Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0079 | ATGAGTTGCTTTCCATGTTTTTCATCTCATGGGAAAGCAGCGAAAAGAACAAAGAGCGGTAGAAAGGAACAGTCTGTTTCGTTGCATTCTCGGAGTCTCAAACAACACCAACAACAACAACCTGCTGCTCCTCCCCCTCGCCCTACGCCTACAGAAAATCAAAAAGGGAACCAGCAGCAGAATGATGCAGAGAGAGAGAGAGAGAAAGAGAAAGAGGGAAGAGAGAGAGAGATTGGAGAAAAAAATAACATTGCAGCGCAGACATTCACATTCAGAGAGCTGGCCACTGCTACAAAGAATTTCCGTCAAGAGTGTCTCATTGGTGAGGGAGGGTTTGGGAGAGTTTACAAGGGCAAACTTGACAAAACCGCTCAGGTTGTAGCAGTGAAGCAGCTTGATAGAAATGGATTGCAAGGGAACAGAGAGTTTCTTGTGGAGGTTTTGATGCTAAGTCTGTTGCACCATCAAAACCTTGTCAATCTCATTGGCTATTGTGCAGATGGTGATCAAAGACTCTTGGTCTATGAGTATATGCCTTTGGGATCTTTAGAAGATCATCTACTTGACCTTCCAGCGGAGAAAAGGGCATTGGATTGGGGGACGAGGATGAAAGTAGGGTTGGGAGCAGCAAAAGGGCTGGAATATCTACACGACAAGGCCAACCCACCAGTGATATACAGAGATTTGAAGGCATCAAACATTCTTTTGGACAGCGAATTCAACGCAAAGCTGTCAGATTTCGGGCTGGCGAAGCTCGGGCCTGTCGGGGACAAGCAGCATGTTTCCTCCAGAGTTATGGGAACCTATGGATACTGTGCTCCTGAGTACCAGAGGACTGGCCAGCTTACTCTCAAGTCTGATGTCTACAGCTTTGGCGTTGTGTTGTTGGAACTCATCACTGGCAAGAGAGTCATTGACAACACTCGCCCACCTAAACAGCAGAACTTGGTGGCTTGGGCATACCCAATTTTCAAGGAACCAAGTAGATTCATGGAGTTGGCAGATCCTCTTCTAGGAGGAGAGTTCCCTGTGAGAGCACTGAACCAAGCCGTCGCCGTCGCCGCCATGTGCCTCCACGAGGAAGCATCGGCCCGGCCATTGATGAGCGACGTCGTCACTGCCCTCAGCTTCTTGGGCGCAGAGGCTGTCAACTCGTCGACCTCCTCGAGTGACATTACTTCACCACTGTCCAATCACAATCTGATTAGTCTATCCAAATCCAACGACGATGAAAAAGAAGAAATAGCAGAGGCACGCCAGCGAGCGGTAGCAGAAGCCATCGAATGGGGCTCCCACTCGAGGCAAAATGTCGCCGCTTCGCGCCCGGGAAGTTGTTCTTCCTTGTAA | 1347 | 49.15 | MSCFPCFSSHGKAAKRTKSGRKEQSVSLHSRSLKQHQQQQPAAPPPRPTPTENQKGNQQQNDAEREREKEKEGREREIGEKNNIAAQTFTFRELATATKNFRQECLIGEGGFGRVYKGKLDKTAQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPAEKRALDWGTRMKVGLGAAKGLEYLHDKANPPVIYRDLKASNILLDSEFNAKLSDFGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTLKSDVYSFGVVLLELITGKRVIDNTRPPKQQNLVAWAYPIFKEPSRFMELADPLLGGEFPVRALNQAVAVAAMCLHEEASARPLMSDVVTALSFLGAEAVNSSTSSSDITSPLSNHNLISLSKSNDDEKEEIAEARQRAVAEAIEWGSHSRQNVAASRPGSCSSL | 448 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 654417 | 659624 | + | MC09g0065 | Mch9g0079 | 696961 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0079 | 448 | ProSitePatterns | Protein kinases ATP-binding region signature. | 107 | 130 | IPR017441 | GO:0005524(InterPro) | |
Mch9g0079 | 448 | Pfam | Protein tyrosine and serine/threonine kinase | 105 | 373 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0079 | 448 | SUPERFAMILY | Protein kinase-like (PK-like) | 87 | 401 | IPR011009 | - | |
Mch9g0079 | 448 | FunFam | Serine/threonine-protein kinase PBS1 | 74 | 177 | - | - | |
Mch9g0079 | 448 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 224 | 236 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0079 | 448 | FunFam | Serine/threonine-protein kinase PBS1 | 178 | 393 | - | - | |
Mch9g0079 | 448 | SMART | serkin_6 | 101 | 378 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g0079 | 448 | MobiDBLite | consensus disorder prediction | 59 | 81 | - | - | |
Mch9g0079 | 448 | CDD | STKc_IRAK | 107 | 375 | - | - | |
Mch9g0079 | 448 | PANTHER | OS07G0668900 PROTEIN | 40 | 394 | - | - | |
Mch9g0079 | 448 | Coils | Coil | 401 | 428 | - | - | |
Mch9g0079 | 448 | Gene3D | Phosphorylase Kinase; domain 1 | 70 | 177 | - | - | |
Mch9g0079 | 448 | Gene3D | Transferase(Phosphotransferase) domain 1 | 178 | 397 | - | - | |
Mch9g0079 | 448 | MobiDBLite | consensus disorder prediction | 1 | 82 | - | - | |
Mch9g0079 | 448 | ProSiteProfiles | Protein kinase domain profile. | 101 | 378 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g1511 | Mch-Chr6:14968328 | Mch9g0079 | Mch-Chr9:654417 | 2.45E-148 | dispersed | |
Mch7g0042 | Mch-Chr7:375400 | Mch9g0079 | Mch-Chr9:654417 | 1.98E-165 | dispersed | |
Mch9g0079 | Mch-Chr9:654417 | Mch9g2164 | Mch-Chr9:22324118 | 2.57E-98 | dispersed | |
Mch9g0079 | Mch-Chr9:654417 | Mch9g1622 | Mch-Chr9:18385833 | 5.23E-164 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77659 | PF07714 | PK_Tyr_Ser-Thr | 9.40E-46 | CL0016 | Mch | PK |
Pathway information
