Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0241 ATGAAGATGAAAATTGAGTCAATTAAACGGGGAAGAATAAGAGACAGGATTCGTAGAAGCCATCTCTACACATTCTCATGCCTCCGGGCAGTAAAAAGTGTGCGTCAGGCTGACGATTCGAATCCTTTAACAGGACCCGGCTTCTCACGAACTGTGTGTTGCAACCAACCTCATCTCCATGACAGGAAGCCATTGAAATACTGCGCGAATTACATATCCACGACCAAGTATAATGTTCTTACTTTCTTGCCTAAGGCTCTATTTGAGCAGTTCCGGCGGGTTGCCAATGTGTACTTTCTTATGGCTGCATTGTTATCGCTCACACCAGTTGCCCCATTTTCTGCGATGAGCATGATTGCTCCTTTGGTATTTGTTGTCGGGCTCAGTATGCTTAAAGAAGCTCTTGAGGACTGGCGTCGATTTGTGCAGGACATGAAGGTTAATCTCAGGAAAGTTAGTGTCCATAAAGGGGACGGTGTATTTGGCTACAGACCTTGGCACCAGATTCGAGTTGGAGATATAGTTAAAGTAGAGAAAGATCAGTTTTTTCCAGCTGATTTGTTTCTCCTGTCATCGTGCTATGAGGACGGTATATGTTATGTCGAAACAATGAATTTGGATGGTGAGACTAATCTCAAAGTAAAAAGATCTTTGGAAGTAACCTTACCATTGGATGATGATGCAACTTTCAAAGATTTTACTGGAAAAATTTACTGTGAGGATCCGAACCCTAATCTTTACACCTTCGTAGGCAATTTTGAGTACGACCGGCAGATTTATCCTCTTGATCCTAGTCAGATCCTCCTCAGAGATTCAAAATTGAGGAATACAGCTTATGCCTATGGGGTGGTGGTATTTACTGGACATGATAGCAAAGTGATGCAGAATGCTACTAAATCTCCTTCAAAAAGAAGTAGAATAGAGAGACAAATGGACAAAATTATTTACATCCTTTTTACTCTCCTTGTACTGATCTCACTAATCAGCTCAATAGGTTTTGCTGTGAAGACAAAGTACGAAATGACAGACTGGTGGTATTTACAAACTACTGGTGATGATCCATTGTACAATCCTCGTAAGGCAGCCTTATCAGGGCTCCTACATTTAATCACTGCTCTTATTCTGTATGGATACTTGATACCCATCTCGCTCTATGTTTCCATCGAGGTTGTTAAGGTTTTGCAAGCTTCCTTCATTAACCAAGATATTAACATGTATGATGAAGAGACTGCAAATACCGCTCGAGCTCGAACTTCAAATTTGAATGAGGAGTTGGGCCAGGTAGACACAATCCTCTCTGACAAAACTGGCACTTTGACTTGCAATCAGATGGACTTTCTGAAATGTTCCATTGCTGGCACTGCATATGGTGTTAAAGCTAGTGAGGTTGAACTTGCAGCAGCAAGGCAGATGGCACATGACCTCGAGGAGCAGGATGGAGAAGATTTCGATACTCCCTCACAAAAAGGTGGACAGCCTTCCATGCCAAATAGCAGAAGAGAGTCTGAGATCGAACTGGAGACTGTTGTTACTTCAAGCGATTCCAAGGATCAGAAGCCTGCCATTAAGTATTTTAGTTTTGAGGACAGCCGCCTAACGGGTGGGAACTGGTTGAATGAGCCGCATCGTGATGATATTCTATTATTCTTCCGAATTTTAGGAATTTGTCACACTGCAATTCCTGAACTGAATGAAGAGACTGGTGTTTATACGTATGAAGCAGAGTCCCCCGATGAAGGTGCTTTCCTTGTTGCAGCCAGAGAATTTGGTTTTGAATTTTGTAAGAGAACACAATCAAGCTTAGTTGTCCGCGAGAAATATCCTTCACCTACCCAAATAGTTGAAAGGGAATACAAAATTTTGAATCTTTTGGATTTCACAAGCAAGAGAAAGAGAATGTCTGTGATTATTAGGGACGAGAGTGGCCAGATTCTTCTTCTCTGCAAAGGTGCTGATAGCATCATCTTTGATCGACTGGCAAAGAACGGAAGAACATATGAGGAAGCAACCACAAAGCATTTGAATGAATATGGAGAAGCTGGGCTGCGTACTCTGGCACTTGCTTATAGGAAGCTTGAGGAGTCCGAATATACTGCTTGGAACAATGAGTTTCAGAAGGCTAAGACATCCATCGGAGGAGATAGAGATGCAATGCTCGAGCGAGTATCCGACCTCATGGAGCGAGAATTAACCCTTGTTGGTGCTACCGCTGTGGAGGACAAGTTACAGAATGGGGTACCCCAATGCATAGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTTTTGACAGGGGATAAGATGGAAACTGCCATCAACATAGGATTTGCATGTAGTTTACTACGACAGGGGATGAAGCAGATCTGCATATCAACAAACGCAGATGCCTTAGCCCAGGATAGCAAAGAGGCCGTGAGAGAGAATATTTTGAATCAAATCACCAACGCCACCCAAATGATCAAGCTCGAGAAGGATCCACATGCTGCATTTGCTTTAATCATTGATGGGAAGACTCTAACCTATGCTCTCGAGGATGATATGAAGTATCAGTTCCTTGGACTCGCAGTCGATTGTGCATCCGTCATTTGCTGTCGTGTCTCCCCCAAGCAGAAGGCACTGGTAACAAGGTTAGTGAAAGAAGGTACAGGGAAAGCCACTTTAGCAATTGGTGATGGTGCAAACGATGTCGGAATGATTCAAGAGGCTGATATTGGCGTCGGTATCAGTGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGACTTCTCTATTGCTCAATTTCGGTTTCTGGAAAGGCTTCTGGTAGTCCATGGTCATTGGTGCTACAAGAGGATAGCACAAATGATTTGCTATTTCTTCTACAAGAACATTGCATTTGGATTAACACTGTTCTACTTCGAAGCATTCACGGGCTTTTCCGGGCAATCAATTTACGATGATTTCTATATGCTATCATTTAACGTCATACTCACCTCATTGCCTGTAATTTCTCTTGGAGTGTTTGAACAAGATGTCCCTTCTGAGGTTTGCCTACAGTTCCCTGCGCTGTACCAGCAAGGACCCCGAAACTTGTTCTTCGACTGGCCTCGAATTTTCGGATGGATGGGGAACGCTCTCTATTCCTCTCTGGTTACCTTCTTCCTCAATCTCCTCATCTTCTACGACCAGGCATTCCGCTCGGAAGGCCAGACCGCCGATATGACCGCTGTAGGCACCACCATGTTCACTTGCATCATATGGGCAGTCAATTGCCAGATTGCCCTCACAATGAGCCACTTCACCTGGATCCAACACGTTCTTGTCTGGGGCAGCATCTCCATGTGGTATATCTTCATCGTACTTTATGGAATGATAATATCCTCTGGAAATGCATATCAAATCTTTCTTGAAGCACTCAGCCCTGCCCCTATTTACTGGATAGCCACCATACTAGTCACAATCACATGCAATCTCCCATATCTTGCCCACATCTCCTTCCAGAGAAGCTTTAATCCTCTGGATCATCATATTATCCAAGAAATCAAATACTACAGAAAGGATGTGGAAGACAAACACATGTGGACCAGGGAGAGATCAAAGGCAAGGCAAAAGACCAAGATAGGATTCACAGCCAGAGTAGAAGCATCCATCAGGCAGTTGAAAGGAAGGCTGCAAAAGAAGCACTCCATGATAAATGCTGCTGCTGCTACATCATGA 3696 43.72 MKMKIESIKRGRIRDRIRRSHLYTFSCLRAVKSVRQADDSNPLTGPGFSRTVCCNQPHLHDRKPLKYCANYISTTKYNVLTFLPKALFEQFRRVANVYFLMAALLSLTPVAPFSAMSMIAPLVFVVGLSMLKEALEDWRRFVQDMKVNLRKVSVHKGDGVFGYRPWHQIRVGDIVKVEKDQFFPADLFLLSSCYEDGICYVETMNLDGETNLKVKRSLEVTLPLDDDATFKDFTGKIYCEDPNPNLYTFVGNFEYDRQIYPLDPSQILLRDSKLRNTAYAYGVVVFTGHDSKVMQNATKSPSKRSRIERQMDKIIYILFTLLVLISLISSIGFAVKTKYEMTDWWYLQTTGDDPLYNPRKAALSGLLHLITALILYGYLIPISLYVSIEVVKVLQASFINQDINMYDEETANTARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVKASEVELAAARQMAHDLEEQDGEDFDTPSQKGGQPSMPNSRRESEIELETVVTSSDSKDQKPAIKYFSFEDSRLTGGNWLNEPHRDDILLFFRILGICHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCKRTQSSLVVREKYPSPTQIVEREYKILNLLDFTSKRKRMSVIIRDESGQILLLCKGADSIIFDRLAKNGRTYEEATTKHLNEYGEAGLRTLALAYRKLEESEYTAWNNEFQKAKTSIGGDRDAMLERVSDLMERELTLVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICISTNADALAQDSKEAVRENILNQITNATQMIKLEKDPHAAFALIIDGKTLTYALEDDMKYQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKATLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSIYDDFYMLSFNVILTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLFFDWPRIFGWMGNALYSSLVTFFLNLLIFYDQAFRSEGQTADMTAVGTTMFTCIIWAVNCQIALTMSHFTWIQHVLVWGSISMWYIFIVLYGMIISSGNAYQIFLEALSPAPIYWIATILVTITCNLPYLAHISFQRSFNPLDHHIIQEIKYYRKDVEDKHMWTRERSKARQKTKIGFTARVEASIRQLKGRLQKKHSMINAAAATS 1231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1822816 1830716 - MC09g0205 Mch9g0241 697123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0241 1231 PRINTS P-type cation-transporting ATPase superfamily signature 889 908 - -
