Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0216 CTTTCAAACTCCTGTAATGGTTCACACCTTCAAATTTTCACCTTCAAAGAACTTGAAGAAATCACTCAGAACTTCACCAAAGGCAACTATTTGGGGGAGGGGGGATTTGGGCCTGTTTTTAAAGGGTTTATTGAAGGGAATTTCAAGCCTGGGTTGAAGCCACAGCAAGTGGCTGTGAAGATTTTGGACTTGGATGGCTCTCAAGGCCATAGGGAGTGGCTGGCTGAAGTGTTCTTTCTTGGGCAATTGAGACACCAAAATCTTGTTAATTTGATTGGGTATTGCCTTGAAGATGAGCAGAGGCTTCTTGTTTATGAGTACATGGAAGGTGGGAACTTGGAGAATCTGTTGTTTAAAGGCTGTTATGTTTCAAATTTGACATGGTTACAAAGGATGAAGATTGCATTAGGATCAGCAAAAGGCCTTGCTTTCCTCCACGAAGCCGAAAAACCGATCATTTTTCGAGATTTCAAGGCTTCAAACATCTTACTAGACTCGGACTACAATCCGAAGCTTTCGGATTTCGGGCTGGCCATCGACTGTCCCGAAGGAGACGAGTCGCACATCACGACCCGAATCATGGGGACCGAAGGCTATGCAGCGCCAGAATACATCATGACAGGTCATTTGTCAACAATGAGTGATGTATTCAGCTTTGGGGTGTTTCTGTTAGAGCTACTAACGGGTCGACGAGCAGTCGACAAGAGTCGACCGAGCCGAGAGCAGAACTTGGTGGTTTGGGGAAGGCATCTGTTGAAAGATCACCACAAACTTGAGAAGATAATTGATCCAAGGCTTGAGGGGCAGTACTCAAATGAAGGAGCTAAAAAAGTGGCTGCAATAGCTTACCAATGCCTTAGCCACCACCCCAAATGCAGGCCCACAATGAACTCTGTGGTGAAGGATTTGGAGGCTGTGATTGACATGAAAGAGTTTCTAAGTGAGCCATTTGTGTACATTGCCCCAAGTGAAGACACCAAAAGGGAAGATGAAGTAGAGAAGAAGACGAACAAGGATGTGGTGGTGGAGGAGACGAAGCCGAAGAGCCACCAATCGGAGCGAAAAGGTCATAGGTATCGAGTTTCATTGTCGAGATCGAGATCTGGTGCTGTTCATTCTGATACAGATTTGTACAAGAATCTTGGAAGCAGTTTTTACCCTCCAAAACAAGCTGCTGCTGTTGCTGCTTTGGTGAAAAGCACTTGA 1206 45.52 LSNSCNGSHLQIFTFKELEEITQNFTKGNYLGEGGFGPVFKGFIEGNFKPGLKPQQVAVKILDLDGSQGHREWLAEVFFLGQLRHQNLVNLIGYCLEDEQRLLVYEYMEGGNLENLLFKGCYVSNLTWLQRMKIALGSAKGLAFLHEAEKPIIFRDFKASNILLDSDYNPKLSDFGLAIDCPEGDESHITTRIMGTEGYAAPEYIMTGHLSTMSDVFSFGVFLLELLTGRRAVDKSRPSREQNLVVWGRHLLKDHHKLEKIIDPRLEGQYSNEGAKKVAAIAYQCLSHHPKCRPTMNSVVKDLEAVIDMKEFLSEPFVYIAPSEDTKREDEVEKKTNKDVVVEETKPKSHQSERKGHRYRVSLSRSRSGAVHSDTDLYKNLGSSFYPPKQAAAVAALVKST 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1630856 1632684 - MC09g0183 Mch9g0216 697098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0216 401 ProSiteProfiles Protein kinase domain profile. 25 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0216 401 Gene3D Transferase(Phosphotransferase) domain 1 108 316 - -
Mch9g0216 401 Gene3D Phosphorylase Kinase; domain 1 2 107 - -
Mch9g0216 401 SUPERFAMILY Protein kinase-like (PK-like) 8 304 IPR011009 -
Mch9g0216 401 CDD STKc_IRAK 31 304 - -
Mch9g0216 401 Pfam Protein tyrosine and serine/threonine kinase 28 303 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0216 401 FunFam Serine/threonine-protein kinase BIK1 1 107 - -
Mch9g0216 401 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 108 315 - -
Mch9g0216 401 MobiDBLite consensus disorder prediction 325 359 - -
Mch9g0216 401 MobiDBLite consensus disorder prediction 325 372 - -
Mch9g0216 401 PANTHER OS01G0588500 PROTEIN-RELATED 8 306 IPR050823 -
Mch9g0216 401 PIRSF TyrPK_CSF1-R 21 122 - -
Mch9g0216 401 PIRSF TyrPK_CSF1-R 121 230 - -
Mch9g0216 401 PIRSF TyrPK_CSF1-R 270 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0216 Mch-Chr9:1630856 Mch9g2164 Mch-Chr9:22324118 9.13E-107 dispersed
Mch11g0459 Mch-Chr11:2900962 Mch9g0216 Mch-Chr9:1630856 1.93E-129 wgd
Mch6g0978 Mch-Chr6:6907427 Mch9g0216 Mch-Chr9:1630856 5.15E-152 wgd
Mch8g3249 Mch-Chr8:34453422 Mch9g0216 Mch-Chr9:1630856 9.69E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77662 PF07714 PK_Tyr_Ser-Thr 5.70E-45 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0216 - - - 0.0