Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0088 CAAACAGGTTTCCTCAGCTTATCTTGTGGAGGAACTACCACCTTCATTGACTCCTCCAACATCTCATGGATTCCCGACACCGACTACATCGTTGCTGGAAACACGTCGACGGTCGACAACAGCAAAGGCAGCTCCTCCTCCAACGACCATGTTCGATTCTTCCCCGACCCCCGAGCGCGAAAATGTTACAAGCTTCCTCTGAAAAACAGCTCCTCATCAGTTCTCATCAGAGCTCAGTTTGTGTACAAAAACTATGACAAGCTTGGGAAGCCTCCAACTTTCTCTGTTTCTATTGGGACAGCCATAACTGCCACTGTGAACCTCAATTCTCATGACCCTTGGATTGAGGAGTTTGTATGGTCAGTTAACAAGGAAACTGTCTCCTTCTGTTTGCACTCCATTCCTCAGGGTGGCAGCCCTCTGATATCTTCGCTCGAACTCCGGCCGATGCCACGGGGAGCGTACGGCAACGGCTTGCTTCCGAGTCAGGCTCTTAGAAAGTCCTACCGAATCAACTGTGGTTATACTAATGGATCTCTAAGGTACCCGAGCGATCCATACGATCGGATCTGGGACCCAGACAGCAACTTCAAGCCATTCCATGTGTCATCAGAGTTCAAAGTTGAGGCAAACTTTGATTCCATGGGAGTGAAGGAAGCTCCACCAGCTGCAGTGGTTGAAACAGCCAGGGTTTTGGCGAGAAGAGATGAACTGAGCTACAACCTCCCAGTTGAAAAAGAAGAAGGAGATTACTTTGTGATTCTTTATTTTGGTGGGATTCTTGCTGTTCATCCTTCATTTGATGTTTTGGTCAATGGGAAAGTTATAGAATCAAACTACACTGTGGAAATTGGAGAGATGAGGGCTTTGTATGTCATTCAACACCAAATCAAGGGCTTCTTTAATATCACACTCAAGACTGTTAAATTCTACCCTCAAGTCAATGCCATTGAGCTCTATCAAATTCTTCATGTTCCTTTGGAAGCTTCATCAACCACAGTTTCAGCCCTTCAAGTGATTCACCAATCTACTGGTTTGGATTTGGGATGGGAAGATGATCCATGCTCTCCAAAAACTTGGGATCATGTTGGATGTGAAGGCAACCTTGTTACATCTCTGGAGCTTTCCAACATCAACTTGAGGTCCATCGGTCCGATATTTGGCGACATTCTCGATCTCAAAATATTGGATTTGCACAACACTTCACTTTCCGGGGAAATAGTAAATTTGGGCAGCCTCACTCATCTTGAAAACTTGAACCTGAGTTTCAACAAGCTAACATCCTTTGGGTCGGATTTGGACAACCTAAGCAACCTGAAAATTCTGGACTTGCAGAACAACAGTCTACAGGGAATTGTTCCGGACAGCTTGGGAGAGCTTGAAGATCTTCACCTATTGAATTTGGAGAACAATAGACTAGAAGGCACTCTCCCATTATCTTTGAACAAAGGAAATCTTGAAATCAGAACATCAGGAAACCTATGCCTATCTTTCTCCACAATGACATGCAATGATGTTTCATCAAACCCAGCCATTGAAACACCACAAGTCACAGTGGTTCCTGAGAAGAAAGAAATTAGCAGCCATAACAACAACAATCATATGCCATTCACAATCATCGTTAGTGCAGTTGCAGCAACTCTGCTAGTTCTTATCACTCTCTCTCTCTCACTTCTTCTTTACATGAGGAAACATTCTCATCACACAACTGAGCTCACATACTCAACAAAGGCAGCCATGGAGCTGAGGAACTGGAACTCTGCAAAAGTGTTCTCCTACAAGGAGATAAAGGCAGCTACAAACAACTTCAAGGAGGTGATAGGCAGAGGAAGCTTTGGATCTGTCTATCTTGGAAAGCTTCCCCAGGGAAAACTTGTGGCTGTCAAAGTAAGGTTTGACAAAACCCAACTTGGAGCGGATTCCTTTATCAACGAGGTTCATCTGTTGTCTCAAATTCGTCATCAGAATCTTGTTTGTTTGGAAGGATTTTGTAACGAATCGAAACGACAAATACTTGTTTACGAGTATTTAGCTGGTGGATCCTTGGCTGACCACATCTATGGCATGAACAGAAAAAGTGTTTCACTGAGCTGGATTAGGAGACTCAAAGTTGCTGTTGATGCAGCAAAAGGATTGGACTATTTACACAACGGAAGTGAACCAAGAATAATCCACCGTGATGTGAAGTGTAGTAACATCCTTTTGGATATGGAAATGAATGGAAAAGTTTGTGACTTTGGCCTATCCAAGCAAATACCACACCCTGATGCAACCCATGTCACTACTCTCGTCAAGGGCACTGCTGGTTATTTGGATCCCGAGTATTACTCGACTCAACAGCTAACTGAAAAGAGTGACGTGTATAGCTTTGGAGTTGTTCTATTAGAGCTGATTTGTGGACGAGAACCTCTGAGTCACACTGGAACTCCAGATTCATTCAACTTGGTGTTATGGGCAAAACCATACTTGCAGGCAGGAGCATTTGAGATAGTTGATGAGAGCATGAGGGGAATGTTTGATGTGGAAAGCATGAAAAAGACAGCTCTCATTGCTATAAGGTGTGTTGAGAGAGATGCTTCTCAAAGGCCTAATATGGCACAAGTATTGGCACAGCTTAAGGAAGCTTATGATGCACAAATTGCATATCTTTCTACTTTTGACCATTGA 2667 43.72 