Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0239 ATGGCAGCTCCCATGTCTGAAGAAGAAGCTAACGATTCCTTTACCGCCTCCAACACGGTGATCGCCATTAACAGAGACAAGAATAGCCAATTCGCGGTTAAATGGGCGGTGGAAAACCTTTTCAACAGGAAGAACGCCGGCGAATGCATCCTCATCCACGTACGGAGCCAGAGCTTGCATCCCCAGGATGCTGAAACGGTTCCTAAGGAGTTTCGTCCACCGACTGAAGCTGAGTTGCACCAGTTCTTCCTTCCCTACCGAGGATTCTGCGCGCGAAAAGGGATAGTTGCAAAGGAGCTTATCATCCATGACATTGATGTTCCAAGTGCACTTATTGACTATATCAGTAACCACTCCATTAGCAATATTGTTGTGGGTGCTTCCAGCCGGAATGCTATTATGAGGAAGTTCAAACATCCAGATGTCCCGACATGCTTACTCAAATCGACTCCAGAAACATGTTCTGTATATGTCATAGCTAAAGGAAAAGTTCATACTAAGAGATTGAGAAAACGCCGTAAGGGACAATCTGGGCCAGATACACCAACTGGAACTCCACATATTCAAAGGTCTCTATCGAAAATACAGCAAGGCTTCTCTGCAGATAACATCAGGCATCATTCTGCCATCAGTAGTGATTCACTATCAGGCAACAGTGACTTTTCGGGGCCTTTCAGTTTCAAATCAACTGAAACATCCTCTGATAACTTAAATTTTTCCTTAACCTCATCAGAGACTGGTTCGAGGAGCTTCGTTTCCTCTTATACCACATCTTCCATAGAATCTGAGATGAGAAAGCTGAAGTTTGATCTAAAAAAGACGATGGAAACGTATGACTCAGCTTGCAAGGAAGCTGTAGTAGCAAACCAAAAGGCAAGTGAACTCCAACAATTGAAGATGGAAGAAGAGAAAAAGTTTGAGCGAGGTAGATCTGCAGAAGAGGCTCTAACAATATTAGCAGAGGTTGAGAAGCAGAAGAGCAAGGCTGCAACAGAAGCAGCTCTAATGGCACAAAAGCTGGCAGAATTGGAGACCAAGAAAAAACAAAAAATTGCTGAAATGAAGGCTAAGAGTAAGGAAGAGGAGAAGAAGAAAACAATTGAGTTATTTGAACGCAGTAATATCTGCTATAGACGATACAGCATTCAAGAGATTGAAACTGCAACAGATCATTTTAACGAGTCAAAAAAGATTGGTGAAGGTGGATACGGACCTGTTTACCAAGCCTTACTCGATCATACTTCTGTTGCCATTAAGATCTTGAGACCAGATCTATCTCACGGGCAGAGACAATTCCAGCAAGAGATTGAGGTTTTAAGCCGCATGAGGCATCCGCACATGGTTCTTCTGCTAGGTGCCTGCCCAGAAAGTGGTTGCCTTGTTTATGAATATATGGAAAACGGGAGCTTAGAAGACCGTCTTTTCCGAAAAGATAACACTCCTTCAATCCCTTGGGGAACCCGTTTCAAGATAGCTTGTGACATTGCCACTGCCCTCCTCTTCCTACATCAAATGAAGCCAGAACCCGTGGTGCATCGTGACCTCAAGCCAGCCAACATCCTTTTAGATCACAACTATGTGAGCAAAATAGGCGATGTGGGTTTGGCCAGGCTAGTTCCACCGTCGGTTTCCGATAGCGTCACTCAATACCACATGACAGCTGCAGCTGGAACCTTCTGTTACATTGACCCAGAATACCAGCAAACAGGAATGTTGGGTGTGAAATCAGATATTTACTCATTTGGTGTTCTGCTGCTCCAGCTTATCACTGCAAAGTCACCAATGGGTCTTTCATATCAGGTTGAGGAGGCCATTGAACATGGCACATTTCCGGAAATACTTGATCCTACAGTTACAGATTGGCCCATTGAAGACACTCTTGGACTTGCTAAATTAGCCCTCCAGTGTTGTGAGCTAAGAAAAAGAGACAGGCCCGACCTCGGTACAGTTCTATTGCCAGAATTGATCAGGCTAAGAGATCTTGGATTGAGCAAAGCACCGAATGGCAAGCCCCCAATTGTCGGGGAAGCTCGTGATCAGCGGGCTTATAACTCGGTTCCAAATTTCAAGGGATCATCAGAAGATGAGATCAATGTGAGAAAAAGATGGCAACGATTGAAATTCAGTACGAGATTATGGAGCCGAAAGGGTATTTCTTTGAATGCCATTTCTCCGCAGATAAAGAAAAAATGGATCTCGAAGAACAGTGATGCAAAATCCTTGACCATACCACTGAGTGGAAAAGGAGTTGATGAAATGGGCGAGAAGCACCAAAACTCTGAGCGTTATTGTTGGTCGTTTGCAAGCTGTGCTTCTGCTGCTGCTTCGGGGTTTAAAAAACTACACTCATTTTCATAA 2358 44.27 