Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mch9g0284 ATGGATGTTTTAGAACATTTGATCTTGGCTTTTCTGGGTGGTCTAGCTCTTGTCAATCTTGTTCAATCTCAAGGTCAAATAGGTTTCATAAGCTTAGATTGTGGATTAGCAGCAAATACGAGCTACATTGAACCAACATTAATGCTTCGATTCACTTCTGATGCTGATTATATAAACAGCGGTGTAAGCAAAAGCTTATCCTCTAATTATCAACAATATATTCCACGACAGTATCATTATGTTAGAAGCTTCACCCAAGGATTGAGGAACTGTTACAATATAAGCGTTCAGGAAAACACCAATTATTTGATGCGAGCAAGTTTCTTGTATGGAAATTACGATGGACTCGGTCAACTGCCGATATTCGATATCTACTTTGGAGATAGCTTATGGATGACAGTGAATATTACTGATGAAAACACATATACCACAATAGATTCTATTCATGTGACCTCAAACAATCAAGTACATATTTGTCTTGTCAACACAAACAATGGGATTCCTTTCATCTCTTCATTAGAATTTAGACCATTGCCCAATGAGACTTATAAGGTCTTGACAAGATCCCTGCTGCTTTACCGTCGATACGATTATGGTACAACAGCAAATACAATCTATAGGTTTCCTGATGATATCTATGATCGCTATTGGATACCTTACAACAAGCCTGAATGGGGAAGCATAAGTACCAATCAGACAATAGATTCTGTGTATAACAATTTTTATCAGCCAGGGACTGTTGTCATGGGAACAGCAGCTACTCAAAAAGATGTAAACAAGCCCATAGAGATCGAGTGGGAGCCAGAAGATGAAAACACCCAATATTATGTATACATGCACTTTGCTGAAGTTGTAGATCTGAAAGCCAATAAGAGTTTTAGAGGATTCAACGTCACCTATAATGAGAGTTTTTGGTACGGTCCCCTCATTCCTCCTCCCTTGAGTACGATAACGCTTTACAGTACAGGACCAATAACGACAGTGCCAACCAAAAAGCATCTATTCTCATTTGTTCCTATTGAAAATTCAACGCTCCCTCCAATCATAAATGCTATAGAAATCTATTCCGTGATAAATCTCTCAGAACTAACATCAGACCAAGGAGATGTGGATGCAATCAAAAGCATCAAGTCAACTTATGGAATAGTCAAAGATTGGGAAGGAGATCCATGCGTTCCAAGAGCACAACCTTGGGAGGGTATAGATTGTACCAAAACCAATGAAACTGCTCCTAGAATTTTGTCTTTGAATTTGTCATCAAGTGGATTGACAGGGATTATTTCTCCAATGATATTCAATCTAGAAATGTTACAAATCTTGGACTTGTCTAACAACGACTTGACAGGAAATATCCCTGATTTTCTGTCTAATTTATCAAACCTTGTAGTCCTAAATTTAGAGAACAACAAGTTCACAGGATCTGTTCCATCTGAACTCATTAGGAGATTCAATAACGGTTCATTATCGTTAAGTGTTGAAGGGAATCCAAATCTAGATTGTATATCAGATTCATGCAAGAGTAAGAAGAACAATGTCATTATTCCAATAGTAGCATCAATTGGCGGATTGATAGTCATTGCTGTAATTGCAATGACCTTCTTTTGGATTGTTAAATCGAGGAAGAGAGGACAAAATGAAAACGGAGTTTCAAAGACAGATCGCTCGGAAACCAACAATCAATTAAGTGACTTGTTGGAGACAAAGAGGAGACAATTTACATATTCAGAAGTCTTGAGGATGACAAACAATTTTGAGAGAATTCTAGGCAAAGGAGGTTTCGGGATGGTTTACTATGGTCTCATGGACAACACTCAAGTGGCTGTGAAGATACTTTCTCAAGCATCAGGTCAAGGTTACCAACAGTTTCAAGCAGAGGCATACCTCGTGGGGTATTTGAATGAAGGAGACCGCCTCGGCCTCATTTATGAGTTCATGGCCAATGGAAACTTAGCAGAGCATCTTTCAGAGAAGAGTTCACATGTCTTAAGTTGGCAAGATAGACTCCGGATAGCCATGGATGCAGCACAAGGATTGGAGTACCTGCATGATGGTTGCAAGCCCCCTATAATCCACCGAGACGTGAAAACAACAAACATCTTGTTGACAGAGAATTTCCAAGCCAAACTTGCAGATTTTGGTTTGTCCAAGAGCTTCCCAACAGATGGGAACAACAACAACAGCAACTACATGTCCACCATTGTTGCTGGTACTCCCGGTTACCTTGATCCAGAGTACTACATATCGAACCGGCTGACGGAGAAAAGTGATGTGTACAGCTTCGGGATTGCTCTGCTGGAGATAATCAGCTGCAGACCAGTGATATCAAGAAATGAAGAGAACGCCCATATCAGCAAGTGGGCGAACACCATGGTGGCTCAAGGGGACATTAACGGAATAGCGGACGAAAGATTGAGAGGAAATTATGATGTGAACTCGGTTTGGAAGGCGGTGGAAATAGCGATGAATTGTTTAGCGGGTAGCCCCGGTAGAAGACCGACGATGGGGCAAGTGGTGGCGGAACTGAAGAATTGCTTGGCCATGGAATTGGAACGGACGCCGGAAAGTCGAGGGTTCGATTCGACGAATTCGGGTAATATGATGTCCATTGTTATGGATTACGGTGGATCCGTTCCAATGGCGAGGTGA 2646 40.78 