Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0011 TGTCGAGTTTGCGGGGACGAAATCGGAGTCGACCAAGATGGCAAAGTGTTCGTGGCGTGTGTGGTGTGCAGTTTCCCCGTTTGCCGCCCTTGTTACGAATACGAAAGGAGCGAAGGCAACAAGTGCTGCCCCCAATGCAACACCCGCTATAAGCGCCACAAAGGTGGTCTTCTTCTTCTCCTTCTCCTCCTTCTCCTCCTTCTTCCACACATCACACATCAATTAACACACGCGCCTTCATTAATTTCCTCTGTAGGTTCTCCCAGAGTCATTGGGGATGATGAAGAAACTTACGATGTTGATGATTTTGATGATGAGTTCCCCGTTAACCATCCCCATCACCACTCTCAAACAAAACATCCTAACCATTCGGTAACAATCGCACTTAATTCTCTTATTAACCTTTCTAACCTGGTTTTATGCTTAAACTACAACTTTGGCCTACTGGTCTCTTCTAAATTTTTTAAAAATTCCTACAACGCTGAATGGAAGGAGAGAATAGATAAGTGGAAAGTCAGACAAGAGAAGAGAGGTTTGGTGAACAAAGACGATGGAAATAACAATAATGATCAAGGCGACGAAGACGACTACCTATTGGCTGAAGCCCGGCAACCCTTATGGCGGAAACTTCCAATATCTTCCAGCAAAATCAGTCCGTATCGCATAGTCATAGTTCTCCGCCTCGTAATTCTTGCCTTCTTCTTCCGTTTTCGGATCCTAACTCCGGCCTACGACGCATTCCCATTGTGGCTCATCTCTGTGATCTGCGAAATCTGGTTCGGTTTTTCATGGATACTGGATCAGTTCCCCAAATGGGCTCCCATCAACCGGGAAACCTACTTGGACCGCCTCTCCATGAGGTTCGAGCGCGAAGGCGAACCCAACCGCTTGTCCCCAGTTGATTTCTTCGTCAGTACTGTGGACCCTCTGAAGGAGCCCCCCATCATCACCGCCAACACTGTGCTCTCCATCCTCTCTGTGGACTATCCGGTGGACAAAGTGAGCTGCTATGTCTCCGACGATGGTGCTTCCATGTTGCTCTTCGATACTCTCTCCGAAACCGCGGAGTTTGCCCGGAGATGGGTGCCGTTTTGCAAGAAGTTCAGTGTTGAGCCCAGGGCTCCCGAGTTTTACTTCTCCCAGAAGATCGATTACTTGAAGGACAAAGTGCTGCCCAGCTTTGTGAAGGAGAGGAGAGCAATGAAGAGAGAATACGAAGAGTTCAAGGTGCGGATCAACGCGTTGGTGGCAAAGGCTCAGAAGAAACCTGAGGAAGGATGGGTTATGCAGGATGGCACTCCATGGCCAGGAAACATCACCCGTGATCATCCTGGCATGATACAGGTGTATCTGGGCAGTGAAGGTGCACTGGATGTAGAAGGTAAAGAATTGCCTCGTCTTGTATATGTTTCTCGTGAGAAACGCCCTGGATATCAGCACCACAAGAAAGCTGGTGCTATGAATGCTCTTGTTCGAGTCTCTGCAGTCCTCACAAATGCACCATTCATATTGAATCTGGATTGTGATCACTACGTCAACAACAGCAAAGCTGTAAGGGAGGCCATGTGCTTTCTAATGGATCCTCAGCTTGGCAAGAAGCTATGCTATGTTCAGTTTCCTCAAAGATTTGATGGTATTGATCGTCACGATAGATATGCTAATCGGAATATTGTGTTCTTCGATATCAACATGCGAGGACTAGATGGAATCCAAGGCCCAGTTTATGTTGGCACAGGATGTGTCTTCAATAGGCCAGCTTTATATGGATATGAGCCACCAGTCTCCGAGAAAAGGCCGAAGATGACATGTGATTGCTGGCCTTCATGGTGTTGCTTCTGTTGTGGTGGTTCAAGGAAGTCGAAGTCCAAGAAGAAAGGAGAAAGAGGTTTGTTTGGAAGTCTGTTCACAAAGAAGAAGAAGATGATGGGGAAGAGTTACGTTAGGAAAGTGTCGGGGCCAGTTTTTGATCTTGAAGAGATTGAAGAAGGGTTTGAAGGTTATGATGAGTTGGAGAAGTCATCACTCATGTCGCAAAAGAATTTCGAGAAAAGATTTGGGCAGTCTCCTGTTTTCATTGCTTCCACCCTTAAGGAAGATGGTGGGCTCCCAGAAGGAACTAATAGCACATCACTTATTAAAGAAGCCATCCATGTGATAAGTTGTGGTTATGAAGAAAAAACAGAATGGGGAAAAGAGATAGGTTGGATTTATGGTTCGGTTACAGAAGATATCTTGACAGGATTCAAGATGCATTGTAGAGGATGGAAGTCAGTGTACTGCATGCCACACAGACCAGCTTTCAAGGGGTCCGCTCCGATAAATCTCTCGGATCGTTTGCACCAAGTTCTGAGATGGGCTTTAGGTTCTGTTGAAATCTTCCTCAGTCGTCACTGCCCGCTGTGGTATGCTTATGGGGGAAAGCTAAAATGGCTTGAGAGGCTTGCCTACATCAACACTATTGTTTACCCTTTTACTTCCATTCCATTACTTGCATACTGCACCATTCCTGCTGTCTGTCTTCTCACTGGAAAATTCATCATCCCCACTTTGACAAACTTAGCTAGTGTCTGGTTCATGGCCCTGTTTATCTCCATCATTGCTACTGCCGTGCTGGAGCTTCGATGGAGTGAGGTGAGTATTGAGGACTTGTGGCGTAACGAGCAATTCTGGGTCATTGGTGGCGTCTCTGCGCATCTTTTTGCAGTGTTCCAAGGCCTGCTCAAGGTCCTTGGTGGAGTAGACACCAACTTCACAGTTACAGCAAAAGCAGCCGAGGATACCGAGTTTGGAGAGCTCTACCTTTTCAAGTGGACGACCCTCCTCATCCCGCCGACCACTCTTATAATCTTGAACATGGTGGGAGTGGTTGCTGGGGTTTCTGATGCAATCAACAATGGCTACGGGTCATGGGGTCCTCTATTTGGAAAGCTGTTTTTTGCTTTCTGGGTCATTGTTCATCTCTATCCTTTCCTCAAGGGTCTCATGGGAAGACAAAACAGAACCCCCACCATTGTAGTGCTCTGGTCCGTGCTCCTTGCATCCATATTTTCACTGGTTTGGGTGCGAATTGATCCATTCCTGCCCAAGCAAACTGGCCCCGTCCTCAAACAATGTGGAGTCGATTGCTAG 3129 47.04 CRVCGDEIGVDQDGKVFVACVVCSFPVCRPCYEYERSEGNKCCPQCNTRYKRHKGGLLLLLLLLLLLLPHITHQLTHAPSLISSVGSPRVIGDDEETYDVDDFDDEFPVNHPHHHSQTKHPNHSVTIALNSLINLSNLVLCLNYNFGLLVSSKFFKNSYNAEWKERIDKWKVRQEKRGLVNKDDGNNNNDQGDEDDYLLAEARQPLWRKLPISSSKISPYRIVIVLRLVILAFFFRFRILTPAYDAFPLWLISVICEIWFGFSWILDQFPKWAPINRETYLDRLSMRFEREGEPNRLSPVDFFVSTVDPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKFSVEPRAPEFYFSQKIDYLKDKVLPSFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNITRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRPKMTCDCWPSWCCFCCGGSRKSKSKKKGERGLFGSLFTKKKKMMGKSYVRKVSGPVFDLEEIEEGFEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPHRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLTNLASVWFMALFISIIATAVLELRWSEVSIEDLWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTAKAAEDTEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLVWVRIDPFLPKQTGPVLKQCGVDC 1042
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 86668 91279 - MC09g0009 Mch9g0011 696893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0011 1042 FunFam Cellulose synthase 417 591 - -
Mch9g0011 1042 Coils Coil 398 418 - -
Mch9g0011 1042 SUPERFAMILY RING/U-box 1 55 - -
Mch9g0011 1042 Pfam Cellulose synthase 300 1035 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Mch9g0011 1042 CDD mRING-HC-C4C4_CesA 1 49 - -
Mch9g0011 1042 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 220 1011 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Mch9g0011 1042 SUPERFAMILY Nucleotide-diphospho-sugar transferases 313 852 IPR029044 -
Mch9g0011 1042 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 106 IPR013083 -
Mch9g0011 1042 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 406 591 IPR029044 -
Mch9g0011 1042 Pfam Zinc-binding RING-finger 1 56 IPR027934 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g1060 Mch-Chr3:14170590 Mch9g0011 Mch-Chr9:86668 0 dispersed
Mch9g0011 Mch-Chr9:86668 Mch9g0557 Mch-Chr9:4059083 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0011 K10999 - csv:101205733 1829.68