Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mch9g0252 | AGAGATCCGATGGGAACTGCAGAAATCTCCTCTGAATTTGGGGCTCGGATGGGGTTTCGTTTGCTCTTTCTGCTGTTTGAAATTTGGTTTGCTGTCTGCTCTTTCTCGGCCTGTGAAGCTGCTGCAGTCATCCTCCCGAGCAGGCCGAGCAGATTGCGTTCTGTACTTGCAGACCATGGCGTCTCTCCAACATCTCATGACTTTGGCAGCAAACACCATGGCAAGTTCGACAATGCAGTTCCTAGCAAACCATTTAAAAGTTCATCTCCTCAGATCCACTCTCATTATAGAGCCATTCAATCCGACGATTCGAGAAGGGCTCCTAGCATTGCGCTTCCACCTTCTGCACCTGCTAAGAAATGGGTGCACGGTCATGCATTCTCACCAGTGATCTCTTTTCATAAATTTCACCATTCGAGAAGGAAGTTCAGAAACGACGCTCCACAACCTACTTATCATTCATCGCCCCCATCTAGCGGCGAACAAGGCCCTGCTGCTGTCTCTCCGATTCAGTCACCGTTATCATCTGCAGCGAGAGGGAGATTGCACGGACCTGCGCCATCACCAACAATTCAACCTAACCACTATTATATGCCCATTCCTGCTCCTACAACTTCTCCTTTGGGTTCTTACAAGAAGAGGAAGAAGAGCATGCCACCATCACAAGTTATGATGCTACCACCTCCACCTCCTAATGGGGACTGTGGAATAGCATGCACAGACCCACTGACCTATACGCCTCCTGGGATGCCATGTGCTTGCGTGTGGCCAATTCAAGTGAAAATCAGCCTTGATGTTGCTATATACACATTCTTCCCTCTGGTTTCAGAACTTGCAGAGGAAATTGCAGACAGTATCGGTCTGAACCATAGCCAAGTTCGAATTATGGGAGCCGATGCTGCTAGTCAGCAGTTAGAAAAGACAACCGTACTCATCAACTTGGTTCCAAGAGGGTTGAAATTCAATCATACCACGGCCTTTTCCATCTATCAGAAGTTTTGGCAGAGAAAGATATTCATCAACTCTTCCCTGTTTGGCAGCTATCAAGTACTTAATGTCAAATATCCAGGTCTTCCGCCATCCCCTCCTTCAGCGCCTTCGGGTACTTCTGCCATTAATGATGGTTTGAACTCTAGCAATGCTAATGCTGGAAATGCGATAAAACCGTTGGGAGTTGACGTGCCGAGAAGAAGAAGAAAAGAAGGGCTTGGCGGAAACATGATTGCCGTGATTACAATATCATCTTTCACTGCCTTTGTTATGTGCGTTGGAATTGCTTGGCTCTGCCTGTTGAGATGCAGAGTCTCTGCACATCAACCAGGACAAGTTCCACAAAACTTGATAGCCTCACCCACAAAACCACCAGGCACTGCTGGATCGATAATGGTTGGATGTGAACCCAGTTCTTCATCCATGCCTCTTGATGCTGATCCCATGACTTATATCGGTGCTGCAAAGAACTTCACCTTGAAAGATATTGAGAGAGCCACTGATAAGTTTGATGCTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTTTACAGTGGCAGTTTGGATGATGGAAGGGAAGTGGCCGTGAAGGTTCTCAAAAGACATAATCAACACGGTATTCGGGAATTCTTGGCAGAAGTCGAGATGCTGAGCCGTCTACACCATCGAAATCTAGTTAAGTTGATCGGTATCTGTACAGAAGATCAAATTCGTTGCCTGGTATATGAATTGGTTCCTAATGGAAGTGTCGAATCGCACTTACATGGCATTGACAAGTTAACCGGTCCACTTGACTGGGATGCCCGGATGAAGATTGCCCTCGGTGCTGCTCGAGGCCTAGCCTATCTGCATGAAGACTCCAATCCTCGAGTCATTCATCGAGACTTCAAAGCTAGCAACATCTTGCTGGAATACGACTTTACGCCTAAAGTTTCTGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACCCATGTCATGGGAACTTTTGGTTATCTAGCTCCAGAATATGCAATGACAGGCCATCTTCTTGTAAAGAGTGATGTCTACAGTTATGGCGTTGTCCTTCTCGAGCTACTAACAGGAAGAAAGCCAGTTGACTTGTCGCTTCCACCCGGGCAAGAAAATCTCGTTGCTTGGGCTCGTCCGCTTCTTACAAGCAAGGAGGGGTTAGATGCAATAACAGACCCAGCTATTAAGTCCAATATCCCCATTGATAGCTTGGCAAGAGTAGCAGCAATTGCTTCAATGTGTGTGCAACCCGAAGTGTCTCATCGGCCATTTATGGGCGAGGTTGTTCAAGCTCTCAAGCTTGTTTGCAATGAGTTTGAAGAGACTAATGAGCCAGATTCACAAAGTTACAGTCGAGACGAACTTCTAAGTTACATGGATAGTAGACTTGGAAGAATGTCAGGTGAAATACTAAACACTTTCGAGACCTCACAACCGAAGGAGACAAATGTGGGATTATCGGCCTCGGATTTGATCAGTGCATCTGCAAGATTCGAAGGACAGGAACTGGTTTCTTCCAGATGGCATTCGTCAAACTCGGAACCATTGAGAACTGGAAAAAGAAGGCACTTCTGGCAGAGGCTGAGAAGTTTGTCACGAGGCAGCATCAGTGAACATGGCTTTTCTTCAAAGTTTTGGCCTGGATTTCATTAG | 2676 | 46.3 | RDPMGTAEISSEFGARMGFRLLFLLFEIWFAVCSFSACEAAAVILPSRPSRLRSVLADHGVSPTSHDFGSKHHGKFDNAVPSKPFKSSSPQIHSHYRAIQSDDSRRAPSIALPPSAPAKKWVHGHAFSPVISFHKFHHSRRKFRNDAPQPTYHSSPPSSGEQGPAAVSPIQSPLSSAARGRLHGPAPSPTIQPNHYYMPIPAPTTSPLGSYKKRKKSMPPSQVMMLPPPPPNGDCGIACTDPLTYTPPGMPCACVWPIQVKISLDVAIYTFFPLVSELAEEIADSIGLNHSQVRIMGADAASQQLEKTTVLINLVPRGLKFNHTTAFSIYQKFWQRKIFINSSLFGSYQVLNVKYPGLPPSPPSAPSGTSAINDGLNSSNANAGNAIKPLGVDVPRRRRKEGLGGNMIAVITISSFTAFVMCVGIAWLCLLRCRVSAHQPGQVPQNLIASPTKPPGTAGSIMVGCEPSSSSMPLDADPMTYIGAAKNFTLKDIERATDKFDAARILGEGGFGIVYSGSLDDGREVAVKVLKRHNQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTGPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVAWARPLLTSKEGLDAITDPAIKSNIPIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFEETNEPDSQSYSRDELLSYMDSRLGRMSGEILNTFETSQPKETNVGLSASDLISASARFEGQELVSSRWHSSNSEPLRTGKRRHFWQRLRSLSRGSISEHGFSSKFWPGFH | 891 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1887559 | 1893169 | + | MC09g0211 | Mch9g0252 | 697134 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mch9g0252 | 891 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 576 | 794 | - | - | |
Mch9g0252 | 891 | FunFam | receptor-like serine/threonine-protein kinase ALE2 | 474 | 575 | - | - | |
Mch9g0252 | 891 | ProSiteProfiles | Protein kinase domain profile. | 500 | 781 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Mch9g0252 | 891 | CDD | STKc_IRAK | 506 | 774 | - | - | |
Mch9g0252 | 891 | Gene3D | Phosphorylase Kinase; domain 1 | 471 | 575 | - | - | |
Mch9g0252 | 891 | MobiDBLite | consensus disorder prediction | 144 | 199 | - | - | |
Mch9g0252 | 891 | PANTHER | OS01G0750732 PROTEIN | 236 | 807 | IPR050885 | - | |
Mch9g0252 | 891 | ProSitePatterns | Protein kinases ATP-binding region signature. | 506 | 528 | IPR017441 | GO:0005524(InterPro) | |
Mch9g0252 | 891 | Pfam | Protein tyrosine and serine/threonine kinase | 503 | 773 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0252 | 891 | Gene3D | Transferase(Phosphotransferase) domain 1 | 576 | 797 | - | - | |
Mch9g0252 | 891 | MobiDBLite | consensus disorder prediction | 148 | 175 | - | - | |
Mch9g0252 | 891 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 622 | 634 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Mch9g0252 | 891 | SUPERFAMILY | Protein kinase-like (PK-like) | 480 | 773 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Mch6g2305 | Mch-Chr6:25035360 | Mch9g0252 | Mch-Chr9:1887559 | 1.89E-197 | dispersed | |
Mch9g0252 | Mch-Chr9:1887559 | Mch9g1622 | Mch-Chr9:18385833 | 2.00E-93 | dispersed | |
Mch8g2131 | Mch-Chr8:24431334 | Mch9g0252 | Mch-Chr9:1887559 | 2.06E-118 | transposed | |
Mch6g0923 | Mch-Chr6:6498503 | Mch9g0252 | Mch-Chr9:1887559 | 2.03E-246 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
77664 | PF07714 | PK_Tyr_Ser-Thr | 1.30E-47 | CL0016 | Mch | PK |
Pathway information
