Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g0154 | ATGACTTCTCGTGGTTCCTCTTCGTCCGGCAATGGCCTCTTTCCGCTCACCGTTTCCACGTCCGGCCGGCGACATGATATAGAATCCGGCATCTCCTCTACCAAAAGCATCAACGAGGAGGAGGAAGACGAGCCTGTCTCCGATCCTTTTGACATCGAGAATACCAAAAATGTCCCTCTCGCGACTCTCAAGCGGTGGAGGCAAGCTGCATTGGTGCTTAATGCATCTCGGAGATTTCGATATACTTTGGACTTAAAAAAAGAGGAAGATAAAGAACAAAGAAGGAGGATGATTAGAGCCCATGCACAAGTCATAAGAGCAGCATTGCTTTTCAAATTGGCAGGGGAACGACAAACTGGTTCAGCAGCGTCACCTCCAACGCCAACGGGTGACTATGGTGTTAGTCTAGAAAATCTTGTTTCATTGACCCGGGATCAAAAATTTTCTTCTCTACAACAATATGGAGGGGTTAAAGGCTTGTCAAATTTACTGAAAACAAATATTGAGAAAGGAATTCTGGGAGATGAAACTGATTTATTGAAAAGAACAAATGCATTTGGATCAAATACATATCCACGTAAAAAAGGGCGGAGTTTCTTGAGATTTCTTTGGGAAGCTTGGCAAGATTTAACCCTAGTCATCTTGATTGTAGCTGCAGTGGCATCATTAATTTTGGGGATTAAAACAGAGGGTATAGAGGAAGGATGGTATGATGGAGGAAGTATTGCCTTTGCAGTGTTTCTTGTGATAATAGTCACAGATGTCTTCTTATTTGCCCCTTTTCGATTAACAGCCGTCAGTGATTATCGACAGTCTCTTCAATTTCAGAACTTAAATGAGGAAAAACAGAACATACAAATAGAGATCTTGAGGGACGGTAGAACTTTAAAGGTGTCAATATTTGACCTTGTTGTTGGTGATGTTGTACCTCTTAAAATCGGAGATCAGATCCCTGCTGATGGAATATTGATCACCGGCCATTCACTTGCCATAGATGAATCTAGCATGACAGGCGAAAGCAAGATTGTTCGAAAAGATCAGAAGGCACCCTTTTTGATGTCTGGTTGTAAAGTTGCAGATGGAGTTGGTACCATGATGGTAACTGCCGTTGGAATCAATACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGGGAAGAAACTCCCCTGCAGGTGCGGTTGAATGGAGTTGCAACTTTCATAGGCATAGTTGGGCTTGCGGTTGCAGTTTCTGTGCTGGCTGTCCTTTTGGGCAGATACTTCACGGGAAATACAAGTGATGCAAATGGAAACCCTGAATTTCAGCGTGGGCATACGAGTCTAGGTGATGCTGTAGATGCAGTTATTAAAATCGTTACTGTTGCTGTTACTATTGTAGTTGTTGCAGTACCCGAAGGACTTCCTTTGGCTGTCACCCTAACATTAGCATACTCCATGAGGAAGATGATGGCCGATAAAGCATTGGTTCGTAGGCTGTCTGCTTGTGAAACTATGGGCTCTGCAACAACAATTTGCAGTGATAAGACTGGGACGTTGACTTTAAATCAGATGACTGTGGTTGATGCATGTGTTGGAAAGGAAAAGATTAATCCCCCAGATGATCCACTACAGTTGCATTCATCAGTATTGTCTCTGTTATATGAGGGCGGTGCTCAGAACAGCACCGGCAATGTTTTTGTGGCTAAGGATGGGGGAAGTATAGAGGTATCTGGATCTCCCACGGAAAAGGCTATTTTATCTTGGGCTGTCAAGCTGGGAATGAAGTTTGATGTTGTCAAATCAGAGTCCAAAGTTCTCCATGTTTTCCCTTTCAATTCAGAAAAGAAGCGAGGTGGTGTTGCAATAAAGCGGGCCAACTCAGAAGTTTACATACATTGGAAAGGAGCAGCAGAGATGGTCTTGTCTTCATGTACAAAGTATCTGGAGTTGAATGGTGAAGTGCACTCGATTGGAGACAATGAGGATTATTTTAAGGTAGCAATTAGTGATATGGCTGCAAAAAGTTTGCGTTGCGTTGCCATTGCATATAGATCTTATGAATTGGAGAAGGTTCCAATAGATGATGAGCGTTTGGATCAATGGGATTTGCCTGCTGATGATCTTGTTCTGCTTGCAATTGTTGGTATAAAGGATCCTTGTCGCCCTGGTGTTAAAGAGGCTGTGGAAGTGTGCACGGCTGCAGGTGTCAAGGTTCGCATGGTCACTGGAGACAATCTGCAGACTGCAAAGGCTATTGCACTAGAGTGTGGAATACTAACCGCAACTGAAGATGCTTTTGAGCCAACAGTCATCGAAGGAAAAGCATTCCGTGTATTGTCTGAGAAGGAAAGAGAGCAAGTTGCCAAGAAAATAACGGTGATGGGAAGGTCTTCGCCTAATGACAAGCTCTTGCTTGTTCAAGCACTGCGAAAGGACGGAGAAGTTGTTGCTGTCACTGGAGATGGGACTAATGATGCCCCAGCACTCCACGAGGTTCATATCGGTCTTTCTATGGGCATTCAGGGCACTGAAGTTGCAAAAGAAAGTTCGGATATTGTTATCTTGGATGATAACTTTGCTTCAGTTGTAAAGGTTGTGAGGTGGGGACGTTCTGTGTATGCAAACATTCAAAAGTTCATCCAGTTTCAGCTCACTGTAAATGTTGCTGCTCTTGTGATTAATGTCGTTGCAGCTGTGTCTTCGGGTGAAGTTCCTTTAAATACCGTGCAGCTTCTCTGGGTTAACCTTATCATGGATACACTTGGTGCACTAGCACTGGCTACTGAACCACCAACAGACCACCTGATGCATCGATCACCAGTTGGGCGAAGGGAGCCCCTCGTAACTAATATAATGTGGAGGAACTTGATCGTACAGGCTTTGTATCAAGTTGGTGTACTTCTTGTTGTCAACTTCCATGGCACTGATATTCTCAAATTGAATAGTGAGAGCAAGGAGGACGCCTTTGAAGTCAAGAATACAGTGGTTTTCAATGCATTTGTCCTCTGTCAGATATTCAACGAATTTAATGCTCGAAAACCCGATGAAATAAACGTGTTCAGTGGAGTGACCAAAAATTACCTCTTTATGAGCATAGTTGGAACAACATTCGTGCTTCAGATTATCATCATCGAATTTCTTGGAAAGTTTACTTCCACAGTAAAACTCGATTGGCAGCAATGGCTTATCTGCTTAGTCATCGCCCTTGTCAGTTGGCCACTGGCGATTGTTGGCAAACTTATTCCAGTTCCGGACACCCCATTGGCTAAATACTTCACAAAGTCAGTTCAATGA | 3282 | 43.51 | MTSRGSSSSGNGLFPLTVSTSGRRHDIESGISSTKSINEEEEDEPVSDPFDIENTKNVPLATLKRWRQAALVLNASRRFRYTLDLKKEEDKEQRRRMIRAHAQVIRAALLFKLAGERQTGSAASPPTPTGDYGVSLENLVSLTRDQKFSSLQQYGGVKGLSNLLKTNIEKGILGDETDLLKRTNAFGSNTYPRKKGRSFLRFLWEAWQDLTLVILIVAAVASLILGIKTEGIEEGWYDGGSIAFAVFLVIIVTDVFLFAPFRLTAVSDYRQSLQFQNLNEEKQNIQIEILRDGRTLKVSIFDLVVGDVVPLKIGDQIPADGILITGHSLAIDESSMTGESKIVRKDQKAPFLMSGCKVADGVGTMMVTAVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLAVAVSVLAVLLGRYFTGNTSDANGNPEFQRGHTSLGDAVDAVIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVDACVGKEKINPPDDPLQLHSSVLSLLYEGGAQNSTGNVFVAKDGGSIEVSGSPTEKAILSWAVKLGMKFDVVKSESKVLHVFPFNSEKKRGGVAIKRANSEVYIHWKGAAEMVLSSCTKYLELNGEVHSIGDNEDYFKVAISDMAAKSLRCVAIAYRSYELEKVPIDDERLDQWDLPADDLVLLAIVGIKDPCRPGVKEAVEVCTAAGVKVRMVTGDNLQTAKAIALECGILTATEDAFEPTVIEGKAFRVLSEKEREQVAKKITVMGRSSPNDKLLLVQALRKDGEVVAVTGDGTNDAPALHEVHIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGEVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLVTNIMWRNLIVQALYQVGVLLVVNFHGTDILKLNSESKEDAFEVKNTVVFNAFVLCQIFNEFNARKPDEINVFSGVTKNYLFMSIVGTTFVLQIIIIEFLGKFTSTVKLDWQQWLICLVIALVSWPLAIVGKLIPVPDTPLAKYFTKSVQ | 1093 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1193848 | 1208102 | + | MC09g0130 | Mch9g0154 | 697036 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g0154 | 1093 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Mch9g0154 | 1093 | FunFam | Calcium-transporting ATPase | 261 | 384 | - | - | |
| Mch9g0154 | 1093 | FunFam | Calcium-transporting ATPase | 518 | 715 | - | - | |
| Mch9g0154 | 1093 | Pfam | Cation transporter/ATPase, N-terminus | 154 | 222 | IPR004014 | - | |
| Mch9g0154 | 1093 | Pfam | E1-E2 ATPase | 286 | 486 | - | - | |
| Mch9g0154 | 1093 | SFLD | C1.7: P-type atpase like | 490 | 867 | - | - | |
| Mch9g0154 | 1093 | Gene3D | - | 505 | 860 | IPR023214 | - | |
| Mch9g0154 | 1093 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 514 | 720 | IPR023299 | GO:0000166(InterPro) | |
| Mch9g0154 | 1093 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
| Mch9g0154 | 1093 | FunFam | Calcium-transporting ATPase | 708 | 860 | - | - | |
| Mch9g0154 | 1093 | Pfam | Cation transporting ATPase, C-terminus | 900 | 1077 | IPR006068 | - | |
| Mch9g0154 | 1093 | FunFam | Calcium-transporting ATPase | 58 | 114 | - | - | |
| Mch9g0154 | 1093 | SMART | Cation_ATPase_N_a_2 | 153 | 227 | IPR004014 | - | |
