Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0154 ATGACTTCTCGTGGTTCCTCTTCGTCCGGCAATGGCCTCTTTCCGCTCACCGTTTCCACGTCCGGCCGGCGACATGATATAGAATCCGGCATCTCCTCTACCAAAAGCATCAACGAGGAGGAGGAAGACGAGCCTGTCTCCGATCCTTTTGACATCGAGAATACCAAAAATGTCCCTCTCGCGACTCTCAAGCGGTGGAGGCAAGCTGCATTGGTGCTTAATGCATCTCGGAGATTTCGATATACTTTGGACTTAAAAAAAGAGGAAGATAAAGAACAAAGAAGGAGGATGATTAGAGCCCATGCACAAGTCATAAGAGCAGCATTGCTTTTCAAATTGGCAGGGGAACGACAAACTGGTTCAGCAGCGTCACCTCCAACGCCAACGGGTGACTATGGTGTTAGTCTAGAAAATCTTGTTTCATTGACCCGGGATCAAAAATTTTCTTCTCTACAACAATATGGAGGGGTTAAAGGCTTGTCAAATTTACTGAAAACAAATATTGAGAAAGGAATTCTGGGAGATGAAACTGATTTATTGAAAAGAACAAATGCATTTGGATCAAATACATATCCACGTAAAAAAGGGCGGAGTTTCTTGAGATTTCTTTGGGAAGCTTGGCAAGATTTAACCCTAGTCATCTTGATTGTAGCTGCAGTGGCATCATTAATTTTGGGGATTAAAACAGAGGGTATAGAGGAAGGATGGTATGATGGAGGAAGTATTGCCTTTGCAGTGTTTCTTGTGATAATAGTCACAGATGTCTTCTTATTTGCCCCTTTTCGATTAACAGCCGTCAGTGATTATCGACAGTCTCTTCAATTTCAGAACTTAAATGAGGAAAAACAGAACATACAAATAGAGATCTTGAGGGACGGTAGAACTTTAAAGGTGTCAATATTTGACCTTGTTGTTGGTGATGTTGTACCTCTTAAAATCGGAGATCAGATCCCTGCTGATGGAATATTGATCACCGGCCATTCACTTGCCATAGATGAATCTAGCATGACAGGCGAAAGCAAGATTGTTCGAAAAGATCAGAAGGCACCCTTTTTGATGTCTGGTTGTAAAGTTGCAGATGGAGTTGGTACCATGATGGTAACTGCCGTTGGAATCAATACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGATACTGGGGAAGAAACTCCCCTGCAGGTGCGGTTGAATGGAGTTGCAACTTTCATAGGCATAGTTGGGCTTGCGGTTGCAGTTTCTGTGCTGGCTGTCCTTTTGGGCAGATACTTCACGGGAAATACAAGTGATGCAAATGGAAACCCTGAATTTCAGCGTGGGCATACGAGTCTAGGTGATGCTGTAGATGCAGTTATTAAAATCGTTACTGTTGCTGTTACTATTGTAGTTGTTGCAGTACCCGAAGGACTTCCTTTGGCTGTCACCCTAACATTAGCATACTCCATGAGGAAGATGATGGCCGATAAAGCATTGGTTCGTAGGCTGTCTGCTTGTGAAACTATGGGCTCTGCAACAACAATTTGCAGTGATAAGACTGGGACGTTGACTTTAAATCAGATGACTGTGGTTGATGCATGTGTTGGAAAGGAAAAGATTAATCCCCCAGATGATCCACTACAGTTGCATTCATCAGTATTGTCTCTGTTATATGAGGGCGGTGCTCAGAACAGCACCGGCAATGTTTTTGTGGCTAAGGATGGGGGAAGTATAGAGGTATCTGGATCTCCCACGGAAAAGGCTATTTTATCTTGGGCTGTCAAGCTGGGAATGAAGTTTGATGTTGTCAAATCAGAGTCCAAAGTTCTCCATGTTTTCCCTTTCAATTCAGAAAAGAAGCGAGGTGGTGTTGCAATAAAGCGGGCCAACTCAGAAGTTTACATACATTGGAAAGGAGCAGCAGAGATGGTCTTGTCTTCATGTACAAAGTATCTGGAGTTGAATGGTGAAGTGCACTCGATTGGAGACAATGAGGATTATTTTAAGGTAGCAATTAGTGATATGGCTGCAAAAAGTTTGCGTTGCGTTGCCATTGCATATAGATCTTATGAATTGGAGAAGGTTCCAATAGATGATGAGCGTTTGGATCAATGGGATTTGCCTGCTGATGATCTTGTTCTGCTTGCAATTGTTGGTATAAAGGATCCTTGTCGCCCTGGTGTTAAAGAGGCTGTGGAAGTGTGCACGGCTGCAGGTGTCAAGGTTCGCATGGTCACTGGAGACAATCTGCAGACTGCAAAGGCTATTGCACTAGAGTGTGGAATACTAACCGCAACTGAAGATGCTTTTGAGCCAACAGTCATCGAAGGAAAAGCATTCCGTGTATTGTCTGAGAAGGAAAGAGAGCAAGTTGCCAAGAAAATAACGGTGATGGGAAGGTCTTCGCCTAATGACAAGCTCTTGCTTGTTCAAGCACTGCGAAAGGACGGAGAAGTTGTTGCTGTCACTGGAGATGGGACTAATGATGCCCCAGCACTCCACGAGGTTCATATCGGTCTTTCTATGGGCATTCAGGGCACTGAAGTTGCAAAAGAAAGTTCGGATATTGTTATCTTGGATGATAACTTTGCTTCAGTTGTAAAGGTTGTGAGGTGGGGACGTTCTGTGTATGCAAACATTCAAAAGTTCATCCAGTTTCAGCTCACTGTAAATGTTGCTGCTCTTGTGATTAATGTCGTTGCAGCTGTGTCTTCGGGTGAAGTTCCTTTAAATACCGTGCAGCTTCTCTGGGTTAACCTTATCATGGATACACTTGGTGCACTAGCACTGGCTACTGAACCACCAACAGACCACCTGATGCATCGATCACCAGTTGGGCGAAGGGAGCCCCTCGTAACTAATATAATGTGGAGGAACTTGATCGTACAGGCTTTGTATCAAGTTGGTGTACTTCTTGTTGTCAACTTCCATGGCACTGATATTCTCAAATTGAATAGTGAGAGCAAGGAGGACGCCTTTGAAGTCAAGAATACAGTGGTTTTCAATGCATTTGTCCTCTGTCAGATATTCAACGAATTTAATGCTCGAAAACCCGATGAAATAAACGTGTTCAGTGGAGTGACCAAAAATTACCTCTTTATGAGCATAGTTGGAACAACATTCGTGCTTCAGATTATCATCATCGAATTTCTTGGAAAGTTTACTTCCACAGTAAAACTCGATTGGCAGCAATGGCTTATCTGCTTAGTCATCGCCCTTGTCAGTTGGCCACTGGCGATTGTTGGCAAACTTATTCCAGTTCCGGACACCCCATTGGCTAAATACTTCACAAAGTCAGTTCAATGA 3282 43.51 MTSRGSSSSGNGLFPLTVSTSGRRHDIESGISSTKSINEEEEDEPVSDPFDIENTKNVPLATLKRWRQAALVLNASRRFRYTLDLKKEEDKEQRRRMIRAHAQVIRAALLFKLAGERQTGSAASPPTPTGDYGVSLENLVSLTRDQKFSSLQQYGGVKGLSNLLKTNIEKGILGDETDLLKRTNAFGSNTYPRKKGRSFLRFLWEAWQDLTLVILIVAAVASLILGIKTEGIEEGWYDGGSIAFAVFLVIIVTDVFLFAPFRLTAVSDYRQSLQFQNLNEEKQNIQIEILRDGRTLKVSIFDLVVGDVVPLKIGDQIPADGILITGHSLAIDESSMTGESKIVRKDQKAPFLMSGCKVADGVGTMMVTAVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLAVAVSVLAVLLGRYFTGNTSDANGNPEFQRGHTSLGDAVDAVIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVDACVGKEKINPPDDPLQLHSSVLSLLYEGGAQNSTGNVFVAKDGGSIEVSGSPTEKAILSWAVKLGMKFDVVKSESKVLHVFPFNSEKKRGGVAIKRANSEVYIHWKGAAEMVLSSCTKYLELNGEVHSIGDNEDYFKVAISDMAAKSLRCVAIAYRSYELEKVPIDDERLDQWDLPADDLVLLAIVGIKDPCRPGVKEAVEVCTAAGVKVRMVTGDNLQTAKAIALECGILTATEDAFEPTVIEGKAFRVLSEKEREQVAKKITVMGRSSPNDKLLLVQALRKDGEVVAVTGDGTNDAPALHEVHIGLSMGIQGTEVAKESSDIVILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGEVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLVTNIMWRNLIVQALYQVGVLLVVNFHGTDILKLNSESKEDAFEVKNTVVFNAFVLCQIFNEFNARKPDEINVFSGVTKNYLFMSIVGTTFVLQIIIIEFLGKFTSTVKLDWQQWLICLVIALVSWPLAIVGKLIPVPDTPLAKYFTKSVQ 1093
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 1193848 1208102 + MC09g0130 Mch9g0154 697036
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0154 1093 MobiDBLite consensus disorder prediction 1 53 - -
Mch9g0154 1093 FunFam Calcium-transporting ATPase 261 384 - -
Mch9g0154 1093 FunFam Calcium-transporting ATPase 518 715 - -
Mch9g0154 1093 Pfam Cation transporter/ATPase, N-terminus 154 222 IPR004014 -
Mch9g0154 1093 Pfam E1-E2 ATPase 286 486 - -
Mch9g0154 1093 SFLD C1.7: P-type atpase like 490 867 - -
Mch9g0154 1093 Gene3D - 505 860 IPR023214 -
Mch9g0154 1093 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 514 720 IPR023299 GO:0000166(InterPro)
Mch9g0154 1093 MobiDBLite consensus disorder prediction 1 34 - -
Mch9g0154 1093 FunFam Calcium-transporting ATPase 708 860 - -