Mch9g0241 1231 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Mch9g0241 1231 FunFam Phospholipid-transporting ATPase 600 731 - -
Mch9g0241 1231 SFLD Haloacid Dehalogenase 416 940 - -
Mch9g0241 1231 Pfam Cation transport ATPase (P-type) 555 659 - -
Mch9g0241 1231 Gene3D - 598 732 IPR023299 GO:0000166(InterPro)
Mch9g0241 1231 Coils Coil 458 478 - -
Mch9g0241 1231 NCBIfam HAD-IC family P-type ATPase 861 970 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Mch9g0241 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 1156 IPR023298 -
Mch9g0241 1231 CDD P-type_ATPase_APLT_Dnf-like 70 1048 - -
Mch9g0241 1231 Gene3D - 442 466 IPR023299 GO:0000166(InterPro)
Mch9g0241 1231 Gene3D - 128 299 - -
Mch9g0241 1231 MobiDBLite consensus disorder prediction 485 499 - -
Mch9g0241 1231 FunFam Phospholipid-transporting ATPase 128 298 - -
Mch9g0241 1231 SFLD p-type atpase 416 940 IPR044492 -
Mch9g0241 1231 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 46 1179 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Mch9g0241 1231 SUPERFAMILY HAD-like 420 933 IPR036412 -
Mch9g0241 1231 Gene3D - 429 441 IPR023214 -
Mch9g0241 1231 MobiDBLite consensus disorder prediction 478 503 - -
Mch9g0241 1231 NCBIfam phospholipid-translocating P-type ATPase 67 1173 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Mch9g0241 1231 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 532 695 IPR023299 GO:0000166(InterPro)
Mch9g0241 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Mch9g0241 1231 Pfam Phospholipid-translocating ATPase N-terminal 54 119 IPR032631 -
Mch9g0241 1231 Gene3D - 733 929 IPR023214 -
Mch9g0241 1231 SUPERFAMILY Calcium ATPase, transduction domain A 157 297 IPR008250 -
Mch9g0241 1231 Pfam Phospholipid-translocating P-type ATPase C-terminal 917 1165 IPR032630 -
Mch9g0241 1231 FunFam Phospholipid-transporting ATPase 733 929 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch4g1104 Mch-Chr4:10847867 Mch9g0241 Mch-Chr9:1822816 0 dispersed
Mch9g0241 Mch-Chr9:1822816 Mch9g2015 Mch-Chr9:21431339 0 dispersed
Mch9g0241 Mch-Chr9:1822816 Mch3g1659 Mch-Chr3:18321366 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0241 K01530 - csv:101221220 2232.22