Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mch9g0259 | ATGGACAGTTTGTGGGATGTTGTGGTAGTGACAGCCATTTTCTTGGCCACCATTATTGTCTACTGCAGCTTTTCTAGACTCCTCAGATCAAACATCTGCACCCAACTCCCTTTAGGCACTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTTGGCTTATTCCGACCGCCCCGAGACCTTCATGGACAAGCGCCGCCGCCTGTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGGTCATTCTGCAGAGTGATGCTAAGGCTTTTGTACCGTCTTACCCGAGATCGTTGACGGAATTGATGGGAAAGTCTTCCATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATCCATGGTCTTGTGGGAGCTTTCTTCAAGTCTCCACATCTCAAAGCTCAAATAACCAAGGATATGGAAAGTTATGTCAAATTATCTATGGCAAATTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGCAAAGATATTGATCAATTTACATCCTGGTCAAAGGATGGAGTTTCTCAAGCAACAGTTCCAAGAATTCATTGCTGGGCTTATGGCTTTCCCAGTGAACATCCCCGGAAGCAGGCTTTACCGATCGCTGCAGGCAAGTTGCTCAAAAAGGAATATGGTAAAACTAGTAAAGAAGATGATACAAGAAAGAAAAAGCAGTGGCATTTCCCCTGTCCCAAAAGATGTGATGGAAGTTTTGCTCAAAGATGAAAGTGAACAACTAACAGACGATCTAATTTCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTCCCAATCTTAATGACCCTTGCCGTAAAATACCTCTCCGATTGCCCGGCCGCTCTTCAACAGTTAACGGAGGAAAACTTGAAGGTGAAAAGACAGAAAGAGCAGCTCGGAGAGCCGTTGCATTGGAGCGATTACTTATCGCTGCCATTTACGCAGAGCGTGATCACAGAGACTCTAAGGATGGGAAACATCATAACCGGGGTGATGCGGAAGGCCATGAAAGACATCGAGATAAAAGGGTACTTAATACCGAAAGGTTGGTCGGTGCTTACGTACTTTAGATCTGTTCATCTCGACGACAATCACTATGACTGGCCTTACAAATTCAATCCATGGAGGTGGCAGGATAGAGACTTGAGCAGTTGTAACTTCACTCCTTTTGGAGGTGGACAGAGACTATGCCCTGGACTTGACTTGGCCAGGCTTGAAGCTTCCATATTCCTTCATCACTTTGTCACTCAGTTCAGATGGATGGATGAGGAAGATAGAATCATCAACTTCCCCACAGTGAGAATGAAGAGGAGAATGCCAGTTTGGGTGGAGAGGCGAAGGGATCCATGA | 1434 | 44.42 | MDSLWDVVVVTAIFLATIIVYCSFSRLLRSNICTQLPLGTLGWPFIGETIEFISLAYSDRPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKVILQSDAKAFVPSYPRSLTELMGKSSILLINGSLQKRIHGLVGAFFKSPHLKAQITKDMESYVKLSMANWTENNPIYLQDETKNISFQVLAKILINLHPGQRMEFLKQQFQEFIAGLMAFPVNIPGSRLYRSLQASCSKRNMVKLVKKMIQERKSSGISPVPKDVMEVLLKDESEQLTDDLISENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKVKRQKEQLGEPLHWSDYLSLPFTQSVITETLRMGNIITGVMRKAMKDIEIKGYLIPKGWSVLTYFRSVHLDDNHYDWPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWMDEEDRIINFPTVRMKRRMPVWVERRRDP | 477 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 1937654 | 1941394 | + | MC09g0218 | Mch9g0259 | 697141 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mch9g0259 | 477 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 28 | 474 | - | - | |
| Mch9g0259 | 477 | Pfam | Cytochrome P450 | 38 | 453 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 418 | 427 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Mch9g0259 | 477 | PRINTS | P450 superfamily signature | 416 | 425 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | PRINTS | P450 superfamily signature | 344 | 355 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | PRINTS | P450 superfamily signature | 142 | 155 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | PRINTS | P450 superfamily signature | 425 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | PANTHER | CYTOCHROME P450 26 | 35 | 450 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Mch9g0259 | 477 | Gene3D | Cytochrome P450 | 29 | 474 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | CDD | CYP90-like | 68 | 473 | - | - | |
| Mch9g0259 | 477 | SUPERFAMILY | Cytochrome P450 | 35 | 474 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | PRINTS | E-class P450 group I signature | 415 | 425 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | PRINTS | E-class P450 group I signature | 425 | 448 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | PRINTS | E-class P450 group I signature | 343 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | PRINTS | E-class P450 group I signature | 383 | 407 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Mch9g0259 | 477 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Mch9g0259 | Mch-Chr9:1937654 | Mch9g1476 | Mch-Chr9:17187767 | 5.76E-119 | dispersed | |
| Mch10g1461 | Mch-Chr10:14513278 | Mch9g0259 | Mch-Chr9:1937654 | 6.09E-80 | transposed | |
| Mch1g1548 | Mch-Chr1:16785275 | Mch9g0259 | Mch-Chr9:1937654 | 2.47E-163 | transposed | |
| Mch4g2380 | Mch-Chr4:24956251 | Mch9g0259 | Mch-Chr9:1937654 | 8.55E-99 | transposed | |
| Mch7g1280 | Mch-Chr7:16283943 | Mch9g0259 | Mch-Chr9:1937654 | 1.25E-83 | transposed | |
| Mch8g1252 | Mch-Chr8:9026890 | Mch9g0259 | Mch-Chr9:1937654 | 1.45E-235 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mch9g0259 | K12638 | - | csv:101217830 | 808.905 |