Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0282 AAAAGGCGACAATTTACATTTTCAGAAGTCTTGAAGATGACAAAAAATTTTGAGAGAGTTCTAGGCAAAGGAGGTTTCGGGATGGTTTACTACGGCCTTATAGACGATGTTCAAGTGGCTGTGAAGTTACTTTCCCAAGCATCAGATCAAGGTTATCAACAGTTTCAAGCAGAGGCACTTCACCATAAAAACTTGACTAGTCTTGTGGGGTATTTGAATGAAGGAGACCACCTTGGCCTCATTTATGAGTTCATGAAAAATGGAAACCTAGCGGAGCATCTTTCAGAGAGGAGTAATCGTATCTTAAGCTGGGAAGACAGACTTCGAATAGCAATGGATGCAGCTCAAGGATTGGAGTACCTGCACTATGGTTGTAAGCCACCCATTGTCCACAGAGATGTCAAAACAACGAACATCTTGTTGACAGAGAATTTGCAAGGAAAACTTGCAGATTTTGGTCTGTCCAAAAGCTTCCCCATAGATGGCAAAACCCACGTGTCCACAGTTGTTGCTGGCACTCCTGGTTACCTCGATCCCGAGTACTACGTATCGAACAGGCTGACAGAGAAAAGCGATGTGTACAGCTTCGGGATTGCGCTATTGGAGATAATCAGTTGCAGACCAGTAATATCAAGAACCGAAGATACACCTCATATAGCTAGATGGGTGAACTCCTTGGTTTCCCAAGGAGATATTCAGAACATAGTTGATCCAAGATTGCAAGGACAGTATGAAACTAACTCTGTTTGGAAAGCGGTGGAAGTAGCGATGGCTTGTGTAGCGGCGAACTCCAGTAGAAGGCCGACGATGAGCGAGGTTGTGGCAGAACTCAAGGATTGCTTGGGCACGGAATTGAATCGGAGGACGGAGAATCGTTCGCTGAATTCGACGGATTCCACTGAAATGAGGTCCATGTCTGTGGCTTTCAATGCTTCCGAATCCCGTCCCCAGGCAAGGTGA 960 45.42 KRRQFTFSEVLKMTKNFERVLGKGGFGMVYYGLIDDVQVAVKLLSQASDQGYQQFQAEALHHKNLTSLVGYLNEGDHLGLIYEFMKNGNLAEHLSERSNRILSWEDRLRIAMDAAQGLEYLHYGCKPPIVHRDVKTTNILLTENLQGKLADFGLSKSFPIDGKTHVSTVVAGTPGYLDPEYYVSNRLTEKSDVYSFGIALLEIISCRPVISRTEDTPHIARWVNSLVSQGDIQNIVDPRLQGQYETNSVWKAVEVAMACVAANSSRRPTMSEVVAELKDCLGTELNRRTENRSLNSTDSTEMRSMSVAFNASESRPQAR 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2106827 2115115 - MC09g0235 Mch9g0282 697164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0282 319 ProSitePatterns Protein kinases ATP-binding region signature. 21 42 IPR017441 GO:0005524(InterPro)
Mch9g0282 319 SMART serkin_6 15 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0282 319 Pfam Protein tyrosine and serine/threonine kinase 17 277 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0282 319 Gene3D Phosphorylase Kinase; domain 1 2 84 - -
Mch9g0282 319 ProSiteProfiles Protein kinase domain profile. 15 281 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0282 319 PANTHER OS07G0107800 PROTEIN-RELATED 1 287 - -
Mch9g0282 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0282 319 PIRSF TyrPK_CSF1-R 81 209 - -
Mch9g0282 319 PIRSF TyrPK_CSF1-R 241 318 - -
Mch9g0282 319 PIRSF TyrPK_CSF1-R 12 94 - -
Mch9g0282 319 Gene3D Transferase(Phosphotransferase) domain 1 85 304 - -
Mch9g0282 319 MobiDBLite consensus disorder prediction 288 319 - -
Mch9g0282 319 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 85 290 - -
Mch9g0282 319 SUPERFAMILY Protein kinase-like (PK-like) 3 277 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch8g1233 Mch-Chr8:8863792 Mch9g0282 Mch-Chr9:2106827 4.94E-114 dispersed
Mch8g1234 Mch-Chr8:8867655 Mch9g0282 Mch-Chr9:2106827 3.96E-119 dispersed
Mch9g0282 Mch-Chr9:2106827 Mch9g0284 Mch-Chr9:2119528 4.00E-157 dispersed
Mch9g0281 Mch-Chr9:2099760 Mch9g0282 Mch-Chr9:2106827 1.72E-46 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77666 PF07714 PK_Tyr_Ser-Thr 3.40E-43 CL0016 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0282 - - - 0.0