Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0222 CCAAACCACCCTTCAGATCACATATTGGACTGGTTAGAGGATTCAGCTCCTTTCTTTTCCCCATTCCTGGACGAGACTTACAACTCTAGCTCTATAAACTGCTATCAATGGTGGGATGAGAGCCAAAACATAGGCCAAGATCTGATTAATGGCTGTCTCAGTAGCTCCCCTGCCGCTGCCACCACAGACAGTACTACACCACCAAACACTACCAGTTTGACGCCATCGGATTTGTCAAAGAAAAGGAAAGCCCCAGATGACACAGGTCATAAGACAACACAACCCCATCAGAACCCAAGGAAGAACCAGAACAATCAGAGCAAAAATGGTGCAGATAAAGGCGGTGGGGGGGTGGTAAAGAAGTCAGTGGGGAACAAGAAAAGTTCATCAAAATCCACAGGAAATAATTATAATAACGGAAGTAACAAGGAAGGAAGGTGGGCGGAGCAATTGCTAAATCCCTGTGCAAATGCTATCATAAAAGGAGATGCGACACGAGTACATCACCTTATTTGTGTTCTGCAAGAGCTCGCTTCCCCCACCGGCGACGCCAATCACCGGCTCGCCGATCATGGTCTCCGAGCTCTGGCCCATCACCTGTCCTCCAATTCATCATCTTCTTCTTCCACACTTGCGCCGGTGGTTAATTTCGCTTCGACGGACGCGCGATTCTTCCAGCGGTCGTTGATCAAATTCCACGAGGTGAGTCCCTGGTTTGCTCTTCCGAACAACATCGCGAATTCTTCAATCCTCCACACTCTCTCTGAAGAACCTAATCTCTCGCGCAATCTTCACATTCTTGACATTGGGGTTTCTCACGGTGTGCAATGGCCGACGCTGCTCGAGGCCTTGACTCGCCGTTCCGGTGGGCCTCCGCCGCTAATTCGGCTCACAGTTGTCGCTCCCACCGTCGAACACGACCAAACTGCGGAGACGCCGTTCTCCATTGGTCCACCGGGAGACAACATCTCCTCTCGGCTACTTAGTTTCGCCAAATCCTTGAACATCAATTTACAGATCAACCGCCTCGACAATCACTCGTTACAGAACTTAAATTCGCAAGTAATCGGTAAGTTCCGGGACGAAATTTTGATCGTTTGCGCACACTTCAGACTCCACCAGTTGAAACACCGCGCTCCAGACGAAAGAACAGAGTTCCTACGAAATCTGAGAAAAATGGAGCCAAATGCAGTGATTCTGAGCGAAAACAACATAGCATGTAGCTGCAGCAACTGCGGGAATTTCGACATCACATTCACTCGGCGAGTGGAGTACTTGTGGAGGTTTCTGGACTCGACGAGCTCCGCATTCAAAGGGCGAGAAAGCGACGAAAGAAGAGTGATGGAAGGAGAGGCGGCGAAGGCGTTGACGAATCAGGGCGAAATGAACGAGGAAAAGGAGAAATGGTACGAGAGAATGAGAAATGCAGGATTCGCTAGAAAATTCTTCGCAGAAGACACCATTGATACGGCTCGAGCTTCCATGAGAAGATATGACAATAACTGGGAAATGAGAATGGAAGAGAAAGATGGATGCGTGGGGTTATGGTGGAAAGGGCAGCCAATTTCGTTTTGTTCGTTTTGGAAA 1587 49.02 PNHPSDHILDWLEDSAPFFSPFLDETYNSSSINCYQWWDESQNIGQDLINGCLSSSPAAATTDSTTPPNTTSLTPSDLSKKRKAPDDTGHKTTQPHQNPRKNQNNQSKNGADKGGGGVVKKSVGNKKSSSKSTGNNYNNGSNKEGRWAEQLLNPCANAIIKGDATRVHHLICVLQELASPTGDANHRLADHGLRALAHHLSSNSSSSSSTLAPVVNFASTDARFFQRSLIKFHEVSPWFALPNNIANSSILHTLSEEPNLSRNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLIRLTVVAPTVEHDQTAETPFSIGPPGDNISSRLLSFAKSLNINLQINRLDNHSLQNLNSQVIGKFRDEILIVCAHFRLHQLKHRAPDERTEFLRNLRKMEPNAVILSENNIACSCSNCGNFDITFTRRVEYLWRFLDSTSSAFKGRESDERRVMEGEAAKALTNQGEMNEEKEKWYERMRNAGFARKFFAEDTIDTARASMRRYDNNWEMRMEEKDGCVGLWWKGQPISFCSFWK 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1668858 1670444 - MC09g0189 Mch9g0222 697104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0222 529 MobiDBLite consensus disorder prediction 95 111 - -
Mch9g0222 529 Pfam GRAS domain family 149 529 IPR005202 -
Mch9g0222 529 MobiDBLite consensus disorder prediction 79 94 - -
Mch9g0222 529 MobiDBLite consensus disorder prediction 58 144 - -
Mch9g0222 529 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 124 528 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Mch9g0222 529 ProSiteProfiles GRAS family profile. 139 529 IPR005202 -
Mch9g0222 529 MobiDBLite consensus disorder prediction 58 78 - -
Mch9g0222 529 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch7g0125 Mch-Chr7:1544238 Mch9g0222 Mch-Chr9:1668858 2.91E-41 dispersed
Mch9g0222 Mch-Chr9:1668858 Mch9g1016 Mch-Chr9:8838642 1.19E-07 dispersed
Mch9g0222 Mch-Chr9:1668858 Mch5g1847 Mch-Chr5:18703155 5.58E-16 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
43987 PF03514 GRAS 5.70E-75 CL0063 Mch TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0222 K27744 - csv:101211590 823.157