| Mch9g0154 | 1093 | SFLD | p-type atpase | 490 | 867 | IPR044492 | - | |
| Mch9g0154 | 1093 | Gene3D | - | 178 | 384 | - | - | |
| Mch9g0154 | 1093 | Gene3D | - | 60 | 113 | - | - | |
| Mch9g0154 | 1093 | PANTHER | CATION TRANSPORTING ATPASE | 113 | 1079 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
| Mch9g0154 | 1093 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 510 | 516 | IPR018303 | - | |
| Mch9g0154 | 1093 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 362 | 532 | - | - | |
| Mch9g0154 | 1093 | Pfam | haloacid dehalogenase-like hydrolase | 506 | 828 | - | - | |
| Mch9g0154 | 1093 | SUPERFAMILY | HAD-like | 506 | 920 | IPR036412 | - | |
| Mch9g0154 | 1093 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 144 | 1079 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
| Mch9g0154 | 1093 | Gene3D | - | 205 | 1068 | - | - | |
| Mch9g0154 | 1093 | SUPERFAMILY | Calcium ATPase, transduction domain A | 286 | 381 | IPR008250 | - | |
| Mch9g0154 | 1093 | CDD | P-type_ATPase_Ca_PMCA-like | 179 | 948 | - | - | |
| Mch9g0154 | 1093 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 48 | 89 | IPR024750 | GO:0005516(InterPro) | |
| Mch9g0154 | 1093 | NCBIfam | HAD-IC family P-type ATPase | 449 | 533 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Mch9g0154 | 1093 | NCBIfam | HAD-IC family P-type ATPase | 781 | 895 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Mch9g0154 | 1093 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 154 | 1079 | IPR023298 | - | |
| Mch9g0154 | 1093 | FunFam | Calcium-transporting ATPase | 832 | 1081 | - | - | |
| Mch9g0154 | 1093 | Gene3D | - | 518 | 715 | IPR023299 | GO:0000166(InterPro) | |
| Mch9g0154 | 1093 | PRINTS | P-type cation-transporting ATPase superfamily signature | 508 | 522 | - | - | |
| Mch9g0154 | 1093 | PRINTS | P-type cation-transporting ATPase superfamily signature | 815 | 834 | - | - | |
| Mch9g0154 | 1093 | PRINTS | P-type cation-transporting ATPase superfamily signature | 730 | 740 | - | - | |
| Mch9g0154 | 1093 | PRINTS | P-type cation-transporting ATPase superfamily signature | 332 | 346 | - | - | |
| Mch9g0154 | 1093 | PRINTS | P-type cation-transporting ATPase superfamily signature | 839 | 851 | - | - | |
| Mch9g0154 | 1093 | PRINTS | P-type cation-transporting ATPase superfamily signature | 708 | 719 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch8g2603 | Mch-Chr8:29182114 | Mch9g0154 | Mch-Chr9:1193848 | 0 | dispersed | |
| Mch8g2937 | Mch-Chr8:32100329 | Mch9g0154 | Mch-Chr9:1193848 | 0 | dispersed | |
| Mch8g3015 | Mch-Chr8:32754980 | Mch9g0154 | Mch-Chr9:1193848 | 1.18E-46 | dispersed | |
| Mch9g0154 | Mch-Chr9:1193848 | Mch10g0339 | Mch-Chr10:2250213 | 5.36E-06 | dispersed | |
| Mch9g0154 | Mch-Chr9:1193848 | Mch9g0907 | Mch-Chr9:7172631 | 0 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch9g0154 | K01537 | - | csv:101214801 | 1841.62 |