCTCAGATGTGAGAAGTGTGGTTCTGGACGATCGGTTGCTCCAATTAAAGCTGGTTTTGTTGCTCGTGTTGGGCGGAGGAACACTGGAACATGA 819 44.2 MIIMADEVQNDVNEQVADIAPFDPTKKKKKKKVVLQDPADESVDKLAEKTESLAVSEGLETTTFSGLKKKKKPVEASSLNDDGVDGTEDLDDQAGENEEREGVVLQYRFPWEGSDRDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNTGT 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 10283 36333 + MC09g0002 Mch9g0002 696884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0002 272 MobiDBLite consensus disorder prediction 25 99 - -
Mch9g0002 272 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 221 256 IPR016190 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch9g0002 272 FunFam Eukaryotic translation initiation factor 2 subunit 115 257 - -
Mch9g0002 272 Gene3D - 115 257 - -
Mch9g0002 272 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 27 258 IPR045196 GO:0001731(PANTHER)|GO:0001732(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005850(PANTHER)|GO:0006413(InterPro)|GO:0031369(PANTHER)
Mch9g0002 272 MobiDBLite consensus disorder prediction 33 51 - -
Mch9g0002 272 SMART eIF2Bneu4 142 251 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch9g0002 272 MobiDBLite consensus disorder prediction 82 96 - -
Mch9g0002 272 MobiDBLite consensus disorder prediction 64 78 - -
Mch9g0002 272 Pfam Domain found in IF2B/IF5 141 250 IPR002735 GO:0003743(InterPro)|GO:0006413(InterPro)
Mch9g0002 272 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 117 224 IPR016189 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0013 Mch-Chr3:145061 Mch9g0002 Mch-Chr9:10283 2.77E-169 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0002 K03238 - csv:101220978 505.753