Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0166 ATGAATTGGAGGTGGACGGAGCTGGTATTTCTCATCATTCTTTGCATTCTGGGATTGAAGCCCAGCTTCATCAATGGAGCCACAGATCCAGCAGATGCCTCTGCTTTAAGAGTTTTGTACACCAGCTTAAACTCCCCGTCTCAGCTAACCCAGTGGAACGCAAATGGCGATGATCCATGTGGACAATCATGGAAGGGGGTTACTTGCTCTGGCTCACGGGTTACAGAAATAAACTTATCTGGCCTCGGGCTCAGTGGATCGCTCGGATACCAGCTCTCAAGTTTGACATCGTTAACCAATCTAGATGTGAGCAATAACAATATTGGGGGCGAGATAGTCTACCAACTTCCACCAAACCTGCATAGATTAAATCTTGCTCGTAACAACTTCAATAAAGGCATCCCTTATTCGGTCTCCTTGATGACTACACTTCAATACTTAAATATCAGTCACAATCAGCTTCAGGATCCACTGATTGATATGTTTGGGCAGCTTACTTCCCTCTCCACATTGGATCTGTCTTTCAATTCTCTGTCTGGCAACCTACCTCAGAGTTTTAGCTCCCTTTCTGGCATCAGCACCATGTATTTGCAAAATAACCAGTTCACTGGAACAATCGATGTCCTTGCAAATCTTCCTCTTGACAACCTGAATGTTGAGAATAACCATTTCACTGGCTGGATCCCCGAACTACTGAAGAACATCAATCTGCAGACAAATGGGAACTCCTTCAGCTCAGGTCCTGCACCTCCTCCTCCACCTGGTACGCCTCCAGCCACCAGAAGGAACCGAAATCGAAATTCTGGTAGCAATAGTCCATCAAATGGTGGTTCTGGTGAAGGCGAGAAATCAGGAATTAGTGGTGGTGGCATTGCAGGAATTATCATCTCTGTGCTTGTCGTTGGAGCTATAGTAGCATTCTTCCTTGTAAGGAGGAAATCAAAGAGATCATCTACAGACATTGAAAAGCTTGATAACCAACCCCTGCAACCTCTTAAAATGAACGCAGCACAAGAAACGAAGTCGGAAGAGACCTCCTCCACACTTTTTCCAACAACATTTGACACTTCTGCTGCAATTAATCTTAAGCCCCCACCTATTGATCGTCATAAATCATTTGATGAAGACGATTTCTCGAAACGAGCCGTTGTCAAGAAGGCTAGTGCAGCTCCTATCAATGTAAAGTCATATTCAATAGCAGACCTGCAAATGGCTACAGGCAGCTTCAATGTTGAAAATCTTCTTGGTGAAGGATCGTTTGGACGTGTTTATCGGGCTGAGTTTGATGACGGGAAGATTCTTGCCGTGAAAAAAATAAACTCGTCTGCACTACCTAGGGAATTATCTGAAGATTTCACTGAGATTGTTTCAAAAGTCTCCCAGTTACACCATCCCAATATAACTGAGCTTGTGGGCTATTGCTCAGAGCATGGGCAGCATTTGCTTGTGTATGAGTTCCAAAAAAATGGCTCGCTTTATGACTTCTTGCATCTATCAGATGAATACAACAAGCCATTGATATGGAATTCCCGTGTTAAGATTGCTCTGGGAACAGCACGTGCATTAGAGTATCTTCATGAAGTTTGCTCCCCATCACTTGTTCATAGAAACATCAAGTCTGCTAACATATTGCTGGATGCCGAACTCAGCCCCCACCTTTCTGATTCTGGACTGGAAAGCTTTGTGCCAAATGAAGATCAGGCACTGGATCACAATGCAAGGTCAGGATACACTGCCCCTGAGGTTACCATGTCTGGCCAGTATACTCTGAAAAGCGATGTTTACAGTTTCGGAGTAGTCATGTTGGAGCTGCTGACTGGACGCAAACCATTCGATAGTTCAAGGGCGAGGTCGGAGCAGTCTTTGGTTCGATGGGCGACACCCCAGCTTCATGACATCGATGCTTTGGCCAAAATGGTTGATCCAGAACTCAAAGGGCTGTATCCAGTTAAATCTCTCTCCCGATTTGCGGATGTGATTGCACTTTGCGTTCAGACCGAACCAGAATTCAGACCTCCAATGTCGGAGGTGGTGGAAGCATTGGTTCGTCTGGTGCAGCGAGCAAACATGAGTAAGAGAACATTTGGAAATGAGAATGTATCGTCTCCGAGAGCGGACAGCACAGGTGGGGAGGACACGCCA 2142 45.42 