Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0259 ATGGACAGTTTGTGGGATGTTGTGGTAGTGACAGCCATTTTCTTGGCCACCATTATTGTCTACTGCAGCTTTTCTAGACTCCTCAGATCAAACATCTGCACCCAACTCCCTTTAGGCACTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTTGGCTTATTCCGACCGCCCCGAGACCTTCATGGACAAGCGCCGCCGCCTGTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGGTCATTCTGCAGAGTGATGCTAAGGCTTTTGTACCGTCTTACCCGAGATCGTTGACGGAATTGATGGGAAAGTCTTCCATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATCCATGGTCTTGTGGGAGCTTTCTTCAAGTCTCCACATCTCAAAGCTCAAATAACCAAGGATATGGAAAGTTATGTCAAATTATCTATGGCAAATTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGCAAAGATATTGATCAATTTACATCCTGGTCAAAGGATGGAGTTTCTCAAGCAACAGTTCCAAGAATTCATTGCTGGGCTTATGGCTTTCCCAGTGAACATCCCCGGAAGCAGGCTTTACCGATCGCTGCAGGCAAGTTGCTCAAAAAGGAATATGGTAAAACTAGTAAAGAAGATGATACAAGAAAGAAAAAGCAGTGGCATTTCCCCTGTCCCAAAAGATGTGATGGAAGTTTTGCTCAAAGATGAAAGTGAACAACTAACAGACGATCTAATTTCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTCCCAATCTTAATGACCCTTGCCGTAAAATACCTCTCCGATTGCCCGGCCGCTCTTCAACAGTTAACGGAGGAAAACTTGAAGGTGAAAAGACAGAAAGAGCAGCTCGGAGAGCCGTTGCATTGGAGCGATTACTTATCGCTGCCATTTACGCAGAGCGTGATCACAGAGACTCTAAGGATGGGAAACATCATAACCGGGGTGATGCGGAAGGCCATGAAAGACATCGAGATAAAAGGGTACTTAATACCGAAAGGTTGGTCGGTGCTTACGTACTTTAGATCTGTTCATCTCGACGACAATCACTATGACTGGCCTTACAAATTCAATCCATGGAGGTGGCAGGATAGAGACTTGAGCAGTTGTAACTTCACTCCTTTTGGAGGTGGACAGAGACTATGCCCTGGACTTGACTTGGCCAGGCTTGAAGCTTCCATATTCCTTCATCACTTTGTCACTCAGTTCAGATGGATGGATGAGGAAGATAGAATCATCAACTTCCCCACAGTGAGAATGAAGAGGAGAATGCCAGTTTGGGTGGAGAGGCGAAGGGATCCATGA 1434 44.42 MDSLWDVVVVTAIFLATIIVYCSFSRLLRSNICTQLPLGTLGWPFIGETIEFISLAYSDRPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKVILQSDAKAFVPSYPRSLTELMGKSSILLINGSLQKRIHGLVGAFFKSPHLKAQITKDMESYVKLSMANWTENNPIYLQDETKNISFQVLAKILINLHPGQRMEFLKQQFQEFIAGLMAFPVNIPGSRLYRSLQASCSKRNMVKLVKKMIQERKSSGISPVPKDVMEVLLKDESEQLTDDLISENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKVKRQKEQLGEPLHWSDYLSLPFTQSVITETLRMGNIITGVMRKAMKDIEIKGYLIPKGWSVLTYFRSVHLDDNHYDWPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWMDEEDRIINFPTVRMKRRMPVWVERRRDP 477
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 1937654 1941394 + MC09g0218 Mch9g0259 697141
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0259 477 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 28 474 - -
Mch9g0259 477 Pfam Cytochrome P450 38 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 418 427 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Mch9g0259 477 PRINTS P450 superfamily signature 416 425 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 PRINTS P450 superfamily signature 142 155 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 PRINTS P450 superfamily signature 425 436 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 PANTHER CYTOCHROME P450 26 35 450 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER)
Mch9g0259 477 Gene3D Cytochrome P450 29 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 CDD CYP90-like 68 473 - -
Mch9g0259 477 SUPERFAMILY Cytochrome P450 35 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 PRINTS E-class P450 group I signature 415 425 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 PRINTS E-class P450 group I signature 425 448 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Mch9g0259 477 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch9g0259 Mch-Chr9:1937654 Mch9g1476 Mch-Chr9:17187767 5.76E-119 dispersed
Mch10g1461 Mch-Chr10:14513278 Mch9g0259 Mch-Chr9:1937654 6.09E-80 transposed
Mch1g1548 Mch-Chr1:16785275 Mch9g0259 Mch-Chr9:1937654 2.47E-163 transposed
Mch4g2380 Mch-Chr4:24956251 Mch9g0259 Mch-Chr9:1937654 8.55E-99 transposed
Mch7g1280 Mch-Chr7:16283943 Mch9g0259 Mch-Chr9:1937654 1.25E-83 transposed
Mch8g1252 Mch-Chr8:9026890 Mch9g0259 Mch-Chr9:1937654 1.45E-235 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0259 K12638 - csv:101217830 808.905