Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g0029 | ATGGCTTCTACTACCGGTCTTGTAGTTGGGTCTTTTGTTTGGTTGGAGGATTCTGAAGAAGCTTGGATAGAGGGTGAAGTTTTAGAAATTCGTGGTGAAGACATTAAGGTCCTATGCACTTCAGGGAAAAAGGTGGTTGTTAAAGCAGCTAATGTCCATCCCAAAGATTCCGAAGTTCCACCTTGCGGGGTGGATGACATGACCAAGTTGGCTTACTTGCACGAACCAGGGGTGCTACACAATTTAAAATTGAGATATGATATCAATGAAATATATACTTATACAGGGAATATATTGATTGCTGTGAACCCTTTTACAAAATTACCTCATCTCTATGATAGCTATATGATGGCACAATATAAAGGGGCAGCATTTGGTGAGCTGAGTCCACATCCATTTGCAGTTGCAGATGCTGCCTACAGGCATTTTACAATATTTTTACTTATGATAAACGAGAAAAAGAGTCAATCCATATTGGTTAGTGGTGAAAGTGGGGCTGGAAAGACGGAAAGTACGAAATTACTTATGCGTTATCTTGCTTATATGGGAGGGAGGGCTGCTGCTGAGGGGAGGACTGTTGAGCAGCAAGTTCTTGAGTCAAATCCTGTTTTGGAAGCATTTGGGAATGCGAAGACTGTTAGGAACAACAACTCAAGTCGATTTGGTAAGTTTGTGGAGATCCAATTTGACCAAAACGGAAGAATATCAGGAGCCGCTATCAGAACTTACTTGCTGGAAAGATCACGTGTTTGTCAGGTGTCCGATCCTGAGAGAAACTATCACTGCTTCTATATGCTTTGTGCTGCACCACCTGAGGATATCGAGAAGTATAAATTGGGGAATCCAAGAACTTTTCATTATCTAAATCAATCGAACTGCTATGATCTGGATGGAATTGATGACTCCAAGGAATATCTTGCAACAAGAAGAGCAATGGAAGTTGTTGGAATAAGTTCTGATGAGCAGGATGGAATATTTCGCGTTGTGGCTGCAATTCTTCATCTTGGAAACATTGAATTTGCAAAAGGTAAGGAGGCCGATTCTTCTGTTCCCAAAGATGAAAAATCTTGGTTCCATCTTAGAACTGCGGCTGAGCTTTTCATGTGTGATGAAAAGGCTCTGGAAGATTCTCTGTGCAAGCGCGTGATCGTCACTCGTGACGAAACCATCACAAAGTGGCTGGATCCAAATTCTGCAGCTCTTAGTAGAGATGCTCTAGCAAAAATTGTGTATTCTAGGTTGTTTGACTGGCTTGTGGACAAAATTAATAACTCAATTGGTCAGGACCCTGATTCAAAGTTCTTGATTGGAGTGCTGGATATCTATGGATTTGAGAGTTTCAAGACAAACAGGTGCTCATCTGGTATGCCTTTTTCTTGGATAAGGAACAAAGAATTTCAAGCACTTCCATCAGTTTCTTATCTGTTCTTAACCATATTTAAATATTGCAGTTTTGAGCAATTTTGCATCAATTTGACTAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTATTCAAGATGGAACAAGAAGAGTACACAAAAGAGGAAATTGATTGGAGTTATATTGATTTTGTTGATAATCAAGACGTCCTTGATCTCATTGAAAAGAAACCTGGTGGTATTATTGCCCTTCTTGATGAAGCATGTATGTTCCCCAGATCAACTCATGAAACATTCGCTCAAAAGTTGTATCAGACATTCAAAAATCATAAACGTTTCAGCAAACCAAAATTAGCCCGGAGTGACTTCACAATTGCTCATTATGCCGGTGATGTCACCTATCAGACTGATTTGTTTCTGGACAAAAATAAAGACTATGTTGTTGCTGAACATCAAGCGCTCTTGACTGCTTCCAAATGCTACTTTGTGTCGTGTTTGTTTCCTCCATTAGCTGAAGAATCATCCAAATCATCAAAGTTCTCTTCAATAGGTTCTCGTTTCAAGCTACAATTGGTAGCACTGCTCGAAACTCTGAGTGCTACTGAGCCCCATTACATTCGATGTGTAAAGCCCAATAATCTTCTAAAGCCTTCCATCTTTGAGAATAAGAATATATTACAACAACTACGATGTGGGGGAGTCATGGAGGCGATTAGGATAAGTTGTGCTGGTTTTCCCACGAGGAAAACATTTGATGAGTTTGTTGATCGATTTGGACTCCTTGCACCTGAAGTTTTGGATGGGAGTTCTGATGAAGTGGTTGCTTGCAAGAGGCTTTTAGAGAAGGTTGGACTTAAAGGATATCAGATTGGTAAGACAAAGGTGTTTCTTAGGGCTGGTCAGATGGCTGAACTTGATGGGCTTAGGACTGAGGTCCTAGGGAGATCAGCAAGCATTATTCAGAGGAAAGTTCGTTCTTATTTGGCTCGTAGAACTTTTATATTGATTCGGAGGTCAGCTATACAACTACAATCTGCGTGTAGAGGACAACTTACTCGACAAGTATTTGAGGGCTTGAGGAGAGAAGCTTCTTCTCTAATGATTCAAAGGAATTTGCGCATGTATCTCTGTAGGAAAGCTTACCAAGAAAAGTACTCTTCAGCTGTTTCTATTCAAACTGGCATGCGTGGAATGGCTGCTCGCAATGAGCTACGCTTCAGAAGACGATCTAAAGCAGCAATTATTATCCAGAGCTACTGTCGCAGATATTTGGCTCAACTGCACTATAAGAAGTTAAAGAAAGCAGTAATCACCACCCAATGTGCATGGAGAGGAAGAGTTGCTCGTAAGGAACTACGGAAGCTGAAGATGGCTGCAAGGGAAACAGGAGCTCTCCAAGCTGCCAAGAATAAATTGGAAAAGCAGGTCGAAGAATTAACATGGAGACTACAGTTGGAGAAGCGCATGAGGGCTGACTTGGAAGAAGCTAAAACACAAGAAAATGAAAAGCTCCAATCTGCTTTGAAAGATATGCAGCTTCAATTGAAAGAAACTAAAGCAACGTTTGAGAAGGAACGCGAAGCTGCAAAGAAAGCTGCAGATATTATTCCAATTGTGAAGGAGGTTCCAGTTGTTGATAATGCAATGATTGAGAAAATTTCCAGTGAAAATGAGAAGCTCAAGGCGATGGTGAATTCACTGGAAAAGAAAATTGACGAAACACAGAAAAAATATGAAGAGGCAAACAGAGTTAGCGAAGAGAGGTTGAAGCAAGCCTCAGAGGCAGAAACAAAGATTATTCAATTAAAGACTGCAATGCAGAGGCTTGAAGAAAAATTCTCAAATATTCAATCTGAAAACCAGATTCTTCGGCAGCAAACCTTCCTGAAAACACCAGTAAAAAAGATAGCCGACCATCTTCCTATAGCAGCAGCAGAGAAATTGGAGAATGGTAACCATGTGATTGAAGATAACAGAATTGATGAGCAGGTCGTGACACCTGTGAAAACACTGAAGAGAATCAGCTCAGAATCTGAAATTAAGTTGAGTAGACCACATATTGAACATCAACAAGAGAATGTTGATGCTCTTGTCAGTTGTGTCATGAATAACATTGGGTTTAGTAATGGGAAGCCTGTAGCTGCATTTACCATTTATAAATGCCTTCTTCAGTGGAAATCTTTCGAAGCTGAAAAAACTAGTGTATTTGATCGTCTAATTCAGATGATTGGATCCGAAATTGAGAATCAAGATAACAACGATCATCTGGCTTATTGGTTATCAAACACATCTGCGCTATTATTCTTGCTTCAACGAAGCTTGAAAGCTGCTGGTGCTCCCCGAAAACCGCCACCTTCAACATCCTTATTTGGAAGGATGACTATGGGTTTCCGTTCGTCTCCTTCTTCCAACAATCTTGGATCTGCGCTTAAGGTAGTACGCCAAGTGGACGCTAAATATCCAGCTTTGCTATTCAAGCAGCAGTTGACAGCTTACGTTGAAAAAATATTCGGAATTATTCGTGATAACTTGAAGAAGGAGTTGACATCATTGCTTTCCTTGTGTATCCAAGCACCAAGGACATCGAAAGGAGTGTTACGATCTGGGAGATCGTTCGGGAAAGGTACTCCAGAAAATTACTGGCAGAGCATCATAGAAAACCTCAACTTGCTTCTCTGCACATTGAAAGAAAATTTTGTTCCGCAAATACTCATCCAGAATATCTTTGTTCAAAACTTTTCGTATATCAATGTTCAACTCTTCAATAGCCTCCTCCTTCGCCGAGAATGTTGTACATTCAGCAACGGGGAATATGTAAAATCTGGGTTAGCTGAGTTGGAGCTCTGGTGCTGCCAGGCAAAAGAGGAGTATGCTGGTGCTTCTTGGGATGAGCTTAAACACATAAGACAAGCTGTTGGATTCTTGGTTATACATCAGAAATACAGAATTTCCTATGATGAAATCACCAATGATCTTTGCCCTATCCTGAGCGTCCAGCAACTCTATAGAATATGTACGCTCTACTGGGACGACAACTATAACACTCGAAGCGTATCTCCTGATGTAATATCCAGTATGAGAGTACTGATGACTGAGGACTCCAACAATGCAGTTAGCAGTTCATTCCTGTTGGATGACAATTCCAGCATCCCCTTCTCGGTTGAAGATCTCTCGAACTCGCTGCAGGAGAAAGATTTCTCCGGTGTGAAACCCGCCGACGAATTGCTCGAGAACCCAGCCTTCCAATTTTTACACGAGTAG | 4644 | 40.89 | MASTTGLVVGSFVWLEDSEEAWIEGEVLEIRGEDIKVLCTSGKKVVVKAANVHPKDSEVPPCGVDDMTKLAYLHEPGVLHNLKLRYDINEIYTYTGNILIAVNPFTKLPHLYDSYMMAQYKGAAFGELSPHPFAVADAAYRHFTIFLLMINEKKSQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQNGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDIEKYKLGNPRTFHYLNQSNCYDLDGIDDSKEYLATRRAMEVVGISSDEQDGIFRVVAAILHLGNIEFAKGKEADSSVPKDEKSWFHLRTAAELFMCDEKALEDSLCKRVIVTRDETITKWLDPNSAALSRDALAKIVYSRLFDWLVDKINNSIGQDPDSKFLIGVLDIYGFESFKTNRCSSGMPFSWIRNKEFQALPSVSYLFLTIFKYCSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIDFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTIAHYAGDVTYQTDLFLDKNKDYVVAEHQALLTASKCYFVSCLFPPLAEESSKSSKFSSIGSRFKLQLVALLETLSATEPHYIRCVKPNNLLKPSIFENKNILQQLRCGGVMEAIRISCAGFPTRKTFDEFVDRFGLLAPEVLDGSSDEVVACKRLLEKVGLKGYQIGKTKVFLRAGQMAELDGLRTEVLGRSASIIQRKVRSYLARRTFILIRRSAIQLQSACRGQLTRQVFEGLRREASSLMIQRNLRMYLCRKAYQEKYSSAVSIQTGMRGMAARNELRFRRRSKAAIIIQSYCRRYLAQLHYKKLKKAVITTQCAWRGRVARKELRKLKMAARETGALQAAKNKLEKQVEELTWRLQLEKRMRADLEEAKTQENEKLQSALKDMQLQLKETKATFEKEREAAKKAADIIPIVKEVPVVDNAMIEKISSENEKLKAMVNSLEKKIDETQKKYEEANRVSEERLKQASEAETKIIQLKTAMQRLEEKFSNIQSENQILRQQTFLKTPVKKIADHLPIAAAEKLENGNHVIEDNRIDEQVVTPVKTLKRISSESEIKLSRPHIEHQQENVDALVSCVMNNIGFSNGKPVAAFTIYKCLLQWKSFEAEKTSVFDRLIQMIGSEIENQDNNDHLAYWLSNTSALLFLLQRSLKAAGAPRKPPPSTSLFGRMTMGFRSSPSSNNLGSALKVVRQVDAKYPALLFKQQLTAYVEKIFGIIRDNLKKELTSLLSLCIQAPRTSKGVLRSGRSFGKGTPENYWQSIIENLNLLLCTLKENFVPQILIQNIFVQNFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCCQAKEEYAGASWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVSPDVISSMRVLMTEDSNNAVSSSFLLDDNSSIPFSVEDLSNSLQEKDFSGVKPADELLENPAFQFLHE | 1547 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 253968 | 272068 | + | MC09g0025 | Mch9g0029 | 696911 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g0029 | 1547 | ProSiteProfiles | IQ motif profile. | 776 | 803 | - | - | |
| Mch9g0029 | 1547 | Pfam | Myosin N-terminal SH3-like domain | 10 | 51 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | Pfam | DIL domain | 1369 | 1473 | IPR002710 | - | |
| Mch9g0029 | 1547 | FunFam | Myosin XI D | 774 | 823 | - | - | |
| Mch9g0029 | 1547 | Gene3D | - | 872 | 921 | - | - | |
| Mch9g0029 | 1547 | Gene3D | - | 824 | 871 | - | - | |
| Mch9g0029 | 1547 | Gene3D | - | 774 | 823 | - | - | |
| Mch9g0029 | 1547 | ProSiteProfiles | IQ motif profile. | 822 | 851 | - | - | |
| Mch9g0029 | 1547 | Pfam | IQ calmodulin-binding motif | 825 | 843 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | Pfam | IQ calmodulin-binding motif | 895 | 914 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | Pfam | IQ calmodulin-binding motif | 776 | 794 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | Pfam | IQ calmodulin-binding motif | 798 | 817 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | Pfam | IQ calmodulin-binding motif | 872 | 891 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | Coils | Coil | 916 | 989 | - | - | |
| Mch9g0029 | 1547 | PANTHER | MYOSIN | 13 | 1492 | - | GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER) | |
| Mch9g0029 | 1547 | CDD | MyosinXI_CBD | 1149 | 1516 | IPR037975 | GO:0007015(InterPro) | |
| Mch9g0029 | 1547 | Gene3D | - | 445 | 662 | - | - | |
| Mch9g0029 | 1547 | ProSiteProfiles | IQ motif profile. | 870 | 899 | - | - | |
| Mch9g0029 | 1547 | ProSiteProfiles | IQ motif profile. | 845 | 874 | - | - | |
| Mch9g0029 | 1547 | SMART | iq_5 | 844 | 866 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | SMART | iq_5 | 773 | 795 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | SMART | iq_5 | 821 | 843 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | SMART | iq_5 | 796 | 818 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | SMART | iq_5 | 892 | 914 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | SMART | iq_5 | 869 | 891 | IPR000048 | GO:0005515(InterPro) | |
