Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0079 ATGAGTTGCTTTCCATGTTTTTCATCTCATGGGAAAGCAGCGAAAAGAACAAAGAGCGGTAGAAAGGAACAGTCTGTTTCGTTGCATTCTCGGAGTCTCAAACAACACCAACAACAACAACCTGCTGCTCCTCCCCCTCGCCCTACGCCTACAGAAAATCAAAAAGGGAACCAGCAGCAGAATGATGCAGAGAGAGAGAGAGAGAAAGAGAAAGAGGGAAGAGAGAGAGAGATTGGAGAAAAAAATAACATTGCAGCGCAGACATTCACATTCAGAGAGCTGGCCACTGCTACAAAGAATTTCCGTCAAGAGTGTCTCATTGGTGAGGGAGGGTTTGGGAGAGTTTACAAGGGCAAACTTGACAAAACCGCTCAGGTTGTAGCAGTGAAGCAGCTTGATAGAAATGGATTGCAAGGGAACAGAGAGTTTCTTGTGGAGGTTTTGATGCTAAGTCTGTTGCACCATCAAAACCTTGTCAATCTCATTGGCTATTGTGCAGATGGTGATCAAAGACTCTTGGTCTATGAGTATATGCCTTTGGGATCTTTAGAAGATCATCTACTTGACCTTCCAGCGGAGAAAAGGGCATTGGATTGGGGGACGAGGATGAAAGTAGGGTTGGGAGCAGCAAAAGGGCTGGAATATCTACACGACAAGGCCAACCCACCAGTGATATACAGAGATTTGAAGGCATCAAACATTCTTTTGGACAGCGAATTCAACGCAAAGCTGTCAGATTTCGGGCTGGCGAAGCTCGGGCCTGTCGGGGACAAGCAGCATGTTTCCTCCAGAGTTATGGGAACCTATGGATACTGTGCTCCTGAGTACCAGAGGACTGGCCAGCTTACTCTCAAGTCTGATGTCTACAGCTTTGGCGTTGTGTTGTTGGAACTCATCACTGGCAAGAGAGTCATTGACAACACTCGCCCACCTAAACAGCAGAACTTGGTGGCTTGGGCATACCCAATTTTCAAGGAACCAAGTAGATTCATGGAGTTGGCAGATCCTCTTCTAGGAGGAGAGTTCCCTGTGAGAGCACTGAACCAAGCCGTCGCCGTCGCCGCCATGTGCCTCCACGAGGAAGCATCGGCCCGGCCATTGATGAGCGACGTCGTCACTGCCCTCAGCTTCTTGGGCGCAGAGGCTGTCAACTCGTCGACCTCCTCGAGTGACATTACTTCACCACTGTCCAATCACAATCTGATTAGTCTATCCAAATCCAACGACGATGAAAAAGAAGAAATAGCAGAGGCACGCCAGCGAGCGGTAGCAGAAGCCATCGAATGGGGCTCCCACTCGAGGCAAAATGTCGCCGCTTCGCGCCCGGGAAGTTGTTCTTCCTTGTAA 1347 49.15 MSCFPCFSSHGKAAKRTKSGRKEQSVSLHSRSLKQHQQQQPAAPPPRPTPTENQKGNQQQNDAEREREKEKEGREREIGEKNNIAAQTFTFRELATATKNFRQECLIGEGGFGRVYKGKLDKTAQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLPAEKRALDWGTRMKVGLGAAKGLEYLHDKANPPVIYRDLKASNILLDSEFNAKLSDFGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTLKSDVYSFGVVLLELITGKRVIDNTRPPKQQNLVAWAYPIFKEPSRFMELADPLLGGEFPVRALNQAVAVAAMCLHEEASARPLMSDVVTALSFLGAEAVNSSTSSSDITSPLSNHNLISLSKSNDDEKEEIAEARQRAVAEAIEWGSHSRQNVAASRPGSCSSL 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 654417 659624 + MC09g0065 Mch9g0079 696961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0079 448 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524(InterPro)
Mch9g0079 448 Pfam Protein tyrosine and serine/threonine kinase 105 373 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0079 448 SUPERFAMILY Protein kinase-like (PK-like) 87 401 IPR011009 -
Mch9g0079 448 FunFam Serine/threonine-protein kinase PBS1 74 177 - -
Mch9g0079 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0079 448 FunFam Serine/threonine-protein kinase PBS1 178 393 - -
Mch9g0079 448 SMART serkin_6 101 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0079 448 MobiDBLite consensus disorder prediction 59 81 - -
Mch9g0079 448 CDD STKc_IRAK 107 375 - -
Mch9g0079 448 PANTHER OS07G0668900 PROTEIN 40 394 - -
Mch9g0079 448 Coils Coil 401 428 - -
Mch9g0079 448 Gene3D Phosphorylase Kinase; domain 1 70 177 - -
Mch9g0079 448 Gene3D Transferase(Phosphotransferase) domain 1 178 397 - -
Mch9g0079 448 MobiDBLite consensus disorder prediction 1 82 - -
Mch9g0079 448 ProSiteProfiles Protein kinase domain profile. 101 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch6g1511 Mch-Chr6:14968328 Mch9g0079 Mch-Chr9:654417 2.45E-148 dispersed
Mch7g0042 Mch-Chr7:375400 Mch9g0079 Mch-Chr9:654417 1.98E-165 dispersed
Mch9g0079 Mch-Chr9:654417 Mch9g2164 Mch-Chr9:22324118 2.57E-98 dispersed
Mch9g0079 Mch-Chr9:654417 Mch9g1622 Mch-Chr9:18385833 5.23E-164 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77659 PF07714 PK_Tyr_Ser-Thr 9.40E-46 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0079 - - - 0.0