MAAPMSEEEANDSFTASNTVIAINRDKNSQFAVKWAVENLFNRKNAGECILIHVRSQSLHPQDAETVPKEFRPPTEAELHQFFLPYRGFCARKGIVAKELIIHDIDVPSALIDYISNHSISNIVVGASSRNAIMRKFKHPDVPTCLLKSTPETCSVYVIAKGKVHTKRLRKRRKGQSGPDTPTGTPHIQRSLSKIQQGFSADNIRHHSAISSDSLSGNSDFSGPFSFKSTETSSDNLNFSLTSSETGSRSFVSSYTTSSIESEMRKLKFDLKKTMETYDSACKEAVVANQKASELQQLKMEEEKKFERGRSAEEALTILAEVEKQKSKAATEAALMAQKLAELETKKKQKIAEMKAKSKEEEKKKTIELFERSNICYRRYSIQEIETATDHFNESKKIGEGGYGPVYQALLDHTSVAIKILRPDLSHGQRQFQQEIEVLSRMRHPHMVLLLGACPESGCLVYEYMENGSLEDRLFRKDNTPSIPWGTRFKIACDIATALLFLHQMKPEPVVHRDLKPANILLDHNYVSKIGDVGLARLVPPSVSDSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITAKSPMGLSYQVEEAIEHGTFPEILDPTVTDWPIEDTLGLAKLALQCCELRKRDRPDLGTVLLPELIRLRDLGLSKAPNGKPPIVGEARDQRAYNSVPNFKGSSEDEINVRKRWQRLKFSTRLWSRKGISLNAISPQIKKKWISKNSDAKSLTIPLSGKGVDEMGEKHQNSERYCWSFASCASAAASGFKKLHSFS 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1808550 1813248 + MC09g_new0035 Mch9g0239 697121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0239 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0239 785 SMART serkin_6 392 656 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0239 785 Pfam Protein kinase domain 393 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0239 785 Coils Coil 285 305 - -
Mch9g0239 785 Gene3D Phosphorylase Kinase; domain 1 370 464 - -
Mch9g0239 785 Pfam Universal stress protein family 20 135 IPR006016 -
Mch9g0239 785 CDD STK_N 19 162 - -
Mch9g0239 785 Coils Coil 312 364 - -
Mch9g0239 785 Gene3D HUPs 6 161 IPR014729 -
Mch9g0239 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 158 - -
Mch9g0239 785 SUPERFAMILY Protein kinase-like (PK-like) 372 651 IPR011009 -
Mch9g0239 785 ProSiteProfiles Protein kinase domain profile. 392 656 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0239 785 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 364 464 - -
Mch9g0239 785 Gene3D Transferase(Phosphotransferase) domain 1 465 660 - -
Mch9g0239 785 PANTHER OS02G0152300 PROTEIN 21 673 IPR051348 -
Mch9g0239 785 MobiDBLite consensus disorder prediction 167 188 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g2590 Mch-Chr8:29058551 Mch9g0239 Mch-Chr9:1808550 2.60E-187 dispersed
Mch9g0239 Mch-Chr9:1808550 Mch3g1625 Mch-Chr3:18060927 1.42E-56 dispersed
Mch3g0284 Mch-Chr3:3974723 Mch9g0239 Mch-Chr9:1808550 3.21E-27 transposed
Mch8g0558 Mch-Chr8:4007667 Mch9g0239 Mch-Chr9:1808550 1.46E-222 wgd
Mch8g3226 Mch-Chr8:34326654 Mch9g0239 Mch-Chr9:1808550 7.76E-131 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77663 PF00069 Pkinase 3.50E-41 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0239 - - - 0.0