Mch9g0154 1093 Pfam Cation transporting ATPase, C-terminus 900 1077 IPR006068 -
Mch9g0154 1093 FunFam Calcium-transporting ATPase 58 114 - -
Mch9g0154 1093 SMART Cation_ATPase_N_a_2 153 227 IPR004014 -
Mch9g0154 1093 SFLD p-type atpase 490 867 IPR044492 -
Mch9g0154 1093 Gene3D - 178 384 - -
Mch9g0154 1093 Gene3D - 60 113 - -
Mch9g0154 1093 PANTHER CATION TRANSPORTING ATPASE 113 1079 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Mch9g0154 1093 ProSitePatterns E1-E2 ATPases phosphorylation site. 510 516 IPR018303 -
Mch9g0154 1093 FunFam Calcium-transporting ATPase 9 plasma membrane-type 362 532 - -
Mch9g0154 1093 Pfam haloacid dehalogenase-like hydrolase 506 828 - -
Mch9g0154 1093 SUPERFAMILY HAD-like 506 920 IPR036412 -
Mch9g0154 1093 NCBIfam calcium-translocating P-type ATPase, PMCA-type 144 1079 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Mch9g0154 1093 Gene3D - 205 1068 - -
Mch9g0154 1093 SUPERFAMILY Calcium ATPase, transduction domain A 286 381 IPR008250 -
Mch9g0154 1093 CDD P-type_ATPase_Ca_PMCA-like 179 948 - -
Mch9g0154 1093 Pfam Ca2+-ATPase N terminal autoinhibitory domain 48 89 IPR024750 GO:0005516(InterPro)
Mch9g0154 1093 NCBIfam HAD-IC family P-type ATPase 449 533 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch9g0154 1093 NCBIfam HAD-IC family P-type ATPase 781 895 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch9g0154 1093 SUPERFAMILY Calcium ATPase, transmembrane domain M 154 1079 IPR023298 -
Mch9g0154 1093 FunFam Calcium-transporting ATPase 832 1081 - -
Mch9g0154 1093 Gene3D - 518 715 IPR023299 GO:0000166(InterPro)
Mch9g0154 1093 PRINTS P-type cation-transporting ATPase superfamily signature 508 522 - -
Mch9g0154 1093 PRINTS P-type cation-transporting ATPase superfamily signature 815 834 - -
Mch9g0154 1093 PRINTS P-type cation-transporting ATPase superfamily signature 730 740 - -
Mch9g0154 1093 PRINTS P-type cation-transporting ATPase superfamily signature 332 346 - -
Mch9g0154 1093 PRINTS P-type cation-transporting ATPase superfamily signature 839 851 - -
Mch9g0154 1093 PRINTS P-type cation-transporting ATPase superfamily signature 708 719 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2603 Mch-Chr8:29182114 Mch9g0154 Mch-Chr9:1193848 0 dispersed
Mch8g2937 Mch-Chr8:32100329 Mch9g0154 Mch-Chr9:1193848 0 dispersed
Mch8g3015 Mch-Chr8:32754980 Mch9g0154 Mch-Chr9:1193848 1.18E-46 dispersed
Mch9g0154 Mch-Chr9:1193848 Mch10g0339 Mch-Chr10:2250213 5.36E-06 dispersed
Mch9g0154 Mch-Chr9:1193848 Mch9g0907 Mch-Chr9:7172631 0 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0154 K01537 - csv:101214801 1841.62