QTGFLSLSCGGTTTFIDSSNISWIPDTDYIVAGNTSTVDNSKGSSSSNDHVRFFPDPRARKCYKLPLKNSSSSVLIRAQFVYKNYDKLGKPPTFSVSIGTAITATVNLNSHDPWIEEFVWSVNKETVSFCLHSIPQGGSPLISSLELRPMPRGAYGNGLLPSQALRKSYRINCGYTNGSLRYPSDPYDRIWDPDSNFKPFHVSSEFKVEANFDSMGVKEAPPAAVVETARVLARRDELSYNLPVEKEEGDYFVILYFGGILAVHPSFDVLVNGKVIESNYTVEIGEMRALYVIQHQIKGFFNITLKTVKFYPQVNAIELYQILHVPLEASSTTVSALQVIHQSTGLDLGWEDDPCSPKTWDHVGCEGNLVTSLELSNINLRSIGPIFGDILDLKILDLHNTSLSGEIVNLGSLTHLENLNLSFNKLTSFGSDLDNLSNLKILDLQNNSLQGIVPDSLGELEDLHLLNLENNRLEGTLPLSLNKGNLEIRTSGNLCLSFSTMTCNDVSSNPAIETPQVTVVPEKKEISSHNNNNHMPFTIIVSAVAATLLVLITLSLSLLLYMRKHSHHTTELTYSTKAAMELRNWNSAKVFSYKEIKAATNNFKEVIGRGSFGSVYLGKLPQGKLVAVKVRFDKTQLGADSFINEVHLLSQIRHQNLVCLEGFCNESKRQILVYEYLAGGSLADHIYGMNRKSVSLSWIRRLKVAVDAAKGLDYLHNGSEPRIIHRDVKCSNILLDMEMNGKVCDFGLSKQIPHPDATHVTTLVKGTAGYLDPEYYSTQQLTEKSDVYSFGVVLLELICGREPLSHTGTPDSFNLVLWAKPYLQAGAFEIVDESMRGMFDVESMKKTALIAIRCVERDASQRPNMAQVLAQLKEAYDAQIAYLSTFDH 888
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 729073 738368 + MC09g0074 Mch9g0088 696970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0088 888 ProSitePatterns Protein kinases ATP-binding region signature. 607 629 IPR017441 GO:0005524(InterPro)
Mch9g0088 888 ProSiteProfiles Protein kinase domain profile. 601 883 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0088 888 Pfam Malectin-like domain 7 322 IPR024788 -
Mch9g0088 888 CDD STKc_IRAK 607 874 - -
Mch9g0088 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 723 735 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0088 888 PANTHER OS07G0107800 PROTEIN-RELATED 432 875 - -
Mch9g0088 888 Gene3D Ribonuclease Inhibitor 333 488 IPR032675 -
Mch9g0088 888 ProSiteProfiles Leucine-rich repeat profile. 415 437 IPR001611 GO:0005515(InterPro)
Mch9g0088 888 Gene3D Phosphorylase Kinase; domain 1 574 676 - -
Mch9g0088 888 Gene3D Transferase(Phosphotransferase) domain 1 677 884 - -
Mch9g0088 888 SMART serkin_6 601 876 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0088 888 FunFam serine/threonine-protein kinase PBS1-like 570 676 - -
Mch9g0088 888 Gene3D - 166 322 - -
Mch9g0088 888 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 677 883 - -
Mch9g0088 888 Pfam Leucine rich repeat 415 473 IPR001611 GO:0005515(InterPro)
Mch9g0088 888 SUPERFAMILY L domain-like 336 483 - -
Mch9g0088 888 SMART LRR_typ_2 436 459 IPR003591 -
Mch9g0088 888 SMART LRR_typ_2 413 435 IPR003591 -
Mch9g0088 888 Pfam Protein kinase domain 603 870 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0088 888 SUPERFAMILY Protein kinase-like (PK-like) 584 872 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0088 Mch-Chr9:729073 Mch9g2331 Mch-Chr9:23373781 7.03E-118 dispersed
Mch9g0088 Mch-Chr9:729073 Mch9g0294 Mch-Chr9:2188377 1.31E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77660 PF12819 Malectin_like 3.20E-55 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0088 - - - 0.0