| Mch9g0029 | 1547 | Gene3D | Kinesin motor domain | 65 | 701 | IPR036961 | - | |
| Mch9g0029 | 1547 | PRINTS | Myosin heavy chain signature | 468 | 496 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | PRINTS | Myosin heavy chain signature | 155 | 180 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | PRINTS | Myosin heavy chain signature | 521 | 549 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | PRINTS | Myosin heavy chain signature | 202 | 229 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | PRINTS | Myosin heavy chain signature | 92 | 111 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 826 | 922 | IPR027417 | - | |
| Mch9g0029 | 1547 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 8 | 57 | IPR004009 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | FunFam | unconventional myosin-Va | 824 | 871 | - | - | |
| Mch9g0029 | 1547 | FunFam | unconventional myosin-Va | 872 | 920 | - | - | |
| Mch9g0029 | 1547 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 34 | 824 | IPR027417 | - | |
| Mch9g0029 | 1547 | ProSiteProfiles | Myosin motor domain profile. | 62 | 771 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | CDD | MYSc_Myo11 | 76 | 759 | IPR036018 | - | |
| Mch9g0029 | 1547 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 318 | 640 | - | - | |
| Mch9g0029 | 1547 | Gene3D | - | 258 | 316 | - | - | |
| Mch9g0029 | 1547 | ProSiteProfiles | IQ motif profile. | 893 | 922 | - | - | |
| Mch9g0029 | 1547 | FunFam | Myosin 2 | 318 | 430 | - | - | |
| Mch9g0029 | 1547 | ProSiteProfiles | Dilute domain profile. | 1198 | 1493 | IPR002710 | - | |
| Mch9g0029 | 1547 | Pfam | Myosin head (motor domain) | 479 | 759 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | Pfam | Myosin head (motor domain) | 64 | 450 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | SMART | DIL_2 | 1368 | 1475 | IPR002710 | - | |
| Mch9g0029 | 1547 | ProSiteProfiles | IQ motif profile. | 797 | 826 | - | - | |
| Mch9g0029 | 1547 | FunFam | Class V myosin | 478 | 620 | - | - | |
| Mch9g0029 | 1547 | Coils | Coil | 1011 | 1087 | - | - | |
| Mch9g0029 | 1547 | SMART | MYSc_2a | 57 | 772 | IPR001609 | GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro) | |
| Mch9g0029 | 1547 | Gene3D | - | 706 | 770 | - | - | |
| Mch9g0029 | 1547 | FunFam | Myosin heavy chain | 258 | 313 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch5g0146 | Mch-Chr5:957922 | Mch9g0029 | Mch-Chr9:253968 | 0 | dispersed | |
| Mch9g0029 | Mch-Chr9:253968 | Mch9g0493 | Mch-Chr9:3645648 | 0 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch9g0029 | K10357 | - | csv:101208630 | 2797.3 |