MDVLEHLILAFLGGLALVNLVQSQGQIGFISLDCGLAANTSYIEPTLMLRFTSDADYINSGVSKSLSSNYQQYIPRQYHYVRSFTQGLRNCYNISVQENTNYLMRASFLYGNYDGLGQLPIFDIYFGDSLWMTVNITDENTYTTIDSIHVTSNNQVHICLVNTNNGIPFISSLEFRPLPNETYKVLTRSLLLYRRYDYGTTANTIYRFPDDIYDRYWIPYNKPEWGSISTNQTIDSVYNNFYQPGTVVMGTAATQKDVNKPIEIEWEPEDENTQYYVYMHFAEVVDLKANKSFRGFNVTYNESFWYGPLIPPPLSTITLYSTGPITTVPTKKHLFSFVPIENSTLPPIINAIEIYSVINLSELTSDQGDVDAIKSIKSTYGIVKDWEGDPCVPRAQPWEGIDCTKTNETAPRILSLNLSSSGLTGIISPMIFNLEMLQILDLSNNDLTGNIPDFLSNLSNLVVLNLENNKFTGSVPSELIRRFNNGSLSLSVEGNPNLDCISDSCKSKKNNVIIPIVASIGGLIVIAVIAMTFFWIVKSRKRGQNENGVSKTDRSETNNQLSDLLETKRRQFTYSEVLRMTNNFERILGKGGFGMVYYGLMDNTQVAVKILSQASGQGYQQFQAEAYLVGYLNEGDRLGLIYEFMANGNLAEHLSEKSSHVLSWQDRLRIAMDAAQGLEYLHDGCKPPIIHRDVKTTNILLTENFQAKLADFGLSKSFPTDGNNNNSNYMSTIVAGTPGYLDPEYYISNRLTEKSDVYSFGIALLEIISCRPVISRNEENAHISKWANTMVAQGDINGIADERLRGNYDVNSVWKAVEIAMNCLAGSPGRRPTMGQVVAELKNCLAMELERTPESRGFDSTNSGNMMSIVMDYGGSVPMAR 881
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2119528 2123299 - MC09g_new0049 Mch9g0284 697166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mch9g0284 881 Pfam Leucine Rich Repeat 437 458 IPR001611 GO:0005515(InterPro)
Mch9g0284 881 Pfam Leucine Rich Repeat 460 479 IPR001611 GO:0005515(InterPro)
Mch9g0284 881 Pfam Malectin-like domain 32 357 IPR024788 -
Mch9g0284 881 ProSitePatterns Protein kinases ATP-binding region signature. 588 609 IPR017441 GO:0005524(InterPro)
Mch9g0284 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 689 701 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0284 881 FunFam Leucine-rich repeat receptor-like kinase 369 501 - -
Mch9g0284 881 Gene3D Phosphorylase Kinase; domain 1 564 644 - -
Mch9g0284 881 Gene3D Transferase(Phosphotransferase) domain 1 645 860 - -
Mch9g0284 881 SUPERFAMILY L domain-like 374 482 - -
Mch9g0284 881 SMART serkin_6 582 845 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0284 881 ProSiteProfiles Leucine-rich repeat profile. 436 459 IPR001611 GO:0005515(InterPro)
Mch9g0284 881 PANTHER OS07G0107800 PROTEIN-RELATED 21 849 - -
Mch9g0284 881 Pfam Protein tyrosine and serine/threonine kinase 584 841 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Mch9g0284 881 ProSiteProfiles Protein kinase domain profile. 582 845 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Mch9g0284 881 SUPERFAMILY Protein kinase-like (PK-like) 559 841 IPR011009 -
Mch9g0284 881 Gene3D Ribonuclease Inhibitor 370 498 IPR032675 -
Mch9g0284 881 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 645 853 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Mch11g0927 Mch-Chr11:6349053 Mch9g0284 Mch-Chr9:2119528 1.17E-225 dispersed
Mch8g1235 Mch-Chr8:8880273 Mch9g0284 Mch-Chr9:2119528 1.06E-163 dispersed
Mch9g0279 Mch-Chr9:2087901 Mch9g0284 Mch-Chr9:2119528 6.72E-170 dispersed
Mch9g0280 Mch-Chr9:2094773 Mch9g0284 Mch-Chr9:2119528 1.33E-141 dispersed
Mch9g0281 Mch-Chr9:2099760 Mch9g0284 Mch-Chr9:2119528 2.53E-34 dispersed
Mch9g0282 Mch-Chr9:2106827 Mch9g0284 Mch-Chr9:2119528 4.00E-157 dispersed
Mch9g0284 Mch-Chr9:2119528 Mch9g0292 Mch-Chr9:2172293 1.19E-251 dispersed
Mch9g0284 Mch-Chr9:2119528 Mch9g0286 Mch-Chr9:2131811 1.28E-170 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
77667 PF12819 Malectin_like 2.20E-102 CL0202 Mch PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mch9g0284 - - - 0.0