MNWRWTELVFLIILCILGLKPSFINGATDPADASALRVLYTSLNSPSQLTQWNANGDDPCGQSWKGVTCSGSRVTEINLSGLGLSGSLGYQLSSLTSLTNLDVSNNNIGGEIVYQLPPNLHRLNLARNNFNKGIPYSVSLMTTLQYLNISHNQLQDPLIDMFGQLTSLSTLDLSFNSLSGNLPQSFSSLSGISTMYLQNNQFTGTIDVLANLPLDNLNVENNHFTGWIPELLKNINLQTNGNSFSSGPAPPPPPGTPPATRRNRNRNSGSNSPSNGGSGEGEKSGISGGGIAGIIISVLVVGAIVAFFLVRRKSKRSSTDIEKLDNQPLQPLKMNAAQETKSEETSSTLFPTTFDTSAAINLKPPPIDRHKSFDEDDFSKRAVVKKASAAPINVKSYSIADLQMATGSFNVENLLGEGSFGRVYRAEFDDGKILAVKKINSSALPRELSEDFTEIVSKVSQLHHPNITELVGYCSEHGQHLLVYEFQKNGSLYDFLHLSDEYNKPLIWNSRVKIALGTARALEYLHEVCSPSLVHRNIKSANILLDAELSPHLSDSGLESFVPNEDQALDHNARSGYTAPEVTMSGQYTLKSDVYSFGVVMLELLTGRKPFDSSRARSEQSLVRWATPQLHDIDALAKMVDPELKGLYPVKSLSRFADVIALCVQTEPEFRPPMSEVVEALVRLVQRANMSKRTFGNENVSSPRADSTGGEDTP 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1268020 1273763 + MC09g0140 Mch9g0166 697048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0166 714 MobiDBLite consensus disorder prediction 260 281 - -
Mch9g0166 714 MobiDBLite consensus disorder prediction 239 284 - -
Mch9g0166 714 Pfam Leucine Rich repeat 95 113 IPR001611 GO:0005515(InterPro)
Mch9g0166 714 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 255 - -
Mch9g0166 714 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 161 686 IPR046959 -
Mch9g0166 714 CDD STKc_IRAK 415 684 - -
Mch9g0166 714 Gene3D Phosphorylase Kinase; domain 1 372 486 - -
Mch9g0166 714 SUPERFAMILY L domain-like 29 234 - -
Mch9g0166 714 Gene3D Transferase(Phosphotransferase) domain 1 488 704 - -
Mch9g0166 714 ProSiteProfiles Protein kinase domain profile. 409 684 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0166 714 Gene3D Ribonuclease Inhibitor 29 257 IPR032675 -
Mch9g0166 714 ProSitePatterns Protein kinases ATP-binding region signature. 415 438 IPR017441 GO:0005524(InterPro)
Mch9g0166 714 MobiDBLite consensus disorder prediction 694 714 - -
Mch9g0166 714 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 487 695 - -
Mch9g0166 714 SUPERFAMILY Protein kinase-like (PK-like) 391 681 IPR011009 -
Mch9g0166 714 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Mch9g0166 714 Pfam Leucine rich repeat 143 202 IPR001611 GO:0005515(InterPro)
Mch9g0166 714 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 374 486 - -
Mch9g0166 714 Pfam Protein tyrosine and serine/threonine kinase 411 681 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch3g0804 Mch-Chr3:12118111 Mch9g0166 Mch-Chr9:1268020 2.30E-164 dispersed
Mch4g1111 Mch-Chr4:11072431 Mch9g0166 Mch-Chr9:1268020 2.63E-167 dispersed
Mch9g0166 Mch-Chr9:1268020 Mch11g0054 Mch-Chr11:338613 5.14E-78 dispersed
Mch8g1013 Mch-Chr8:7183135 Mch9g0166 Mch-Chr9:1268020 1.09E-274 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77661 PF07714 PK_Tyr_Ser-Thr 5.40E-44 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0166 - - - 0.0