Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0064 ATGGCGATTCTGAAGCTTTTTGCTCTCTGCATTTCCTTCTTCTTATTGATTACAGCCCCCCCAGTACAAGGTGATTCCTTATATTCTCCTTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTACTGATGTTCAGCTGCTTTTGGGAAAAATCAGAGCTTCACTTGAAGGTGACACTCAAAACTTGCTTTTGTCTTCATGGAACTATTCGTTGCCTGTGTGTCAATGGAGGGGACTCAAATGGGTCTTCTCCACTGGAACTCCTCTGCTCTGCAGCGATTCTTCTTCTCCACAATGGTCTAATCTCACTCTGTTTAAAGACCCTTCTCTTCACGTTCTCTCTCTGCAGCTTCCTTCTGCTAATCTCACTGGTTCACTTCCAAAGGAGCTTGGTGAGTTCACTATGCTCCAAAGCCTCTACCTTAGCATAAACTCCTTGACTGGAACCATTCCCCTTGAACTTGGTTACAGCTCCTCTCTTTCTGACATTGATTTGAGTACCAATCTGTTGGCCGGAGCTCTTCCGCCGTCGATCTGGAATCTGTGTGAAAAACTTGCTTCTGTCAGACTTCACGGAAATTCATTATCTGGGTCTCTGCCGGAGCCTGCGTTGCCAAATTCGACCTGTAAGAATCTGGAGGCTTTGGATTTGGGCGACAACCAGATTTCAGGTACTTTCCCGGAGTTCATAACTAGATTTCAGGGTCTGAAAGTGCTTGATCTCGGGAAAAATATGTTGTCTGGACAAATCCCACAGAGTTTAGGCCAGTTAGAACTCGAGAAGTTAAACCTCTCAAACAATAACTTCAGTGGAATGTTGCCTGTTTTTGGTAACTCAAAGTTTGGCGTGGAGGCTTTCGAAGGCAACAGTCCCGGGCTTTGTGGGGTGCCTTTGAGAAGCTGTGCTGTGACTTCTCGGTTGAGTTCGGGCGCCATTGCAGGCCTTGTTATCGGCTTGATGACTGGGACGGTGGTTTTGGCTTCATTGCTGATTGGGTATATGCAAAACAAGAAGAAGAAGAGTACGAGTGAGAGTGAAGATGAGATTGAGGAAGGAGAAGATGAAGAAAATGGTGGCGGCATCGGTGGCACGGGTGGTGAGGGCAAGCTCGTTTTGTTTCAGGGTGGCGAGCATTTGACATTGGATGATGTCTTGAATGCTACAGGGCAGGTTATGGAGAAAACAAGCTATGGCACTATATATAAGGCAAAACTTGCCGACGGAGGTACCATTGCTCTAAGACTGCTGAGGGAAGGGAGCTGCAAAGACAGAAATTCTTGTTTGTCTGTGATTAAACAGTTGGGAAAGATTCGCCATGAGAACTTGATTCCATTGAGAGCTTTCTATCAGGGAAAGAGAGGAGAGAAGCTCCTCATTTATGACTATCTGCCTATCAGAACTTTATATCATTTTCTTCACGGAAAACCGGTGCTGAACTGGGCTCGGAGGCACAAGATTGCATTATGCATCGCCCGGGGACTAGCCCATCTGCACACAGGGTTTGAGGTTCCCATTACACATGGTAACGTGAGATCAAAAAACGTGCTTGTGGATGACTTCTTTGCAGCGAGGCTGACGGAGTTCGGGCTGGACAAGCTGATGATCCCATCGGTCGCAGACGAGATCGTGTCGGTAGCAAAGGCGGACGGGTACAAGGCGCCGGAGCTGCAGAGGATGAAGAAATGCAATTCGAGAACAGATGTGTATGCATTTGGAATCCTGTTGCTGGAGATACTGATAGGGAAGAAGCCA 1761 46.79 MAILKLFALCISFFLLITAPPVQGDSLYSPSPSSSSSSSSSSFSTDVQLLLGKIRASLEGDTQNLLLSSWNYSLPVCQWRGLKWVFSTGTPLLCSDSSSPQWSNLTLFKDPSLHVLSLQLPSANLTGSLPKELGEFTMLQSLYLSINSLTGTIPLELGYSSSLSDIDLSTNLLAGALPPSIWNLCEKLASVRLHGNSLSGSLPEPALPNSTCKNLEALDLGDNQISGTFPEFITRFQGLKVLDLGKNMLSGQIPQSLGQLELEKLNLSNNNFSGMLPVFGNSKFGVEAFEGNSPGLCGVPLRSCAVTSRLSSGAIAGLVIGLMTGTVVLASLLIGYMQNKKKKSTSESEDEIEEGEDEENGGGIGGTGGEGKLVLFQGGEHLTLDDVLNATGQVMEKTSYGTIYKAKLADGGTIALRLLREGSCKDRNSCLSVIKQLGKIRHENLIPLRAFYQGKRGEKLLIYDYLPIRTLYHFLHGKPVLNWARRHKIALCIARGLAHLHTGFEVPITHGNVRSKNVLVDDFFAARLTEFGLDKLMIPSVADEIVSVAKADGYKAPELQRMKKCNSRTDVYAFGILLLEILIGKKP 587
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 507326 510109 + MC09g0053 Mch9g0064 696946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0064 587 Pfam Leucine Rich Repeat 139 158 IPR001611 GO:0005515(InterPro)
Mch9g0064 587 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 46 587 IPR046959 -
Mch9g0064 587 Gene3D Ribonuclease Inhibitor 213 304 IPR032675 -
Mch9g0064 587 Gene3D Phosphorylase Kinase; domain 1 374 465 - -
Mch9g0064 587 FunFam Leucine-rich repeat receptor-like protein kinase 212 304 - -
Mch9g0064 587 MobiDBLite consensus disorder prediction 343 366 - -
Mch9g0064 587 SUPERFAMILY L domain-like 60 279 - -
Mch9g0064 587 Pfam Protein tyrosine and serine/threonine kinase 393 587 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0064 587 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 107 202 - -
Mch9g0064 587 ProSiteProfiles Protein kinase domain profile. 389 587 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0064 587 Pfam Leucine rich repeat 214 272 IPR001611 GO:0005515(InterPro)
Mch9g0064 587 SUPERFAMILY Protein kinase-like (PK-like) 394 587 IPR011009 -
Mch9g0064 587 Gene3D Transferase(Phosphotransferase) domain 1 467 587 - -
Mch9g0064 587 Gene3D Ribonuclease Inhibitor 45 209 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g2650 Mch-Chr6:28203482 Mch9g0064 Mch-Chr9:507326 1.82E-46 dispersed
Mch9g0064 Mch-Chr9:507326 Mch5g1668 Mch-Chr5:17485443 2.39E-44 dispersed
Mch9g0064 Mch-Chr9:507326 Mch9g1420 Mch-Chr9:16572272 3.82E-54 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77658 PF07714 PK_Tyr_Ser-Thr 1.70E-22 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0064 - - - 0.0